Oncorhynchus mykiss (rainbow trout): 110496520
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Entry
110496520 CDS
T07259
Symbol
snx13
Name
(RefSeq) sorting nexin-13 isoform X1
KO
K17925
sorting nexin-13
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
omy04990
]
110496520 (snx13)
Domain-containing proteins not elsewhere classified [BR:
omy04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
110496520 (snx13)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
RGS
PX
Rep3_C
DUF6395
Motif
Other DBs
NCBI-GeneID:
110496520
NCBI-ProteinID:
XP_021428142
Ensembl:
ENSOMYG00000044420
LinkDB
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Position
18:complement(53357729..53385541)
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AA seq
996 aa
AA seq
DB search
MSNDVANRRISSAQLIQASLSVWGWGGLGVVLFLITFGPFAIFYLAFYICCVVGGGFAVT
LLFGKTNSERHLEKCEHSYLPATQTGILKTLDEMRLEQKPIKIDRRLTGSNYIDEPLQQV
IQFALRDYIQYWYYTLSEDESFLLEIRQTVQNALVQFSTRSKEVDWQPYFTTRLVDDFAT
HLRVFRKAQDRLERRDDNKQRDLSEEMVESFFEAEVEMERSVCRDVVCTSLKDEEGFLRD
LCEVLLYLLLPPGDFHNKNMRYFLREILARGVLLPLVNQLSDPDYINQFVIWMIRDSSCN
YEAFMNILKLTDKVSELEAVKDKALEELQYLRSLDTAGDDINVIKNQINSLLFVKKVCET
RIQRLQSGKEVDTLKLAANFDKLCIIPLEHILVHNIALQFFMDYMQAAGAQAELFFWLTV
EGYRVTAQQQLEVMEGWQKDGKKGGSTQGLLKAAALGVYEQYLSDKASPRVQVDEVSVVK
LREKLQKEGDPTPEIFDEIQRKVYDMMLRDERYYPSFRQSPLYIRMLAELDMLKEPSYRG
SDDGDGESFNGSPTGSINLSLDDLSNSCHDDNIQLHAFISDTVADACLPGAGLGMGLGLL
GATGVCNDHGKTYALYAITVCRRNHDGSEDSWKTYRRYSDFHDFHMRITEQVKFENLMSI
LKLPGKKTFNNMDRDFLEKRKKDLNAYLQLLLNPEMMKAYPTLVHYVYDFLENKQYSKGK
GDFARKMDTFVNPLRSSMRNVSNAVKRLPDSLAEGMNTAADNMGRMSEKLGQDIKQSMFK
VPPLLPKSNVDPEHCRVSAQLDDNVCVFQVDDNIPLRVMLLLMDEVFDLKERNQWLRRNI
KNLLQQLIRATYGDTINRKIVDHVDFMTAPEQVADYVKKFRDSYWPNGILAESPPRRDKN
IRMRTRVAAKTNLLGIMPDELKHIIGADTTRKGILRVFDMFQHGPMNRRLVYVLLEGFLE
TMFPQYKFPELFVKLHSRSPRTARYTQKLKSTSLKR
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacgacgttgctaacaggagaatctcttcagctcaactgattcaggccagtctg
tctgtgtggggatgggggggtctaggagtggtgctgttcctcatcacttttggacccttc
gctatcttctacctggccttctatatctgctgcgttgtaggcggtggttttgcggtcact
ctgttgtttgggaagaccaactcagagagacatcttgagaagtgtgagcactcctacctg
ccagccacgcaaacgggtatactgaagacgttggatgagatgaggttggagcagaagcct
ataaagatagacaggagactgactggctccaactacatagacgagcctctgcaacaggtc
atccagtttgcattgagagattatattcagtattggtattacactctgagtgaggatgag
tctttcctgctggaaatcagacagactgtccagaacgctttggtccagttctctacacgg
tctaaagaggtggactggcagccttatttcaccaccagactggtggatgacttcgctact
cacctccgagtcttcagaaaggcccaggacagactggagcgcagggatgacaataaacag
