Oncorhynchus mykiss (rainbow trout): 110496375
Help
Entry
110496375 CDS
T07259
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase isoform X1
KO
K15732
RNA polymerase II subunit A C-terminal domain phosphatase [EC:
3.1.3.16
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
omy01009
]
110496375
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
omy03021
]
110496375
Enzymes [BR:
omy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
110496375
Protein phosphatases and associated proteins [BR:
omy01009
]
HAD phosphatases
Fcp/Scp phosphatases
110496375
Transcription machinery [BR:
omy03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
110496375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCP1_C
BSH_Fcp1
NIF
PTCB-BRCT
BRCT
RTT107_BRCT_5
Motif
Other DBs
NCBI-GeneID:
110496375
NCBI-ProteinID:
XP_036808831
Ensembl:
ENSOMYG00000032573
UniProt:
A0A8C7SQ98
LinkDB
All DBs
Position
18:complement(45911856..46028798)
Genome browser
AA seq
1046 aa
AA seq
DB search
MEEPADSGGGGAAQGPMAQVAEIRCPIAARPMRLLEWKVKPGSLVNVDSVLALCAPIPPE
KESGSHPPEQPNRLSEKKLKSDRAGVVKELCCQLGQVISPGVVVVRVEECSHPIVMKGLC
AECGQDLTQMQTNNGRQQALISTANVSMVHSVPELMVSSEQAEQLGREDQQRLHRNKKLV
LMVDLDQTLIHTTEHHCQLMSNKGIFHFQLGRGEPMLHTRLRPHCKDFLEKIAKLYELHV
FTFGSRLYAHTIAGFLDPEMKLFSHRILSRDECIDPFSKTGNLRNLFPCGDSMVCIIDDR
EDVWKFAPNLITVKKYIYFKGTGDINAPAGSKEAQQGRKAGSQASRPAEASEPAVTSGTT
GPKTGPSGGSSASEEQSNGLKKQRAKDHNNGGRGESTAPSATQGSAANERTQPDGGEAVE
EERGQGEGAEASAAAQVSDRMHVKDEMKAEGNGEGKDGSRTLGSGEEAPPPGGVNSSSTP
LPPSSTPPDLHEPNSNLDFDLSSDSDADSLTGKPTSSDNERDGVSSQTKKSKQEGAEQAA
VEEPSGGAGGREGENSSAVVGETSDETSGSEVVFPPDPEQENGRLERREAETESQNSEQS
GVTMGEESLDPSMEEEEEEEKEEVDVDKDDHLIYLEEVLERIHGEYYARYNAFLGKERPE
MPDIRKIVPELKARSLEGTTIVFSGLYPTNYPMERTRENYHAKALGAKIGKGLLLRSKDP
GRTTHLIAARAGTEKVRQAQGCKHLHVVNPDWLWGCLERWERVEESLYPLKEDYTKTQRS
NSPVTFPDLQGSFQNPRFPPAPLHHHPPAAPEVRTYDPVTGKLIRRGTQASRPPSYLQAS
MSSAHGDQTSLRGGQKDQQGETAGPSSRDDEQPGPSCRRRERQPSMSETNPLYTFCKEDL
DSMDKEVDDMLDEESDEEGDGRGKKTREMEEEEEMEEEAEGQRPQSSGQSTEGEKQHHEQ
QQHHHHHHQPGLATVIEETEKAQMPPSDQGDMTTGSVPRGQKRKLEEEEGESADESTKDS
NEEEEGSSSEADEMAAALDAELNDFM
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcccgcagattccggcggtggcggggcagcacagggccccatggcgcaagtg
gcggagatccgctgcccaatagcagcgcgtcctatgcggctgctggaatggaaagtcaaa
cccggttccctcgtcaatgtggactcggtattggcgttatgtgctcccatcccaccggag
aaagagtccgggtcccatccgccagaacagcccaatcggctgtcagagaagaagctgaaa
tcggaccgagctggagtggtgaaagagctatgctgtcaacttggacaagtcatatcgcct
ggtgttgtggttgtaagagtagaagaatgcagccatcccattgtgatgaagggcctgtgt
gctgaatgtggccaggacctcacacagatgcagaccaataatgggaggcagcaggctctc
atctccacggcaaatgtttccatggtgcacagtgtccctgagttgatggtcagctctgag
caagcagagcagctgggcagagaggaccagcagagactccacaggaacaagaagctggtt
