Oncorhynchus mykiss (rainbow trout): 110496511
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Entry
110496511 CDS
T07259
Name
(RefSeq) ankyrin repeat and IBR domain-containing protein 1
KO
K11967
ankyrin repeat and IBR domain-containing protein 1 [EC:
2.3.2.31
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110496511
Enzymes [BR:
omy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
110496511
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
110496511
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
Ariadne
IBR_1
IBR_2
Ank_2
Ank
Ank_5
Ank_4
UBA_ARI1
zf-RING_2
zf-RING_UBOX
Rcat_RNF216
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
110496511
NCBI-ProteinID:
XP_036809133
LinkDB
All DBs
Position
18:53141523..53173990
Genome browser
AA seq
1418 aa
AA seq
DB search
MGNTATKFRKALVSGDEALAWQLYEGNSQFREGLDPNASYGETYQHNTPLHYTCRHAMTR
LLRSFLFSKEGNPNKRNVQNETCLHALCQGAHILLLPEGALSPRLARPQRDEQRRADCLQ
MILSWTGARLDRGQYERVNINATDNRNSTCLHYAAAAGMKNCVELLVQAGSDLFVEDEEK
LTPCDHAERQQHTHLALRLEAMMVFSQHTHTETQTPSSTLRHKEPYEGLKLQDLRRLKDM
LIVETADMLQAPLFTAEALLRAHDWDREKLLEAWMSDSEECCQRSGVLMPTPPPSGCNAW
DTLPSPRTPRSPLTLTLTSLTDSCLTPGEEGGTTCGICLCSISVFEDPIDMSCGHEFCRA
CWEGFLNVKIQEGEAHNIFCPACDCYQLVPVQVIESVVSREMDKRYLQFDIKAFVENNPS
IRWCPAVRCERAVRLTRPGPGVNHLGFPLLPSPAVDCGKGHLFCWECLGEAHEPCDCQTW
RMWLQKVSEMKPEELAGVSESYEDAANCLWLLTNSKPCANCKSPIQKNEGCNHMQCAKCK
YDFCWICLEEWKKHSSSTGGYYRCTRYEVITQLEEQSKEMTGEAEKKHKSFQELDRFMHY
YSRYKNHEHSYKLEQRLLKTAKEKMEQLSRAFIGCEGSPPDTRFIEDGVCELLKTRRVLK
CSYPYGFFLQPHSTQKEIFELMQTDLEMAVEDLAQKVNRPYLRTPCHKIVSAACLVQQKR
EEFLASVARGVAPNDSPEVPRRSFPAGSWDWEYLGFTSPEEYADFQYRRRHRPRRRGDMP
SLHSLRSNSSTPEPNQNPENTEVLQERVEGRRQPLRSLDEDDPNILLAIQLSLQDSRRER
EMERGMGGGLERGSGVIEGPGLGSGQGLDIGPVMGPGVGSLSETQDPSSVGGSLGASGSS
NLPRPDPNQSLNAELLELGESLMRLGQITTPYTLDNTNIPTPYSLDHTYDHYNPSPRYSQ
SQDLSYTSYTTDHSYAVLEPDLSTPYTHGYGHTCDHNQDHTTINIPFTPEHDHNCGQNQN
RGHPTINAFYSSVHCQPSLYTKTSPSHTDLTASSSPKHTSLYPSDPEPYAMFSLPHNPEP
DQTISCTQDTHPDQNHHHCCHSSHYTPNPDHYTPNTDPYTPNPDPYTPNPDHYTPNPDSY
TPNPDHYTPNPDPYTPNPDHYNPNPDHYNPNPDPYNPNLDPYTPNPDYTSNPDPCRTSSD
PHGLLLPSPDPELVSPVVPPGGPFTPSDPGCLERLDPSAEALLLDNIMAWIQHTHPQDSP
QNIDLIPSASSETGSPPEKYSPPDTETDSPTVSLQDGGDPKSDSPPDAQASFSGEALAEL
RQGEAGRGQAGSPGPGDSLEVKRPSTLDLECCEGEEYVECVVTGFVSDLSQDALDTHIHS
HTHCGDDNLTPTKTDSSPTAWVVEDQSRPEWEEQVHLV
NT seq
4257 nt
NT seq
+upstream
nt +downstream
nt
atggggaacacagccactaagttccggaaggctctagtcagcggggacgaggcgttggca
tggcaactgtacgagggcaacagccagttcagagaggggctggaccccaacgcgtcctac
ggagagacctaccaacacaacacacccctccactacacctgcaggcacgccatgacacgt
ctgctcaggtccttccttttcagtaaagaagggaaccctaacaagcggaacgtgcagaat
gagacatgtctgcatgcgttgtgtcagggagcgcacatcctgcttctgccagagggggca
ctgtctcccagactggccagaccacagagagacgaacaacgcagggcagactgcctacag
atgatcctgagctggaccggggctaggctggacagaggacagtatgaaagggttaacatt
aatgctacagacaacaggaacagcacctgtctacactacgctgctgctgctggcatgaag
aactgtgtagagctcctggtccaggctgggtcagacctgtttgtggaggacgaggagaag
ttaaccccgtgtgaccacgcagagagacagcagcacacacacctggccctgcgcctcgaa
gccatgatggtgttctcacaacacacacacaccgagacacagacacccagcagcacgctg
cgccataaagagccctatgagggtttgaagctgcaggacttgaggagactgaaggacatg
ttgatagtggagacagctgacatgctgcaggctcctctcttcaccgctgaggcactgctc
agagcacacgactgggacagagagaagcttttggaagcctggatgagtgattctgaggag
tgctgccagcggtctggggtcttgatgcccacacccccgcccagcgggtgcaatgcctgg
gacaccctgccttccccgcgcacccctcgctcccccctcaccctaaccctcacgtccctc
actgacagctgcctcaccccaggggaggagggagggactacgtgtgggatctgcctgtgt
