Oncorhynchus mykiss (rainbow trout): 110496667
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Entry
110496667 CDS
T07259
Symbol
recql4
Name
(RefSeq) ATP-dependent DNA helicase Q4 isoform X1
KO
K10730
ATP-dependent DNA helicase Q4 [EC:
5.6.2.4
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
omy03032
]
110496667 (recql4)
03400 DNA repair and recombination proteins [BR:
omy03400
]
110496667 (recql4)
Enzymes [BR:
omy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
110496667 (recql4)
DNA replication proteins [BR:
omy03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
110496667 (recql4)
DNA repair and recombination proteins [BR:
omy03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
110496667 (recql4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
Drc1-Sld2
zf-CCHC
ResIII
zf-CCHC_3
zf-CCHC_5
Motif
Other DBs
NCBI-GeneID:
110496667
NCBI-ProteinID:
XP_036809355
Ensembl:
ENSOMYG00000012427
UniProt:
A0A8L0DPU2
LinkDB
All DBs
Position
18:61967906..61991797
Genome browser
AA seq
1571 aa
AA seq
DB search
MDRYNDVKILLKTWEQSFVQENQRKPNKGDIDAAPEEAKKLYKEYRTLKQAKENGSNGHT
DPTPTAQTQSSEKESDCWGTHLNRKSMPVAAPKLTLTPKDKESLQASAQYFGMKLKSNLG
ALTKERPVSLKKSFTPRRTPLKSWKDGQSPNPAAGAAGSDTLLSPLLKPANTRPHLLACP
VQTGTEHPHQPFEPIPAFTPSKLWSPAAGASSSDRPAGSRAQQLRQTFTKRLSSVDSSWL
ERCQVFDEVGVAEKPVVGNLSLAVVSAVDSPQAKGGGVGEGENPGRAASSFVIPSMQNEG
TTLLGERASKSTMPQALPFSDEQQPKIGCGVTSAAVPASLRSTGQHSSLGSGSGEGKDGE
TRPGLRGQAEGGTSEETAIGASTAKKSRARARKGRVGRVEEEAEVSTQPPQKAEGDELGT
EKKGTKKKAKKRQRDLDTDGETPDDTEKEGAVKKRRTKKVTEATLDGRSPKKVPRVRKKK
AQTGDGNASEQGSGDVTEKEAVKQKPRLPQENLLGEVDEEDVKAARNRGSNTMRPKPIKN
SDCNFVKLNLKNKSHVKGYACRGAGLRKQLTMEKFQLKGERFGGPDSRFRGGRGRGGFRG
GRGRGGFRGGFGGFNRPGDPCFKCGGTGHWAMNCKGRVGAPADSAAADDASAVEEPFELP
TLEEVARATGTLRSEPRVAPPIVKEENEGLGEKQQQEDGGDEVLLNVIRPDYERLLPPPP
MQPLYPLGEDGKVQAVPSEVNEALKDFGYKSFRPGQEQAIMRILSGLSTLVVLSTGMGKS
LCYQLPAYLYAQRSNCITLVVSPLVSLMDDQLSGLPSKLKAAAIHSNMSKKQREVAIEKV
KAGEVHVLLLSPEALVGGGHSGPGCLPPADQLPPVAFACIDEAHCVSEWSHNFRPCYLRL
CKVLRDRLGVRCLLGLTATATLSTALDIAQNLGITDQDGVAVRSAAVPNNLQLSVSMDRD
KDQALVCLLKGERFGSLESVIIYCTRREETTRISALLRTCLQGVLLKESNRTASQEADDN
PVGKKKKALARKKIRKPLKWMAESYHAGMSSSERRRVQNNFMCGELRVVVATVAFGMGLD
KSDVRGIVHYNMPKSFESYVQEIGRAGRDGEPAHCHLFLDPEGGDLHELRRHIYANTVDY
YTVKKIVQKVFPPCRCRQIHQNQQDLARTQEEVDDSEMMELMDTCDENPVETPEHTTETG
QNTPVEQLEQAKVPTEDVSTFQPLDGEQKHPSESSVPFPQRGEHEEEEQTGGGDDWPTTR
VCHTHERAISMQDTVEALDITEEGLETLLCYLELHPQQWVELLHPTLSNCKMVCYNGPHQ
LRKLTKICPPVAVVLARKRLAGERVETCDSVDFDVVEVADTMGWQLGLVKRGLRQLQWAT
NRGVLVEFSNLSFYFRSYGDLTPDEMDRVCEFLHGRVVAQERTKLYQLKACFKAFRSVAF
