Oncorhynchus mykiss (rainbow trout): 110496502
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Entry
110496502 CDS
T07259
Symbol
clasp2
Name
(RefSeq) CLIP-associating protein 2 isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omy03036
]
110496502 (clasp2)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
omy04812
]
110496502 (clasp2)
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
110496502 (clasp2)
Cytoskeleton proteins [BR:
omy04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
110496502 (clasp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
HEAT_EF3_N
CEP104-like_TOG
HEAT
TOR1L1_N
Cnd1
ParcG
HEAT_DAAF5
IFRD
MMS19_C
TAN
Motif
Other DBs
NCBI-GeneID:
110496502
NCBI-ProteinID:
XP_036809061
LinkDB
All DBs
Position
18:complement(52731509..52824972)
Genome browser
AA seq
1574 aa
AA seq
DB search
MEEHDNMDYFYQQVLQKDVTRRLQVGQDLIDYLNDPQRSTDVEQDKPRLDKTVDELTGWV
NSSNYKVALLGIDIAGAFVDRLGERFRGYLGTVVPALVDRLGDSKDQVREQSQTVILRCM
EVTASPMYVWERLLPGFKHKNFRSREGVCLVLCATLNTYGAQPLSLSKIVPYLCTLTGDQ
NPQVREAATASLVDVYRHIGERVRADLGKRGLPATRLQTIYGRFDEALNSGNMALSPSHV
SQISIVLRPSPKRRQPRRIILRHNHSFEDDVDSTDGSRAQAAFKVPKIPKKPAESSTARR
PSATGPKIGGASKDGAGGIDEEDFIKAFTDVPTVQIYSSRDLEDNLNKIREICSDDKHDW
DQRAAAMKKIRSLIVAGATEYECFFQHLRLLDGAFKLSAKDLRSQVVREACITVAHLSTV
LGNKFDHGAEGILPVLFNLIPNCAKVMATSGVSAIRFIIRHTHVPRLIPLITSNCTCKSV
AVRRKCFDFLDLLLQEWQTQTLERHTAVMVASIKKGIADADAEARVEARKAYWGLRNHFP
GEADSLFNSLEPSYQRSLQSSLRNAGSVASLPQSDRSSSSSQESLNRPLSSKWSAAPGRV
PAGHKGGASPGSLQRSRSDVDVNAATVAKQRHIGQVGAGRLTPGSYSSLDDASDKMDGAR
SVNGRLRTKQPLTTVTSVSQVDSRGRTRTKMVSQSQRSDESDCTPGSQSATPIGAGSRSG
SPGRVLTSTALSTLGSGAQRVLAGAGGRRSRIPRSQGCSRDSSPTRLSVAPSSISSIYNG
ASRGARGSRIPRPSMSQGCSREASRESSRDTSPVRSFTPLASRHYSRSTGALHTADALGA
AGSGYSISQSSRLSSSVSAMRILNTGSDVEEALADALLLGDMRSKKKPARRRYENYGMYS
DDDANSDASSACSERSYSSRNGGAIPTYMRQTEDVAEVLNRCASANWSERKEGLLGLQAL
LKNQRTLSRVELKRLCEIFTRMFADPHSKRESGSRVYGTAESGISSASFKRVFSMFLETL
VDFVLVHREDLQDWLFVLLTQLLKKMGADLLGSVQAKVQRALDITRESFPNDLQFTILMR
FTVDQTQTPNLKVKVAVLKYIETLTLQMEPQDFVNSSETRLAVSRIITWTTEPKSSDVRK
AAQSVLISLFQLNTPEFTMLLAALPKTFQDGATKLLQNHLRNTGNAAQAPTGSPLTRHTP
RSPASWSSPLTSPTNTSQNTSSPSAFDYDTENMNSEDIYSSLRGVTEAIQNFSVRSQEDM
NEPVRRREGEEGGSAGADQVDGGRTALDNKTSLLNTPLLSSSPRGSRDPFTDSPFKHSVI
DTSLDESDQQTDDSSIDQSELVSELLKELSNHNERVEERKAALCELLKLIRENTLQVSWD
EHFKTILLLLLETLGDREHVIRALALRVLREILSRQPWRFKNYAELTIMKALEAHKDPHK
EVVRAAEETAAMLASSISPDQCIKVLCPIIQSADYPINLAAIKMQTKVIERVPHEGLVSM
LPEIVPGLIQGYDNSESSVRKACVFCLVALYAVIGEELKPHLNQLSGSKLKLLNLYIKRA
QSGSSGGEPPADSL
NT seq
4725 nt
NT seq