tccatctcagtgtttgaagacccaatagacatgtcctgtggtcatgagttctgccgagcc
tgctgggaagggtttctgaatgtgaagatccaggagggtgaggctcataacatcttctgt
cctgcctgtgactgttaccagctggtgcctgttcaggttatagagagtgttgtctccaga
gagatggacaaacgatacctgcagttcgacatcaaggcgttcgtggagaacaacccatct
attcggtggtgcccagcagtgcggtgtgagagagcggtcagactgaccaggcctggtccg
ggggtcaaccacctggggttccccctgctgccctcccctgcagtcgactgtggcaagggt
cacctcttctgctgggagtgtctaggtgaggcccatgagccatgtgactgtcagacatgg
aggatgtggctgcagaaagtctcagagatgaagccagaagagttggcaggtgtatcggag
tcgtatgaggatgcagctaactgtctgtggttgttaaccaactctaaaccctgtgccaac
tgcaagtctcccatacagaagaatgagggctgcaaccacatgcagtgtgccaagtgtaaa
tatgatttctgctggatctgtctggaagagtggaagaaacacagctcttcaactggagga
tactaccgctgtacacgctatgaggtcatcacacagctagaggagcagtccaaagagatg
actggagaggcggaaaagaagcacaagagttttcaggagttggaccgcttcatgcactac
tacagccgctataagaaccatgaacacagctataagttagaacagagactattgaaaaca
gccaaagagaagatggaacagctgagtagagccttcattggatgtgagggctccccccca
gacaccagatttatagaggacggtgtgtgtgagttgttgaagacacgtcgtgtgttgaag
tgttcctacccctacggattcttcctccagcctcacagcacacagaaggagatatttgaa
ctcatgcagactgatctggagatggcggtggaggacttggctcagaaggtgaaccgtccc
tacctgcgtacgccgtgtcataagatagtcagcgctgcctgtctggtacagcagaagaga
gaggagttcctggcctcggtggctagaggggtggcccctaacgactcacctgaagtacct
aggaggagtttccctgctggatcatgggactgggagtacctgggattcacctctcctgag
gagtatgctgatttccagtaccggcggagacaccggccgcgtcgtagaggagacatgccg
agtttacacagtctgaggagcaacagcagtactcctgagcccaaccagaaccctgagaat
acagaggtcctccaggagagagttgaggggcggagacagcctctgaggtcactggatgaa
gatgaccccaacattctactggccatccaactgtcactacaggactcacggagggagaga
gaaatggagagagggatgggaggaggactggaaagaggctctggtgtgattgagggccca
gggcttgggtctggacagggtctggatatagggccagtaatgggtccaggggtggggagc
ctcagtgagactcaggacccctccagtgtgggtggttctctgggggccagtggctcctct
aacctccctagaccagaccctaaccagtcgctaaatgctgagctgttagagctaggagaa
agtctgatgagactgggacaaataactactccatataccctagacaacactaatatccct
acgccatatagcttagatcacacctacgaccactacaacccttcccccaggtacagtcag
agtcaggaccttagctacacatcttatacaactgaccacagctatgctgttctggaacct
gacctcagcacaccttatacacacggctacggtcacacctgtgatcataaccaggaccat
accactatcaacattcccttcactccagaacacgaccataattgtggtcaaaaccaaaac
cgtggccatcccactatcaatgccttctacagttctgttcactgccaacccagcctctac
actaaaacatctccttctcacacagaccttacagcatcttctagccctaaacacacaagc
ctttacccctcagacccagagccatatgctatgttcagccttccccataaccctgaacca
gaccaaaccatatcttgcacccaggacacacatcctgaccagaaccaccaccattgctgc
cactccagccactacacccctaacccagaccattacacccctaacacagacccttacacc
cctaacccagacccttacacccctaacccagaccattacacccctaatccagactcttac
acccctaacccagaccattacacccctaacccagacccttacacccctaacccagaccat
tacaaccctaacccagaccattacaaccctaacccagacccttacaaccctaacctggac
ccttacacccctaacccagactacacctcgaatcctgacccatgccgcacttcctcagac
ccccacggcctcctgctcccctccccagacccagaactcgtctccccagtggtccctcca
ggtggtcccttcacccccagtgacccaggctgcctggagcgcctggacccctcagctgaa
gccctgctcctggacaacatcatggcctggatccaacacacacacccccaggacagcccc
cagaacatcgacctcatcccctcagctagctccgagactggctcacccccggagaaatac
tcacctccggacacagagacagactcacccactgtttcactccaagatggtggggaccca
aagagtgattcccctcctgacgcccaggccagtttcagtggggaggccctagccgagcta
cggcagggagaggcgggtaggggacaggctggctcccccggccctggagacagcctggag
gttaaaagacccagcactctggatctggagtgttgtgagggtgaggagtatgtggagtgt
gtagtcacagggtttgtgtcggacctgtcacaggacgcattggacacacacatacactca
cacacacactgtggagatgacaacctcactcctaccaagacagactcaagccccaccgcc
tgggtagtggaggaccaatcacgcccggagtgggaagagcaagttcacctggtgtga
DBGET
integrated database retrieval system
