Oncorhynchus mykiss (rainbow trout): 110496541
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Entry
110496541 CDS
T07259
Symbol
atxn1a
Name
(RefSeq) ataxin-1a
KO
K23616
ataxin 1/1L
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
110496541 (atxn1a)
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Gene cluster
GFIT
Motif
Pfam:
ATXN-1_C
AXH
Motif
Other DBs
NCBI-GeneID:
110496541
NCBI-ProteinID:
XP_021428173
UniProt:
A0A8C7PN16
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Position
18:complement(54048864..54244155)
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AA seq
826 aa
AA seq
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MKSNQERSNECLPPKKRDFPASTVDERPLVMAPASESQRGENLAWLASVASGHNSGHNRD
SGGGGLDGSRGGQRISTPIESDGPQYKPLCSTITTHTDFLVPSSICSISSSSSSSHQSRV
VTTSLPAMYTSALSQPGGTIQYTQLPPNVQFISSPYTGPYAGYISSQLLSPPPPTSTSQR
SHPDPYPNTTITSQSQISGSSLSLAPQTAPSPHGGTHHLPLHLHSHPHHTLALSGGSQVL
VQYTGPGPEGPLTKREEGRPRELHNGDQRGRYERKENKGTPSSSSSSSSQYHQLHQQQSA
QHHYEAYTSHDASGQRTSLMLVPNSRGGPDNHSPDKLRPSAASHTEKGSLLLGKPVSCTP
SSSSTFTFPPPLSVESLKAAVSSLSPHTHTVIQTTHSASEASPLSLGQLSTNTNFYQAGP
GGQPIIGYLAGSAGGQRYHTSLPQHLLIPGAPGSQPIIIPVSGAGVTSLEAGHAAHIATT
TQPQSFPTTLPHTYFTNTTNPNPNPKDEHLFEVPAPYPPLSHPAGVGGTVVQAQLHLPVV
PAPTAPSSAPSSAPSLPPYFIKGSIIQLADGELKRVEDLKTEDFIQSAEISSELKIDSST
VERIDGSHTSNFAIVQFSVGEHRAQVSVEVLLEYPFFVFGQGWSSCCPDRTTQLLELPCT
KLSVGDVCISLTLKNLRNGSLKKTQQTQNQAIEITTSCNMGSIHGPLKSSRSARHGEQEN
GVGQRGSRSGCGRVVVGVGGGVQIASENGELRFGAGGEANSKGGQPGDSESSGGAAKPVS
RKRRWSAPEGRKVERSEKEPPLTLPKPSFITQEVKISIEGRSNIGK
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgaagtccaaccaggagcgcagcaacgagtgtctgccccccaagaagagagatttccca
gctagcactgtggacgagaggcccctggtgatggcgcctgctagtgagagccagcgcgga
gagaacctggcatggctggccagcgtagccagcgggcacaacagcgggcacaatagagac
agtggcggaggtggcctcgatggcagtagaggtgggcagcgtatcagcactcccattgag
tctgacgggccacagtacaaaccgctatgctccaccatcaccacacacacagacttcctg
gtcccttcctctatctgttccatctcctcctcctcctcttcatcacatcagtccagagtg
gtgaccacatccctccctgccatgtacacctctgctttgtcccaaccaggggggacgatc
cagtacacccagctgccccccaatgtccagttcatcagttccccttacacagggccctac
gctggctacatctcctcccagctcctctctccccctccacccacctccacatcccaacgc
tcccaccctgacccataccccaacaccaccatcacctcccagtcccagatctctggttcc
tctctgagcctggccccccagactgctccctcgccacacggtgggacccaccacctgccc
ctccacctgcactcccacccccaccacaccctggccctcagcgggggctcccaggtgctg
gtccagtacacaggccccggccctgaggggcccctgactaagagagaggagggccggccc
agggagttgcacaatggagatcagaggggccgctatgagagaaaggaaaacaaaggaacc
ccctcctcttcttcctcctcttcctctcagtaccaccaactccaccagcagcagagcgcg
cagcatcactatgaggcctacacttcccatgatgcatcagggcaacggacctctctaatg
ctagtgcccaacagccgcggaggaccagacaaccacagccccgacaaactacggccatcc
gccgcctcgcacacagagaaaggcagcctccttctgggtaaacctgtgtcctgcaccccc
tcctcctcctccacgttcaccttcccccctccgctcagtgtggagagtcttaaggcggcc
gtcagctccctgtcccctcacacccacacagtcatccagaccacacacagcgccagcgag
gcttcacccctctccctgggccaactctcaaccaacaccaacttctaccaggctggcccc
ggcgggcagcccatcatcggctacctggctgggagtgcaggagggcagcggtaccacacc
agtctgccccagcacctgctcatcccaggggccccagggtctcaacctatcatcatcccc
gtcagtggggccggggtcaccagcctggaagctggccatgctgcccacatagccactaca
acccagccacagtccttccccaccacgctaccccacacttacttcaccaacactaccaac
cctaaccccaaccctaaagatgagcatctatttgaggtcccggcgccctacccccctctc
tcccaccctgccggggttggaggcactgtggtccaggcccagctacacctcccagtggtc
ccagctcccacagccccctcctcagctccctcctcggccccgtcgctgcctccctacttc
atcaagggctctatcatccagctggcagacggggagctgaagcgcgtggaggacctgaag
acggaggacttcatccagagcgctgagatcagcagcgagctgaagatagactcgtccact
gtggaacgcatcgatggcagccacacgtccaacttcgccatcgtacagttctccgtgggt
gaacaccgcgctcaggtgagtgtggaggtgctgttggagtatcccttcttcgtattcggc
cagggctggtcatcgtgctgcccggaccggaccactcagctgttagaactaccctgcacc
aagctctcagtgggggacgtctgcatctccctcaccctgaagaacctgaggaacggctcc
ctgaagaagacgcagcagacccagaaccaggctattgagatcactaccagctgcaatatg
ggctccatccacggccccctcaagtcctccaggtcagccaggcacggggagcaggagaac
ggggtgggccagagaggctccaggagtggatgtgggagagtggtggttggagtaggtgga
ggtgttcagatcgcctcagagaatggggaactgaggttcggcgccgggggagaggccaac
tcgaaaggaggccagcctggagattcagaatctagtggtggtgccgccaagccggtgagc
cgcaagaggagatggtcggcccccgagggccgtaaggtggagaggagcgagaaggagccc
ccgttgactctgcccaaaccttcctttatcactcaggaggtaaagatcagcatcgaaggc
aggtcaaatataggcaagtag
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