Oncorhynchus mykiss (rainbow trout): 110496395
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Entry
110496395 CDS
T07259
Name
(RefSeq) AT-rich interactive domain-containing protein 1A isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110496395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110496395
03021 Transcription machinery [BR:
omy03021
]
110496395
03036 Chromosome and associated proteins [BR:
omy03036
]
110496395
Transcription factors [BR:
omy03000
]
Eukaryotic type
Helix-turn-helix
ARID
110496395
Transcription machinery [BR:
omy03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
110496395
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
110496395
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
110496395
NCBI-ProteinID:
XP_021427945
Ensembl:
ENSOMYG00000006633
UniProt:
A0A8C7NW73
LinkDB
All DBs
Position
18:47405537..47517686
Genome browser
AA seq
2281 aa
AA seq
DB search
MAAQVASVAILNTSPPSELKKPDRDPLEESVPGEKQHENKEPGSDNGSPGQKDLQDGADA
GNVGGGGEPDMKNGNSSRVNNNNNQNDTGGPEGNNHPGMGHHHQGSFPPPPYGYNQHYSR
GSFHQHGGQQSPGMAAAAGPAVQSGNMMDPYPPNSQDHGFPNHFNNYSPFPNRTSYQGQG
YAMNSPRNNQPPAAGGQPGKQQPAGGTTAMAASYNNQRYNMGNTQPTSTPTLNQLLTSPS
STRSYQNYPQGDYSNQEGAGKGAADMASSQYGGGHPGWQQRSHQPPPMSPGNTGQPLNRN
QPPSPMDHVGKMRGSGYGGANPYSQQQGQGQGPPPPGAQQGASYSGQGYGPPGPQRYPMG
MQGRTPTGMAGMQYGQQMAGFGQQGPGGFGQQSQGYYSQHGPPPHAGQQQAPYPQQVHPS
QGQGPPQGGPPQAQPPYNQGPTQPPQQPGPQQGQSGPSYPQQQGPPGQQPPQQQPPSQQQ
GPPQQQQDRAAPPQAQPLPGHQQPPVHQPPPGHQSSPGPQGQHPSPSHSGPPQQQGQSQQ
GQPSPYSQTPPLQQQGQSQQGQPSPYSQTPPLQQQSPFHGFPPPPQELSQDSFSSQSSAP
PSNQPTTSNKSGTEDSMQGRPSSLPDLSGSIDDLPTGTEGALSPGVSTSGVSSSQGEQSN
PAQSPFSPHTSPHLPGIRGPSPSPVGSPASVTPSRSGPLSPAAVPGNQMPPRPPSVHSDG
ILHTSMGQSAMGQDRVYMRNPQMPPHGSPQQPGSALSPRQSSGGQMLPGMGPYPQNNSMG
NYGPQGGQYGPQGYPRQPGYSGMPNANYPGGPGGMPGQAGGAPYAGMPPGRMGPGQMAAR
PYGPGMGPNMGPGMPPQVTSGMCPPPGMNRKGPGGPPDVASTMHHGANSILNRPPGYPPN
MPQGMMGAGPPYGPGPGAINSMQGMMNQGGPYGGGPMGGNMANNTPGMAPSPEFGIDVKL
NPAQKMNNKLDGTSKPETKKVKKKSNSSTTTNEKITRLYELGPEPERRTWVDRYLAFAEE
KATGMTNLPAVGRKPLDLFRLYVSVKEIGGLTQVNKNKKWRELSTNLNVGTSSSAASSLK
KQYIQCLYAFECKIERGEDPPPDLFIDAKKTTQPKIQPPSPAGSGSLQGPQTPQSTSSSM
AEGGDLKPPTPASTPHSQMPPMPVRLQDPFADGGDPAFARRNSMTPNSYQPGMGGPEMMG
HMGPYESNKDPFGGMRKAGEQFMTPGPGSNSGMEGQFNRGPPGPNMQMGPRQQYPYGPGY
DRRQEPGMGPDGSMGPGAPQPNLMPSGADSGMYSPSRPPPQQRHDSYGNQYPGQGVPPGG
PYPNQQPGMFPQQQPNYKRPPVDGAYGPPAKRHEGDGMYNVPFSGQQPGPQPSGGPQVQQ
DMYNQYNAGYPGSDRRPPGPQGQFPFPFGRDRGPSSGVPNSQSSLPPQMMGSPMQAAPDG
PQGPMWQGRNEMGYPNYPNRQGPPGPGQGPPQGYHGMNRSEEMMPGADQRMNHESQWPGH
PSQRQSPYGPGGSGPPMSRPLQSNYQSSQNHISQVSSPAPMPRPMESRTSPSKSPYMHSG
IKMQKAGPPVPASHIGQAPVQPPLIRRDISFPPGSVEASQPILKPRGRLTMKDIGTPEAW