agggacttgtcggaggagatggtggagtcattctttgaggcggaggtagagatggagagg
agcgtctgcagagacgtggtctgcacctccctgaaggatgaagaagggttcctgagggac
ttgtgtgaggtgctgctctaccttttactacctcctggagacttccacaacaagaacatg
agatacttcctcagggagattctggcgcgaggcgttctccttcctctggtcaaccagctg
agtgatcctgattacatcaaccagtttgttatctggatgatccgggactctagctgtaac
tacgaggcgtttatgaacatcttgaagctgacagacaaagtgtctgagctggaggctgtt
aaagacaaggccctggaggaactacagtacctacgatcactggacaccgcaggagatgat
atcaatgttataaagaatcagatcaacagtctgttgtttgtgaagaaggtctgtgagacc
aggatacagaggctacagtcagggaaggaagtggatactctaaaactagcagctaatttc
gacaagctgtgcatcataccactggaacacatccttgttcacaacatcgccttgcaattc
tttatggactacatgcaggcggctggggcccaggcagagctgttcttctggctgacagtg
gagggctacagagtaacagcccagcaacaactagaggtgatggagggatggcagaaggat
ggaaagaagggaggttccactcaaggactgctgaaggctgcagcattaggggtctatgaa
cagtacctgtctgataaggcgtcccccagggtgcaagtagatgaggtgtctgtagtcaaa
ctaagagagaagctacagaaggaaggagaccccacgccagagatattcgacgagatccag
agaaaagtgtatgacatgatgcttcgtgatgagaggtactacccgtcgttcagacagagt
cccctctacatcaggatgttagctgaactggacatgctcaaagaaccgtcttatagagga
tcagatgacggagatggagaatcgttcaacggttctccaacaggaagcattaatctatcc
ctggatgacctttcgaattcctgccatgacgacaatatacagctacacgccttcatctct
gacacagtagctgatgcttgtctccccggggctgggttgggtatggggttggggctgctg
ggtgctacaggggtgtgtaatgaccacggcaagacctacgccctctacgccatcaccgtg
tgccgccgtaaccacgacggcagcgaggactcctggaaaacctaccgccgctactccgac
ttccacgacttccacatgaggatcacggagcaggtaaagtttgagaacttgatgtcgatc
ctgaagctgccagggaagaagacgttcaacaacatggacagagacttcctggagaagagg
aaaaaagatctcaacgcatacctacagctgctgctgaatccagagatgatgaaggcctat
cctactctggttcactatgtctatgacttcctggagaataagcaatacagcaagggcaag
ggagacttcgcacgcaagatggatacgtttgtgaacccactgcgtagctcgatgcgtaac
gtgtccaacgcagtgaagagactaccagatagtctggctgaagggatgaacactgctgct
gataacatgggacgcatgtcagagaaactgggccaggacatcaaacagtccatgttcaag
gtgcctccactgctccccaagtctaacgttgacccagagcactgccgagtctcagcccag
ctggacgacaacgtgtgtgttttccaggtggatgataacatccccctgcgtgtgatgctg
ctgctgatggatgaggtgtttgacctgaaggagaggaaccagtggcttcgcaggaacatc
aagaaccttctgcagcaactcatcagagccacatacggagacactatcaacaggaagatc
gttgatcatgtggacttcatgacagctccagaacaggtggcagactacgtcaagaagttc
agggattcatactggcccaacggaatcctagcagagtctccaccccgccgggacaagaac
atccgcatgaggacacgggtcgccgccaagaccaacctattgggaatcatgccagatgag
ttgaagcacatcataggggcggatacgactcgtaaaggcatccttcgtgtgtttgacatg
ttccaacacggaccaatgaatcgtcggctggtctacgtgctcctagaaggattcctggag
accatgttccctcagtacaagttcccagagctgtttgtcaaactgcattcccgttcgccg
cgcacggccagatatacacagaaactcaagagcacctccctgaagaggtga
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