Oncorhynchus mykiss (rainbow trout): 110496613
Help
Entry
110496613 CDS
T07259
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03013
Nucleocytoplasmic transport
omy03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110496613
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
110496613
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110496613
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110496613
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
110496613
NCBI-ProteinID:
XP_021428284
Ensembl:
ENSOMYG00000006993
UniProt:
A0A8C7VBH5
LinkDB
All DBs
Position
18:complement(58824211..58852541)
Genome browser
AA seq
1419 aa
AA seq
DB search
MAATGGGKIRSRRYHIASKPYAKSKQQQSGLISRVTDTVKSIVPSWMQKYFTNGEATEGG
GAMLGEEPNSQAPPNGSEEVDPLPDGRDSAEPATSNTEPSTSRVSLNFQDVLSRPPLNRS
HLHFPSLDSTPALGSPSSLFSQPSTSSAPFAGGPFAGASTSFSLVKELKDNSSHHEDDNI
STTSGFSSRASEKEVPNFKTTSLPQLCSPEMDRPQQSQSSLKKPAFNLSVFGTSSAVSVS
QSSQSSTSTLNSSVLNSSQLGDSPFYPGKTTYGGAAAVRTARSRTATPYQAPLRRQIKAK
PAGAPPCGVTSATARRILQSLERMSSPLADAKRIPSTVSSPLSKFPDGSTLDLSHFQAPK
KRLDSPLPPVQKLVIPAAALVSGSRSMSFRPSLTPGGLAQTPVGTPTRQSPLIPEAVADP
CQSTSSSSLPTYPLSSTPATSSTGSGGGKMKRERTSTRPSSKRPEDEIAELPALPANTSI
GLPSFSFPNPKPVVTTTPVLVEPVTNEVPLTTAPSTPPSTPFTFSSPIVMTTAASPPSFS
PSSGFTFSAPVVKTGLSLSNGKMVTPVVAAVKHAASESMEEFEGPFKPAKMLKQGSVLEL
LKGPGFAVPVTQTSPVPKAPQETPVMSTAPSLGDLFKAPTGSWDCDVCMVRNKPTATKCV
ACMTPHPNSTLAKTDSEHFTTLSGLEGSTTTTAAGFGALFTKSAGSWDCDTCLVQNKPQA
VKCVACETAKPGTGVKATLTLHAFSEAKTLPAAAPFLGFGDKFKKPEGAWECDMCMVQNK
AQDIKCVSCMSTKPGVTAATPSLTPAPVSITPLLGFGAQFKKPDGAWECDVCCVQNKGVD
QACVACQTPKPGALVEPKAFGSSSFGIQSLSDTCSGGFKFGMGVSSDSASGSGGFKFGGT
LSDSSSGGFKFGAAASSDTTSTDTSSSAGFKFGSSTEGFKFGASTASTPAADEGRKAEAL
SMGAGFKFGISGGITFGTTSAASTESKPSDGRFSFGLSKPTTTTSTLSLPVSTENDSGAS
TETTTTASAPIFGKLAEPPTLATPLGGSIFEELLEKDKDPFTFGKPEKEASMGSGFLFSA
ASKGAEASAPSGGFSFFMVDPSADQPKAPTFTFGKLADSETPAAKAPKPSFSFGQSATDA
AASKPVFGFMSTTTTSTSTTPAPRLFGPTSSTTPAPIPDPSTFLFGQSASSEATPAKSFL
FGQSQDSLPAPAASLNPGPAQPFLFGSGPNTAAPSFAFGAAPLSTALTTAPSAAPAQFVF
SPASSSGFGSGQAPTFGQGTSQPNAPAFGSPAPSPFSATASQPPAFGGKANSVPVFDHQA
NSTPAFGSSTPAAPGGGFQFGGVGAFGTSSNSTGVFAFGGVPGGSPASSATPSMAPQPSA
PGGGFNFIGSTKSTTFTAAPAGQNSIARRKIKTAVRRKK
NT seq
4260 nt
NT seq
+upstream
nt +downstream
nt
atggctgccacgggtggagggaaaattagaagcagaagatatcatatcgcttctaaacct
tacgccaaaagcaaacagcagcagtcgggcctgattagtcgagtgacagacacagtcaag
agcatcgttccttcctggatgcagaaatacttcacaaacggggaggctacagaaggggga
ggggccatgttgggggaggagccgaacagtcaggcccctcctaatggcagtgaggaggta
gacccccttcctgatggacgggactctgcggagcccgctaccagtaatacagagccttcg
acaagcagggtatccctgaacttccaggatgttctgtcgaggccccccctcaatcgctcc
cacctccatttcccctccctggactccaccccggccctggggagcccaagctcccttttc
tcccagccctccacctcctccgcccccttcgctgggggccccttcgctggggcgtcgaca
agcttctccctagtcaaggagctcaaggacaatagctcccaccacgaggatgacaatatc
tccaccaccagtggcttctcatcacgcgcatcagaaaaagaagtaccaaactttaagacc
acgtcgctaccccagctctgttctccggagatggaccggccccagcagtcccagtccagt
ctcaagaaacctgcattcaacctgtctgtctttgggacttcctccgctgtgagtgtcagt
cagtcaagtcagtcctccacttccacgttgaacagttcagtgctgaactccagtcagttg
ggggattcccccttctacccagggaagactacctacgggggagcagctgctgttagaaca
gcccgctcacgcacagccacaccttaccaggctccattgcggagacagatcaaggccaag
cctgctggggctccgccctgtggggtgaccagcgctactgcccgacgcatcttacagtcc
ctggagcgcatgtccagccccctcgctgatgccaagagaatcccctctacggtgtcctct
cccttgtcaaaattccctgatggcagcactctggacctttcacatttccaggcccccaaa