RVMMSLKSGLLAESTWALDTINILLYDDNSISTFNLCQLPGFLELVVEYFRRCLIQIFGI
LKEYEVGDPGQRTLTDPYAADEDWSDEELPEQEDMEEEEDEEEDDERKSNADTTTSSQQV
QVKKEEEEEKSTPEKSTAEEEEREGGESSSTSSPPQNLSLLQEKPKQASKFDKLPIKMVR
KKDPFPGGRSSKLGRRQSFDSGLIHWSIGGGDTTEHIQTHFESRSDLLKQRKQVLPSAAE
SRKVAVPPTVSENPEETTKPGKEEQTTKTSTPTTPAPVTATIDDVLSARPGSVTEEAVRG
AAEEQKENRGRFLYSLRQAQQSRRNITILEDEPHSKDETALSTLSDWQDALAHRCVCVSN
IVRSLSFIPGNDLEMSKHPGLLLLLGSLVLLHHRHPERKQAPVTYEKEKEEDEDERMSCE
RDEWWWDCLEVLRENCLVTLANISGQLDLSIYPESICLPLLDGLLHWAVCPSAEALDPFP
MLGPHGALSPQRLVLETLSKLSIQDNNVDLILATPPFSRLEKLYGTLVRLVGERKVAVCR
EMSVVLLANLAQGDSMAARAIAVQKASVGNLLGFLEDSLAATQYQQSQSSLMHLQGAHFE
PTSVDMMRRAARALHAMAKVEENHSEFTLYESRLLDISVSPLMNSLVSHVICDVLFLIGQ
S
NT seq
6846 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcaggtcgctagcgtcgccattctcaacactagccctccatccgaacttaaa
aagccggatcgggacccactggaggagtcggtaccgggagagaaacaacatgaaaataag
gaacctggatctgacaacggatctccgggccagaaggatctgcaggacggggccgatgct
ggaaatgtagggggaggaggggagcctgacatgaagaacgggaactcgtccagggtgaat
aataataacaaccaaaatgatacgggggggccggaggggaataaccaccccgggatgggc
catcaccaccagggctcattccctccacctccttacgggtacaaccagcactacagccgg
ggctcttttcatcaacatggcggacaacaaagccctggcatggcagctgcagcggggccg
gcagtgcagtcaggcaacatgatggacccatacccgcccaactcacaagaccacggcttc
cccaaccattttaacaactacagccccttcccgaaccggacttcttatcagggccaagga
tacgccatgaattccccgcgtaataaccagcccccggcggctggggggcagccaggcaag
caacagccagcaggcggaactacagccatggctgcctcgtacaataatcagaggtataac
atgggaaacacacagcccacgtctaccccgacattaaatcagctcctaacgtctcccagc
tctacgaggagctaccagaattacccacaaggagactatagtaaccaggaaggggctggc
aagggagcagcagatatggccagcagtcagtatggtgggggtcatcctggttggcaacaa
aggagccaccagccgcctcctatgagcccagggaacacgggacaacctctgaacagaaac
cagccccccagccctatggaccatgtagggaagatgcggggctcggggtacggtggagcc
aacccctactcccagcagcaaggccaggggcagggccctcctcctccaggggcccaacag
ggtgcctcctactcaggccagggctatggacccccggggcctcaaaggtatcctatgggc
atgcagggacgcacccccaccggcatggctggcatgcaatacggacaacagatggccggc
tttgggcagcagggtccagggggcttcggtcagcagagccagggctactacagccagcac
ggccccccaccacacgctggccagcagcaggccccctacccccagcaggtccacccctcc
cagggccaagggcctccgcaagggggtccaccccaggcacagccaccctacaaccaggga
ccaacccagcccccgcagcagccggggccccagcagggccagtccgggcccagctaccct
cagcagcaaggacccccggggcagcagcctccacagcagcaacccccctcgcagcagcaa
ggacccccgcagcagcagcaagatagggcggcccctccacaggcccagccactcccaggc
catcaacaacccccagtccaccagccaccccccggccaccaatcctctccgggcccccag
ggccaacacccatctccaagtcacagtggacccccacagcagcagggtcagtctcagcag
ggccagccctcaccctactcccagaccccacccctgcagcagcagggtcagtctcagcag
ggccagccctcaccctactcccagaccccacccctgcagcagcagtcgcccttccatggg
tttccacctccgccacaggagctctcccaggactcgttcagctcccagtccagtgctccc
ccctccaaccagcccacgacttccaacaagagtggcacagaggacagcatgcagggacgg