KSCSFCTDKLDESRSLKLKGLLGDYFDKRRELDLSRKFQEEKDGEDEEELLLKCKMKDFE
GQIRADIQSFLGNRSDEKFSGRAVARIFFGIGSPCYPAQTFGRDKRYWRKYIQFDFNEII
RFAIQEIIRFK
NT seq
4716 nt
NT seq
+upstream
nt +downstream
nt
atggatcgatacaatgatgtgaagattcttctgaaaacctgggagcagtcatttgttcaa
gaaaatcaaagaaagcccaacaagggtgatattgacgcagccccagaagaggctaaaaag
ctctacaaagaatatcgaacactcaagcaagcaaaagaaaacggcagcaatgggcataca
gacccaacacctaccgcacagactcagtcatctgagaaggaatccgattgctggggcact
cacctgaaccgtaagagcatgccggtggctgctcccaaactgacgctgacgcccaaggac
aaggagtccctccaagcctcggcccagtactttggcatgaagctcaagtcaaacctgggt
gctctaacaaaggaaagacctgtttctctgaagaagtcgttcacgccacgtcgaacacct
ctgaagtcctggaaagacggccagagcccaaaccctgcagctggtgctgcaggcagcgat
acactgttatcccctctgctaaagccagccaacacacgtccacacctcctggcctgtcca
gtgcagacagggacagaacacccacatcagccctttgagccaataccagccttcacgccc
tccaagctgtggtctcctgcagcgggggcatcctcatcagacagaccggcaggaagtagg
gcccagcagctcagacagaccttcaccaagaggttatcctctgtagacagcagctggctc
gagagatgtcaggtgtttgacgaggtgggtgtcgcggagaagccggttgtgggtaatttg
tctctcgccgtggtgtcggcggtagattcaccacaggccaaagggggaggtgttggcgag
ggagagaacccaggacgtgccgccagttcctttgtcattccttccatgcagaatgaaggg
acaactctcctgggggagagggcttccaagagtaccatgccacaggctctgcctttttca
gacgagcaacagcccaaaattggttgtggcgtaacgtctgcagcagtcccagccagtctg
cggtccactggacaacactcctcattggggtctggctccggagagggaaaggatggagaa
accagaccaggtctcagaggacaggccgagggcggaacgtcagaagagacagccatcggc
gcctccaccgccaagaaatctcgagcaagggccagaaagggccgggtaggaagggttgaa
gaggaggcggaggtgtcgacgcagccaccacagaaggccgagggtgacgagctcgggacg
gagaagaaaggtacgaagaaaaaggccaaaaagaggcaaagggaccttgacacagatgga
gagacccctgacgacacagagaaagagggggcagtgaaaaagaggagaaccaaaaaggtt
acagaggctacacttgatggcaggagtcccaaaaaagtccccagagtgaggaagaagaag
gctcagacgggtgatggaaatgctagcgagcaggggagtggtgatgtcacagagaaggaa
gcagtgaagcagaaaccaaggcttccacaggagaacctcctaggagaggtggatgaggaa
gatgtcaaagctgccaggaacagagggagcaacactatgagacctaaacccatcaagaac
tcggactgtaactttgtaaagctcaacctgaaaaataagtctcatgtcaaaggatacgca
tgtaggggcgctggcctacggaagcagttgaccatggagaagttccagctaaagggggag
aggtttggaggaccagactcacggtttagaggtggaagaggcagaggagggtttagaggt
ggaagaggcagaggagggtttagaggtggcttcggagggttcaatcgtccaggggacccc
tgcttcaagtgtggaggcacaggacactgggctatgaactgcaagggcagagttggcgct
ccagcagacagtgctgctgctgatgatgcgtctgcggttgaggagcccttcgaactgcca
accttggaagaagttgcccgggcaacgggaactctgcgttccgagcctcgggtggcgccc
cccattgttaaagaggagaatgagggtctgggggagaagcagcagcaggaggatggtggt
gatgaggtcttgttgaatgtgatcaggccggattacgagcgcctgctccctccgcccccc
atgcagcccctctaccccctaggggaggacggcaaagtacaagcggtgccctctgaagtt
aatgaagcacttaaagactttgggtacaagtctttcagaccagggcaggaacaggccatc
