Oncorhynchus mykiss (rainbow trout): 110496512
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Entry
110496512 CDS
T07259
Symbol
snrpd1
Name
(RefSeq) small nuclear ribonucleoprotein Sm D1
KO
K11087
small nuclear ribonucleoprotein D1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110496512 (snrpd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omy03041
]
110496512 (snrpd1)
03032 DNA replication proteins [BR:
omy03032
]
110496512 (snrpd1)
Spliceosome [BR:
omy03041
]
Complex A
U1 snRNP components
Sm proteins
110496512 (snrpd1)
U2 snRNP components
110496512 (snrpd1)
Complex B
U1 snRNP components
110496512 (snrpd1)
U4/U6.U5 tri-snRNP components
110496512 (snrpd1)
Complex C
U2 snRNP components
110496512 (snrpd1)
DNA replication proteins [BR:
omy03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
110496512 (snrpd1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
EBNA2_Core
Gemin7
YomU_Tube
Hfq
SM-ATX
API5
AAA_RNF213_3
Motif
Other DBs
NCBI-GeneID:
110496512
NCBI-ProteinID:
XP_021428132
Ensembl:
ENSOMYG00000043154
UniProt:
A0A060XZM9
LinkDB
All DBs
Position
18:53175661..53178938
Genome browser
AA seq
119 aa
AA seq
DB search
MKLVRFLMKLSHETVTIELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREPTQLESLSI
RGNNIRYFILPDSLPLDTLLVDIEPKVKSKKREAVAGRGRGRGRGRGRGRGRGRGGPRR
NT seq
360 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcgtacgctttttgatgaaactcagccacgagactgtgaccattgagctgaag
aatggcacccaggtccatggaacaatcacaggtgtggatgtgagtatgaacactcatcta
aaggcggtaaagatgactctgaagaaccgtgagcccacccagctggagagcctcagtatc
cgtgggaacaacatcagatacttcatcctgccagacagcctgccgctggacactctgctg
gttgacatagaacccaaggtcaagagcaagaagagagaggctgtggctgggcgtggaagg
ggcagaggaagagggcgtggcagggggagaggccgaggcaggggagggcccaggagatga
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