ccttctagtttaccagacctctctggttccatagatgacctgccgacgggtacagagggg
gctctgagtccgggggtcagcacgtcgggggtgtccagtagccagggggaacagagtaac
cccgcccagtcacccttctcccctcacacctcgccccacttgcctggcatccgcgggccc
tccccctcccccgtgggctcccctgccagcgtcaccccctcgcgctccgggcccctctca
cctgctgctgtgccaggtaaccagatgcctccccggccgcccagcgtccattcagacggc
attctccacacatccatgggccagtcagccatgggccaggacagggtgtacatgcgtaac
ccccagatgcctccccacgggtcgccgcagcaacctggctccgccttatcccctcgccag
tcatcgggaggccagatgcttcctgggatggggccctaccctcagaacaactccatgggg
aactacggccctcagggtggacagtacggaccacaaggttaccccagacagcctggctac
agtggcatgcccaacgccaactaccctggtggtccggggggcatgccaggccaggctggt
ggggcgccgtatgcaggcatgccccctggcaggatgggcccgggtcagatggctgcccgc
ccctacggccccgggatgggccccaacatgggccccggcatgcctccacaggtgacctct
gggatgtgcccccctccaggcatgaacaggaagggccccgggggccctccagatgtagcc
tctaccatgcatcacggagccaactctatactcaacaggcctccaggttacccccccaat
atgccccaggggatgatgggagcagggcctccgtatggccctgggccgggggccatcaac
agcatgcaaggtatgatgaaccagggaggaccttacggaggagggccaatgggagggaac
atggccaacaacacacctggcatggctcctagccctgagtttggcatcgatgtcaaactg
aacccagcccagaagatgaacaacaagctggacggcacgtccaaaccagaaaccaagaag
gtaaagaagaagtcaaactcttcgacgacaaccaatgagaagataactcgtctgtatgag
ctgggtccggagccggagaggaggacgtgggtagaccggtacctggcgttcgctgaggag
aaggccacgggcatgaccaaccttcccgccgtgggacgcaaacctctggacctcttcaga
ctttacgtctcggtcaaagagatcggcggcctcacacaggtgaacaagaataagaagtgg
agggagttgtccaccaacctgaacgtgggcacgtccagcagcgccgccagctctctgaag
aagcagtacatccagtgtctgtacgccttcgagtgcaagatcgaacgtggcgaggacccg
cccccggatctcttcatcgacgccaaaaagaccacccagcccaagatccagccccccagc
ccagctgggtctggatctctgcagggcccccagaccccccagtccaccagtagttccatg
gcggaggggggagacctgaagccccccacgccagcctccacccctcacagccagatgccc
ccaatgcccgtcaggctgcaggacccgtttgcagatgggggtgacccagcatttgccaga
cggaactccatgacccccaacagctaccagcctgggatgggaggcccggagatgatgggt
cacatggggccctacgaatccaacaaggacccctttggtggcatgaggaaagctggagag
caattcatgactccagggccgggctctaacagtggtatggaggggcagttcaacagaggc
cccccaggccccaacatgcagatgggtccgagacaacagtacccctacggacctggatat
gacaggagacaggagccagggatgggtcctgatggcagtatgggtcctggggccccccag
cccaacctgatgccttcaggggccgactcggggatgtactcccctagccgacccccaccg
cagcaacgtcatgattcctatggtaatcagtatcctggtcaaggagtgccacctggtggc
ccctaccccaatcagcagccaggaatgtttccacagcaacaacccaactacaagcgtcct
ccagtggacggggcctacggtcccccagccaagcgtcacgagggggatgggatgtacaat
gtccccttcagtggtcagcagccagggccccagccctccgggggcccccaggtccaacaa
gacatgtacaatcagtacaacgcaggctaccccggctctgaccgccgaccacctggcccc
cagggccagttccctttccccttcggccgagaccgggggccctccagcggggtccccaac
tcccagtcctccttgcctccccaaatgatgggcagccctatgcaggcagcccctgacggc
ccccagggccccatgtggcagggacgcaatgagatgggttaccccaactacccgaatcgc