+upstream
nt +downstream
nt
atggaggaacatgacaacatggattatttttaccagcaggtcctgcagaaagacgttacc
cgcaggctgcaggtcgggcaggacctcatagactacctgaacgacccgcagaggtccacc
gatgtggagcaagacaaaccacggctggataaaactgtagatgagctgacgggatgggtc
aactccagcaactacaaggtggcgttgttggggatagacattgccggggcgtttgtcgat
cgcttgggggagcgcttcagaggatacctggggacagtggtccctgcgttagtggaccgg
ttgggggacagtaaggaccaggtcagagaacagagtcagacggtcatcctccgctgtatg
gaagtcacagcatcgcctatgtatgtgtgggagaggttgcttcctggttttaaacataag
aatttccgcagcagagagggcgtgtgtctggttctctgcgccaccctcaacacgtatggt
gctcagcctttgagtctcagtaagatcgttccgtacctctgcactctgacaggagatcag
aacccacaggtgcgtgaggctgccacagcatcactggtggatgtgtatcgccacatagga
gagagagtcagagccgaccttggaaagagaggcctgcctgccacacggttacagacaata
tacggacgttttgatgaagcgttgaattctgggaacatggcgctcagccccagtcacgtc
tcacagatttctatcgtattgcgtccatctccgaaaagaagacaaccaaggagaatcatc
cttcgtcataaccatagttttgaggatgacgtggacagtacagatgggagccgtgctcag
gctgccttcaaagtccccaaaatccccaagaagccggccgagtcctctaccgcacgcaga
cccagcgctacaggacccaagatcggaggtgcgtccaaggatggagctgggggcatcgat
gaggaagacttcatcaaagccttcactgacgtccccacagtacagatctactcgtctcgt
gacctggaggataacctgaataagatcagagagatctgttctgatgacaaacatgactgg
gaccagagagctgctgcaatgaagaagatccgctcgctgattgttgccggggcaacggag
tacgagtgtttcttccaacacctgaggctgttggacggagcgttcaaattgtcagctaaa
gacctccgatcacaggtggtacgagaggcctgcatcactgtggcccacctgtcgacagtg
ttgggtaataagtttgaccatggtgctgagggcattcttcctgtcctgttcaacctcatc
cctaactgtgccaaggttatggccacttcaggggtgtctgctatacgcttcatcatacgg
cacacacatgttcccagactcattcccctgatcaccagtaactgcacctgcaagtctgtg
gccgtcagaaggaaatgttttgacttcttggacctgctgctgcaggagtggcagacccag
actctggagagacatacagcagtgatggtagcgagcattaagaaggggattgcagatgcc
gacgcagaggccagagtagaggcccgcaaggcgtactggggtctgaggaaccattttccg
ggagaggcggactctctgttcaactcgttagaaccgtcctatcagaggagcctccagtcg
tctctcaggaatgccgggagcgtggcgtctcttcctcagagtgaccgctcctcttcctct
tcacaggagagcctcaatcgtcctctgtcgtctaaatggtcagctgctcctggtagagtc
ccggctggtcataagggcggggcgtcgccaggctccctgcagcgttcccgtagcgatgtg
gatgttaatgcagcaacggttgctaagcagcggcacatcgggcaggtgggggcggggaga
ctgacccccggttcctactcgtcattggatgatgcctctgataaaatggatggggccagg
tcagtcaatggtcgtctgaggaccaagcagcctctcaccacggtgaccagcgtcagccag
gtggactcccggggacgcacccgcaccaagatggtgtcccagtcacaacgttccgacgaa
tcagattgcacgccaggatctcagtctgctacccccattggtgccggcagtcggagtggt
tctccgggtcgcgtcctgaccagtaccgctctgagtactctgggttctggagcccagagg
gtcctagctggggctggagggagacgtagccgcatcccccgcagccagggctgctcacga
gactcctcccctacacgcctgtctgtcgctccctccagtattagttccatctacaacggc
gcaagcagaggagctcggggcagtcgtatcccccggcccagtatgagtcagggctgcagc