atgagaattctatcaggtctgtccacgctagtggtgctctccacgggcatgggcaagtct
ctgtgctaccagctgcctgcctacctctatgcccagaggtcaaactgtatcactctggtg
gtgtcaccactggtgtctcttatggatgatcagctttctggacttccatccaagctgaaa
gcggctgccattcactccaatatgtctaaaaaacagagagaggttgccattgagaaggtt
aaggcaggtgaggtccatgtcctgctcctgtcccctgaggcgttggtaggtggaggtcac
tctggccctggctgtcttcccccagctgaccagctccccccggtggccttcgcctgtatc
gacgaggcccactgtgtctcagagtggtcacacaactttaggccctgctacctgcgtctc
tgcaaggtgttgagggaccgtctgggcgtgcgttgcctgttgggtctgactgccaccgcc
accctgtccacagccctggacatcgctcaaaacctgggcatcactgaccaggacggtgtt
gctgtccgctcagccgccgtgcctaacaacctgcagctgtctgtctccatggaccgagac
aaggaccaggccctggtgtgtctgctgaagggagagcggttcgggtctctggagtccgtc
atcatctactgcaccaggagagaggagacgacccgtatatctgccctgctcaggacctgc
ctgcagggggtgctgttgaaggagtctaaccgtacagctagtcaggaggcagatgacaac
cctgtagggaagaagaagaaagctttggccaggaagaagatccgtaagcctctgaagtgg
atggctgagtcctaccatgccggcatgtcgtcctccgagcgccgtcgcgtccagaacaac
ttcatgtgtggtgagctgcgagtggtggtcgccacggtagccttcggcatgggcctggac
aagtcggacgtgcgcggaatcgtgcactacaacatgcccaagagctttgagagctacgtg
caggagatcgggagggcagggagagatggggaaccggcccactgtcatctcttcctggat
cctgagggaggagacctgcatgagttgcggaggcacatctatgccaatacggtggattac
tatactgtgaagaagatagtgcagaaggtgtttcctccctgcaggtgcagacagatccac
cagaaccagcaggacctagccaggactcaggaggaggttgatgactctgagatgatggaa
ctgatggacacctgtgatgagaacccagttgaaacaccggaacacacaacagagactggt
cagaacacccccgtcgagcagttggaacaggccaaagttcctactgaggatgtatcaact
tttcaaccactggacggggagcagaaacacccatcagagtcaagtgttccatttccccag
agaggcgaacatgaagaggaggagcagacagggggaggtgatgattggcccacgactagg
gtgtgtcacacccatgagagggccatatctatgcaggacactgtggaagccctggacatc
actgaggaaggtttggagactctgctgtgctatctggagctgcaccctcagcagtgggta
gagctgctccaccccaccctctccaactgtaagatggtctgttacaacggcccgcatcaa
ctccgcaaactcaccaaaatctgcccacctgttgccgtagtgttagcccggaaacggctg
gcaggggagcgagtggagacctgtgattcggtcgactttgatgtggtggaggtggcagac
actatgggctggcagctgggtctggtgaagagaggcctcagacaactacagtgggccaca
aacagaggagtcttggtggagttctccaacctgtccttctacttccgttcctacggtgat
ttgaccccggatgagatggaccgggtgtgtgagttcctgcatggcagggtggtggcccag
gagaggaccaaactgtaccagctcaaagcctgcttcaaggccttccgcagcgttgcattc
aagagctgcagtttctgtacggacaagctggacgagagcagaagcctgaagctgaaaggg
cttctgggggattactttgataagaggagagaactggacctgagcaggaagttccaggag
gagaaggatggcgaggacgaggaggagctgttgttgaaatgcaagatgaaggacttcgag
ggtcagatcagagcagatattcagagtttcctgggcaaccgcagtgatgagaagttctct
ggcagagccgtcgctagaatattctttggaattgggagtccatgttacccagctcagacc
ttcggcagggacaagagatactggagaaaatacatccaatttgactttaatgaaatcatc
cgctttgctattcaggagatcattcgattcaagtga
DBGET
integrated database retrieval system
