Oncorhynchus mykiss (rainbow trout): 110496565
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Entry
110496565 CDS
T07259
Name
(RefSeq) homeobox protein Hox-A3a
KO
K09303
homeobox protein HoxA/B/D3
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110496565
Transcription factors [BR:
omy03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
110496565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4074
Homeodomain
Homeobox_KN
DUF7255
Motif
Other DBs
NCBI-GeneID:
110496565
NCBI-ProteinID:
XP_021428210
Ensembl:
ENSOMYG00000012659
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All DBs
Position
18:complement(57073462..57109628)
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AA seq
422 aa
AA seq
DB search
MQKATYYDSSAIYSGYPYQSANGFSYDANQVQYPRASHVESEYHRPACSLQSPDGLVALQ
KPGEMAENCDRGTAIQAAQPPVLTETNQPQMSVSVPPPPPQSQSPGSLNQNTSNGSCQPN
SKSSVHSSPTTTRKHIFPWMKESRQNQKPKTSSSSSVESCPGDKSPPGGSAASKRARTAY
TSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKGCGMMPS
PGGQSPRSPLGPSPGGGGGGYLNSMHSLVNSVPYESQSPTSYNKPAHNAYGMPTSYPPPL
NSSLNNCPPSQKRYPGTGGSATPEYDAHPLQGNGGYGTHLQQVSPVYVGGGYIDSMPNNR
ASVFGLTHLSHPPSTNMDYNGAITMGNSHHQRVCDPNPTYTDLNTPHYSQGRIQEAPKLT
HL
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaggcaacctactacgacagctccgcaatttacagtggctacccgtatcaaagc
gcaaatggcttcagttatgatgccaatcaggtccaatatccccgggcctctcatgtggaa
agtgagtaccatcgaccagcctgctccttgcagtccccagacggcttggtcgccctgcag
aaaccgggggagatggcggagaactgcgataggggtacggccatccaggcagcgcagcca
cccgtcctcactgaaaccaatcaaccgcagatgtcggtgtctgtcccaccaccccctccc
cagtcacagtcccccggttctctcaaccagaacacgagcaacggctcctgtcaacccaac
tcaaagagctcggtgcacagctcgccgaccaccacccggaagcacatcttcccctggatg
aaagagtcccgtcagaaccagaagcctaaaaccagtagctccagctcagttgagagttgc
cctggagacaagagccccccgggcgggtcagccgcgtcgaagagagcccggacggcttat
accagcgcacaactggtggaactggaaaaggagttccacttcaaccgctacctctgcaga
ccccgcagggtcgagatggccaacctgctcaacctcacggagaggcagattaagatctgg
ttccagaaccgcaggatgaagtacaaaaaggatcagaaagggtgtggcatgatgccctct
cccgggggacagtcccctcggagccccctcggcccatcacccggaggcgggggtggagga
tacctcaactctatgcattctctggttaacagtgtaccctatgagtcccagtcgccaacg
tcttacaataagcccgctcataatgcatacggtatgcctacgtcatatccccctccattg
aacagctccctaaacaactgcccgccctctcagaagaggtatcccgggactggcggctcg
gccacgcccgagtatgacgcgcatcctcttcaaggaaatggcggctatgggacgcacttg
cagcaggtcagccctgtgtatgtaggcggaggttacatcgattcgatgcccaacaacagg
gcctccgttttcggcctgacccatctctcgcacccgccgtccacaaacatggactacaat
ggagcaatcactatgggcaatagtcaccatcaaagagtgtgcgatccaaacccgacatac
acagaccttaatacgccgcactactctcagggaagaattcaggaagcgcccaaactgaca
catctgtag
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