Oncorhynchus mykiss (rainbow trout): 110496586
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Entry
110496586 CDS
T07259
Symbol
tra2a
Name
(RefSeq) transformer-2 protein homolog alpha
KO
K12897
transformer-2 protein
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110496586 (tra2a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
omy01009
]
110496586 (tra2a)
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omy03041
]
110496586 (tra2a)
Protein phosphatases and associated proteins [BR:
omy01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
110496586 (tra2a)
Spliceosome [BR:
omy03041
]
Common components
Common spliceosomal components
SR proteins
110496586 (tra2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FMP27-BLTP2_C
Spem1
Motif
Other DBs
NCBI-GeneID:
110496586
NCBI-ProteinID:
XP_021428237
Ensembl:
ENSOMYG00000013042
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All DBs
Position
18:57642685..57648819
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AA seq
316 aa
AA seq
DB search
MSDIEDGNFDGRGSRSPSKSDRGSPVRVKSESRSGSASPSRAAKHSESRSRSKSRSRSRR
HSNRRYSRSRSPSNRKKSRSYSPEYRKKKSQSESPNRRHTSSRSHDFRKETFGQGAGGDE
DARANPDPNQCLGVFGLSLYTTEKDLREVFGRYGPLAGVNVVYDQRTGRSRGFAFVYFER
IDDSKEAMERANGMELDGRRIRVDFSITKRAHTPTPGIYMGRPTHNGGGGGGGERNSGSS
GGGRRGRDSYDRYDDRRGGGYDRGYDRGYDRGDRGGDRGYDRYDEYDKYSRRRSPSPYYS
RYRSRSRSRSYSPRRY
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacattgaggatggaaacttcgatggacgaggctctcgctccccatccaaatcg
gaccgtggcagtcctgtccgggtcaagtcagagagcagatccggctccgcgagcccatca
agggccgccaaacactcagagtctcggtcccgctctaagtccaggtctcgctctcggagg
cactccaaccgcaggtacagccgctctcgctccccctccaaccggaagaagtcccgttcc
tacagcccggaataccggaagaagaagagccaaagcgagtcacctaaccgccgccatacc
agcagcagaagccatgacttcagaaaagagacattcggtcagggagcaggaggtgatgag
gatgccagggcgaaccctgaccccaaccagtgcctgggggtgtttgggctgagcctgtac
accacggagaaggacctgagggaagtgtttggccggtatggcccgctggccggggttaac
gtggtgtatgaccagcgcaccgggcgctcccgaggctttgccttcgtctacttcgagagg
attgacgactccaaggaggcgatggagcgtgccaacggtatggagctggacgggagacgt
atcagagtggacttttccatcaccaagagggcccacacccctacgcctggcatctacatg
ggccgacccacacataatggtggtggtggtggtggaggagagcgaaacagtggcagcagt
ggtggagggaggaggggccgggactcgtacgaccgatacgatgatcgacggggcggcggc
tacgaccgtggatatgaccgtggatacgatcggggagaccgaggtggagaccggggatat
gacagatatgacgagtacgacaagtacagtcgcaggcgctctccctctccctactacagt
cgatacaggtcacgctccaggtctcgctcatacagcccacgacgatactaa
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