ctgatggttgatctggaccagaccctgatccacaccaccgagcatcactgccagctcatg
tccaacaagggaatcttccatttccagctggggcggggggagcccatgttacacacgcga
ctgcgtccgcactgcaaagacttcctggagaagatcgccaagctctacgagctgcacgtc
ttcaccttcggaagccgcctctatgcacacaccatcgcaggcttcctggaccctgagatg
aagctgttttcccacaggatcctgtccagagacgaatgcatcgaccccttctccaagaca
gggaacctgaggaatctgttcccatgtggggactcgatggtatgtattatagatgaccgg
gaggacgtgtggaagtttgctcccaacctgatcactgtgaagaaatacatctacttcaag
gggacaggagacatcaacgccccggccgggtctaaagaggctcagcagggaaggaaagca
ggcagccaggccagccgaccagcagaggcctcagaaccagcagtaacgtcagggacaaca
gggcctaaaacagggccatctggggggtcgtctgcatcagaggagcagagtaatggtctt
aagaaacaacgggccaaagaccacaacaatggagggaggggggagtcaacagcaccctca
gccactcagggttcagcagccaatgaacggactcaaccggacggtggcgaggctgtggag
gaggagcggggtcagggcgagggagccgaggccagcgcggcagcacaggtgagcgacagg
atgcatgtgaaagatgagatgaaagcggaggggaatggagaggggaaggatggcagcagg
acattgggctcaggggaggaagctccccctccgggtggggtgaactcatcctccactcct
cttcctccatcatccactcctccagacctccatgaacccaacagcaacctggactttgac
ctgtccagcgacagtgacgctgactctcttacgggtaaacccacctcatcagacaacgag
agggacggggtgtccagccagaccaagaagtccaaacaggaaggggcggagcaggcagca
gtagaggagccatcaggtggggctggaggaagggagggtgagaacagctccgcggtagta
ggggagacctcagatgagacatctgggtcagaggttgtcttccctccagacccggagcag
gagaacgggcgcttagagcggagggaggctgagacagagtcccagaacagtgaacagtca
ggagtcaccatgggggaggagtctctggacccgagcatggaggaggaggaagaggaagag
aaagaggaggtggacgtggacaaggatgaccacctcatctacctagaagaggtgctggag
cgtatccatggagagtactacgcccgctacaacgcctttctcgggaaggaacgcccagag
atgcctgacatcaggaagatcgtcccggagctgaaggcccggagcctggagggcaccacc
attgtgttctctggactgtaccccaccaattaccccatggagagaaccagggagaattac
cacgccaaggccctgggagcaaagataggaaagggcctcctgctccgctctaaagaccct
ggcagaaccacacacctcattgctgctagagcaggtacagagaaggtgcgtcaggcccaa
ggctgtaaacatctccatgtggtgaatcctgactggctgtggggatgtctcgagcgctgg
gagagggtggaggaatcactgtatccactgaaggaggactacaccaagacccaacggagc
aacagcccagtcacgttccctgacctccaagggtccttccagaacccccggttccccccc
gcccccctccaccaccaccctccagctgcccctgaggtgcggacgtacgacccagtcacg
gggaagctgattcgccgtgggactcaggcctccagaccaccatcttacctccaggcctcc
atgtcttctgcccatggcgaccagacctcgctcagggggggtcagaaggaccaacagggg
gagacggcgggtccctccagtcgagacgacgagcagcctggaccctcctgccggcggagg
gaacgccagcccagcatgtcagagaccaaccccctctacacattctgtaaagaagacctg
gacagcatggacaaggaggtggacgacatgctagatgaggagagcgatgaggagggagat
ggccgggggaagaagacaagggagatggaggaggaagaggagatggaggaggaagcagag
gggcagcgtccccagagtagtggacagagcactgagggagagaagcagcaccacgagcag
cagcagcaccaccaccaccaccaccaaccgggtctggccaccgttatagaggagacggag
aaggcacagatgccacctagtgaccagggcgatatgacgacgggtagcgtgccaagggga
cagaagcgcaagcttgaggaggaagagggggagtcggcggacgagtccaccaaggattct
aacgaggaagaggaaggaagcagctcagaggctgatgagatggccgctgccctggatgcg
gagcttaacgacttcatgtga
DBGET
integrated database retrieval system