aaacggctggactctcccctccccccagtccagaagttggttatcccggctgcagcgttg
gtgtctgggagccgctcaatgtccttcaggccctctctgacccccgggggcctggcccag
acccccgtaggcacgcccacaagacaatcccctctgattcctgaagcagtggcagatcct
tgtcaaagcacaagcagcagcagcctgcccacctaccctctgtccagcactcctgcaacc
agcagcacagggtcaggaggagggaagatgaagagggagaggaccagcacaagaccctcg
tccaaacgacctgaagacgagattgctgagctaccggccctgccggccaacacctcaatc
ggtctgcccagcttcagcttccccaaccccaagcctgttgtcactaccacacccgtcctg
gtggagcccgtcactaacgaggtgccactgactacagcaccctccacccctccctccaca
cctttcactttctcctcccctattgtcatgacaactgctgctagcccaccatccttttcc
ccgtcttctggatttaccttcagtgcacctgtagtgaaaacgggtctgtcactatccaac
gggaagatggtcaccccagtagtggcagcagtgaagcatgctgccagtgagagcatggag
gagtttgaagggccatttaaaccagccaagatgttgaaacagggcagtgtgctggagctc
ctcaaaggacctgggtttgccgttcctgttactcagacctctcctgtccccaaagccccc
caggagaccccagtcatgtccactgccccctcccttggggacttgttcaaagcgccaaca
ggctcctgggactgtgacgtctgcatggttaggaacaaacccactgccacaaagtgtgtg
gcctgtatgaccccacatccaaactctactttagcgaagactgacagtgaacacttcaca
acgttgtccgggctggagggttccaccactactaccgctgctggttttggagccctgttc
acaaagtctgcgggaagctgggactgtgacacttgtctggttcagaacaagcctcaagca
gtcaaatgtgtagcttgtgagacagccaagcctgggactggagttaaagccacactgact
ctgcatgccttctcggaggctaagactctgcccgctgctgcccccttcttgggcttcggg
gacaagtttaagaagccggagggagcgtgggagtgtgacatgtgcatggtgcagaacaag
gcgcaggacatcaagtgtgtttcctgtatgagcactaagccaggagtgacggcagcgact
ccgtctctaactcccgcccctgtcagcatcactcctctactaggctttggggcccagttc
aagaagccagatggagcgtgggagtgtgacgtgtgctgtgttcagaacaagggagtagac
caggcgtgtgtggcctgtcagacccccaagcctggggctttagtagagcctaaagcattc
ggttcctcgtcatttggtatccagtccttgtctgacacctgctcagggggattcaagttt
ggcatgggggtgtcatcggactcggcctctggttctgggggcttcaaattcggcggcacc
ctctctgactcctcttcagggggcttcaaattcggtgcagctgcctcatcagacaccacc
tcaacagacaccagcagctctgcaggcttcaaattcggcagctccacagagggcttcaaa
tttggagcatctactgcttccacccctgcagcggacgaggggaggaaggctgaagccctg
agtatgggtgccgggttcaaatttggcatcagcggtgggatcacgttcggcactacatca
gctgctagcacggagagcaaaccctcggacggaaggttctcctttggactatcaaaaccg
acaaccaccacctctactttaagccttcctgtctctacagagaacgacagtggagcttct
accgaaaccaccacaacagcatcagctcctatttttgggaagctggctgagcctcctacc
ctggccacaccactagggggcagcatatttgaggaattgctagagaaagacaaggaccct
ttcacctttgggaagcctgagaaggaggcctctatggggtctgggttcctgttcagtgct
gctagtaaaggggcggaggcatcggctccctctggaggcttttccttctttatggtagat
ccatctgcagaccagcccaaagcacctaccttcacatttgggaagctggcagacagcgag
accccagcagcaaaagcccctaagccctcattcagctttgggcaaagcgctacagatgct
gcagcctcaaagccagtgtttgggtttatgtcaaccaccaccacctctacttccaccacc
cctgcccccaggctgtttgggcccaccagcagcactaccccagcccctatcccagacccc
agtaccttcctgtttgggcagagtgcctccagtgaggccaccccagccaagtccttcttg
tttgggcagagccaggacagcctgcctgcccctgcagcttccctgaaccctggcccggct
caaccattcctgtttgggtctggacctaacactgctgctccctccttcgcttttggagcg
gcaccgctctccactgccttaactacagctccatcagcagcccctgctcagtttgtattc
agccctgcctcctcctctggctttgggtcgggacaagctcctacctttggtcagggtacc
tcccagcccaatgcccctgcgtttggttctcccgccccgtcccccttctctgccacggcc
tcccagcccccagccttcggggggaaggccaactctgtccctgtgttcgaccaccaagcc
aactccacgcccgcttttggctcatccacccccgccgcaccaggtggaggtttccagttt
ggaggagtcggtgcgttcggcacgtccagtaacagcacgggggtgtttgctttcggaggg
gtaccaggagggtcccccgcctcttctgccacgccctccatggcaccccaacccagtgca
cctggaggtggctttaactttattgggtcaacaaagagcaccaccttcactgcagcccct
gcaggacagaactcaatcgctagacgcaagatcaaaacagcagtccggcgtaagaagtaa
DBGET
integrated database retrieval system