agggaggccagcagagagagcagcagagacaccagccctgtacgctcctttacacccctg
gcgtcgcggcactactctcgctccactggagctctccataccgccgatgctttaggggcc
gcagggtcagggtacagtatcagtcagtccagtcgtctgtcctcatccgtcagcgccatg
agaatcctcaacacaggatctgatgtagaagaggccctcgctgatgccctgctgttggga
gacatgagatccaagaagaagccagcgcggcggcgctatgagaactatgggatgtattcg
gatgatgatgctaacagtgatgcgtccagcgcctgctcagagcgctcctacagctccagg
aatggaggagccatcccaacgtacatgagacagactgaggacgtggccgaggtgttgaac
cgctgtgccagtgccaactggtcggagaggaaggagggactgctgggtctacaggctcta
ctgaagaaccaacgcaccctcagtcgtgtggagttgaagaggttgtgcgagatcttcacc
agaatgtttgcagacccccatagtaagcgagaatccggatctagggtctatggaacggca
gaatccggtataagctcagcctccttcaagagagtgttcagtatgttcttagagacccta
gtggactttgtcctggtgcacagagaagacctgcaggactggctgttcgtcctgctcacc
cagctgctgaagaagatgggagctgacctgctgggatcagtacaggccaaggtccagaga
gcactggacatcacacgagagtctttccccaacgacctccagttcactatcctcatgagg
ttcactgtggaccagactcagacaccaaacctcaaggtgaaggtggctgttctgaagtac
attgagaccttgaccctgcagatggagccgcaggactttgtgaactccagtgagacgcgc
ctggctgtgtctcgcatcatcacctggaccacagagccaaagagctccgacgtcaggaag
gctgcccagtcggtgttgatctcgttgtttcagttgaacactccagagttcaccatgctg
ctggcagctctgcccaagaccttccaggatggcgccaccaaactgctacagaaccacctg
aggaacacaggcaatgctgcacaggccccgacaggaagccctcttacacgccacaccccc
cgctctcctgccagctggtccagccccctcacctctcctaccaatacatcacagaacaca
tcctcacccagtgcatttgactacgacacagagaacatgaactcagaggacatctacagt
agtctgagaggagttacagaggccatccagaacttctccgtccgtagccaggaagacatg
aacgaaccggtcagacggagggaaggagaggagggtggtagtgctggtgctgaccaggtg
gatggaggtcgtacagctctggacaacaagacgtctctcctcaacacccccctgctctcc
tcttctccccgggggtcccgtgaccccttcactgactcccccttcaaacacagcgtcata
gatacttcactagacgaatcagaccagcaaactgacgacagcagcattgaccaatcagag
ctggtgtctgagctgctgaaggagctgtccaatcacaatgagcgtgtggaggagaggaag
gcagcgctttgtgagctcttgaagctgattcgagaaaacaccctgcaggtctcctgggat
gaacacttcaaaaccatcctcctgttactactggagacgctgggggacagagagcatgtg
atcagggcgttagctctgcgtgttctgagggagattctgagccgccagccctggaggttt
aagaactatgctgaactcaccatcatgaaggccctggaggcgcacaaggacccacacaaa
gaggtggtgcgagcggcagaggagactgcagccatgctggcgtcgtccatcagtccagac
cagtgtatcaaggtgttgtgtcccatcatccagtcagctgactaccccatcaacctggct
gccatcaagatgcagactaaagttatagagagggtcccccatgaaggactagtgagcatg
ctgcctgagatagtccccggactcatacagggttatgacaactctgagagcagtgtgagg
aaggcctgtgtattctgtctggtggctctctacgcagtcataggggaggagctaaaacct
cacctcaaccaactgtctggcagcaaattgaagttgttgaatctgtacatcaagcgtgcc
cagtccggctccagtggtggtgagcccccagcagacagcctatag
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integrated database retrieval system
