Oncorhynchus mykiss (rainbow trout): 110496501
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Entry
110496501 CDS
T07259
Name
(RefSeq) programmed cell death 6-interacting protein isoform X1
KO
K12200
programmed cell death 6-interacting protein
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03250
Viral life cycle - HIV-1
omy03272
Virion - Hepatitis viruses
omy04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
110496501
03272 Virion - Hepatitis viruses
110496501
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
110496501
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110496501
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
omy04147
]
110496501
Membrane trafficking [BR:
omy04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
110496501
Exosome [BR:
omy04147
]
Exosomal proteins
Proteins found in most exosomes
110496501
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRO1
ALIX_LYPXL_bnd
AAT
DUF2226
COG3_N
Snapin_Pallidin
Motif
Other DBs
NCBI-GeneID:
110496501
NCBI-ProteinID:
XP_021428112
Ensembl:
ENSOMYG00000042822
LinkDB
All DBs
Position
18:complement(52677421..52704871)
Genome browser
AA seq
887 aa
AA seq
DB search
MATFISVPLKKSSEVELVKPLSKFVTATYPTGEDQAEYIRSVEELNKLRKSALGRPLDKH
ESSLEILLRYYDQLCAVEPKFPFSENQLCLTFTWKDAFDKGSLFGGSVKLALASLGYEKT
CVLFNGAALASQIASEQNLDSDEGLKAAAKYYQLASGAFGHIKDTVLSALNREPTMDISP
ETVGTLSLIMLAQAQEVFFLKATSDKMKDAIIAKLANQAADFYSDAFKQCQYKENLPKCI
YFQEVLPVLAAKHCIMQANAELHQSILAKQKKHFGEEIARLQHASELVKTVASRYDEYVS
VKDLSDKISRALTAAKKDNDFIYHDRVPEVKDLEHIGKAALVKATTITPPLSAKFTDLFE
KMVPMAVQQSMSVYSQRKAETVNRLVGTMREATNLCNGVLASLNLPAALEDLSGDSIPQS
IIEKAHAIVQQGGLQSIEQLIRDLPELLTRNREILDESLKMLDDEESTDSELRSKFSQRW
NRTPSGDLYKPLRAEGGNFRSVLDKAVQADQVVRERYNAHCEMIALLCKPEAELTAAIPS
ANPAKTLQGSEVVSVLRSQLSQLEVVKREREVLETEIKGVTFDMSSSFLTALAQDGAINE
EALSMSQLDQSYGSYSQRVQASLRSQEELLGNVQASHQEFSSLKQSNSEANDREEVLKKL
ASAHDSYVEITSNLREGTKFYNDLTEILLKFQNKCSDIVFARKTERDELLKDLQQSIARE
PSAPSFSVPAYQTNPTPTATGPTPAPRTVFQPQQPQAKAQPPERPPPPAFTPQAASAPGN
PPSNQPQPVNPPPMAPPSQAQGPPYPTYQGYPGYAYQMPMGYNPYAAYGQYNMPPTMQPN
MQPYIPYQQAPAPGQGGYPGVPPTQQHPYTYQQQPQQPPPQPYYPQQ
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atggcgacttttatttctgtcccgttaaagaagtcgtctgaagtcgaactagttaaaccg
ctctcgaaattcgttacggcgacatacccaacgggcgaggatcaagctgagtatatccga
tccgtggaggagttgaacaagctgcgcaagagtgctctggggaggccgctcgacaaacac
gaaagctcgctggaaatcctcctgaggtattatgatcagctgtgtgccgtggagccaaag
tttcccttctctgaaaaccagctgtgtctaaccttcacatggaaagatgcctttgataag
ggctcactgttcgggggctcagtcaaactagccctggccagtctgggctatgagaagaca
tgtgtgttgttcaatggagcagcgttggcaagtcagatcgcttcagaacaaaacctggac
agcgatgaaggactgaaggccgcagccaaatactaccagttggcaagtggagcatttggt
cacattaaggacacagtgctgtcggctctgaacagagagcctacaatggacatttctcct
gagaccgtaggaaccctcagtctcatcatgctggctcaggcacaggaagtcttctttctc
aaggctacttcagataagatgaaggacgccatcatcgctaaactggccaatcaggcggca
gatttctacagcgatgccttcaagcagtgtcagtacaaagagaacctgcccaagtgtatt
tatttccaggaggtgttgccggtgctggcagctaaacactgcatcatgcaggccaacgct
gagctacaccagtctatcctcgccaagcagaagaaacactttggggaggagatcgctcgc
ctgcagcatgcttcagagctggtgaagacggtagcgtctcgctatgatgagtacgtcagt
gtgaaagaccttagtgataagatcagccgcgctctgaccgcagctaagaaggacaacgac
ttcatctaccacgaccgcgtccctgaggtcaaagacctggaacacatcggcaaggcagcg
ctggtcaaggctaccaccatcacacctccgctcagcgccaagttcactgacttgtttgag
aagatggtgcccatggctgtgcagcagagtatgagtgtgtacagccagaggaaggctgag
accgtcaacagactggtaggaaccatgagggaagctactaacctctgcaacggtgtcctg
gcatctctgaacctgcctgcggctctggaggacctgtctggagattctatcccacaatcc
attattgaaaaggcccatgccatcgtccagcagggggggctgcagagcatagagcagctg
atcagagacctgccggaactactgacacgcaacagagagatcctggatgagtctctgaag
atgctggatgatgaggagtcgacagacagcgagctgagatccaagttcagccaacgctgg
aacagaactccctctggagacctctacaaaccactcagagcggaggggggtaacttccgt
agcgtgttggacaaggcagtgcaggctgaccaggtggtcagggagcgttataatgcacac
tgtgagatgatcgctctcctctgtaaacctgaggctgaactcaccgctgccataccttca
gccaaccctgctaagacattgcagggcagcgaggttgtgagtgtgttgcgttcccagctg
tcccagctagaggtggtgaagagagagagggaggtgctggagacggagattaagggcgtg
acctttgacatgtcctccagcttcctgacggctctggctcaggacggggccatcaatgag
gaggcactgtcaatgagccagctggaccaatcatacggcagctacagccagagggttcaa
gccagcctccgctctcaggaagagctgttgggcaacgtgcaggcatctcaccaggagttc
tccagtctgaagcagtccaactctgaggctaatgatcgtgaggaggtgttgaagaagctg
gcctcggcccacgacagctacgttgagatcaccagcaacctcagagagggcaccaagttc
tacaatgacctcaccgagatcctgctgaagttccagaacaagtgcagtgacatcgtcttc
gcccgcaagacagaacgggatgaactgctgaaggatttgcagcagagcatcgccagggag
cccagtgccccatccttctctgtccccgcctaccagactaaccccacccccaccgccact
ggaccaacccccgcaccaaggactgtcttccagcctcagcagccccaggcgaaggcccag
cctcccgagcggccccctccccctgccttcaccccccaggccgcctccgcaccaggcaac
cctcccagtaaccagcctcaaccagtaaaccccccacctatggcccctccctcacaggcc
cagggaccgccttaccccacataccagggataccccgggtatgcctaccagatgcctatg
ggttataacccgtatgcagcgtacggccagtacaacatgcccccaactatgcagcctaac
atgcagccctacatcccctatcagcaggccccagcacccggacaggggggctaccctggg
gtcccccccacacagcagcacccctacacctaccaacagcagccccagcaaccaccacca
cagccatactacccacaacaataa
DBGET
integrated database retrieval system