caggggcctccaggacctggccaggggcccccccaggggtaccacggcatgaaccgctct
gaggagatgatgccaggggctgaccagcggatgaaccatgagagccagtggcctggacac
cccagccagaggcagtccccctacgggccggggggctcggggccccccatgtccagaccc
ctgcagtccaactatcagagttcccagaaccatatttcccaggtgtccagccccgccccc
atgccccgccccatggaaagccggacgtccccctccaagtctccatacatgcactcaggc
atcaagatgcagaaggcggggccccctgtgcccgcgtcccacataggccaggcccccgtg
cagccacccctcatcaggcgggacatatccttccccccagggtcagtggaggcctcccaa
cccatcctcaaaccccgaggacgactcaccatgaaagacatcggcaccccagaggcctgg
agagtgatgatgtctctgaagtcaggcttactagcagagagcacgtgggccttggacacc
attaatattttactctacgatgacaacagcatttctactttcaacctctgccagctgcct
gggttcctggagctggttgtggagtatttcagacgctgcctcatccagatctttggcatc
ctgaaggagtatgaggtgggagaccctggccagcggacactcaccgacccgtatgctgcc
gacgaggactggtctgacgaagagctgcccgagcaggaggacatggaggaggaagaggac
gaagaggaggacgacgagaggaagagcaacgcagacaccaccacctcgtcgcagcaggtc
caggtgaaaaaggaggaggaagaggagaaatccacgcctgagaagtcgacagcggaggag
gaggagagggaaggaggggagtcttcttccacctcctcgcccccccagaacctcagcctc
ctacaagagaaacccaaacaggccagtaagtttgacaagctgcccatcaagatggtgcgt
aagaaagaccccttccctgggggccgttccagtaagctaggccggcggcagagctttgac
agcggactgatccactggagcatcggcgggggggacaccacggaacacatccagacacac
ttcgagagccggtccgacctcctcaagcagaggaagcaggtgctgccatcggccgccgag
agtagaaaggtcgccgtgcccccgacggtgtcagagaacccagaggagactactaagcct
ggcaaggaagagcagaccaccaagacctccaccccgaccacgcccgccccggtcaccgcc
accatcgacgacgtcctgtcggcccggccgggctcggtgacggaggaggcggtgcgagga
gcagccgaggagcagaaggagaacaggggacggttcctgtactccctccgccaggcgcag
cagagccgacgcaacatcaccatcctggaggacgagcctcacagcaaggacgagaccgcg
ctgagcacactgtcggactggcaggacgccctggctcaccgctgtgtctgcgtctccaac
atcgtccgctcgctgtccttcatccccggcaacgacctggagatgtccaaacacccaggg
ctgctactactgctgggcagtctggtcctgctccaccaccgtcacccagagaggaaacag
gcccccgtcacctacgagaaggagaaggaggaggacgaggacgagaggatgagctgtgag
agggacgagtggtggtgggactgtctggaggtcctcagggagaactgcctggtcactctg
gctaacatctccggccagttggacttgtccatctacccagagagcatctgtctgcccctg
ctggacggcctgcttcattgggctgtttgtccttcggccgaggccctggacccctttccc
atgctggggccccacggggccctatccccccagagactggtgctggagaccctcagcaag
ctgagcatccaggacaacaacgtggaccttatcctggccacgcctccattcagccggctg
gagaagctgtacgggacgctggtgcgtctggtcggggagaggaaggtggctgtctgcagg
gagatgtctgtggtcttactggccaacctggcccagggggacagcatggcggccagggcc
atcgccgtgcagaaagccagcgtaggtaacctcctgggcttcctggaggacagtctagca
gccacgcagtaccagcagagccagagttccctgatgcacctacagggggcgcactttgag
cccactagcgtagacatgatgcggcgagcggcccgcgccctgcacgccatggctaaggtg
gaggagaaccactcagagttcaccctgtacgagtcccgcttactggacatctctgtctca
ccactcatgaactctctggtgtcccatgtgatctgtgacgtactctttctgattggccag
tcatga
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integrated database retrieval system
