KEGG   Oncorhynchus mykiss (rainbow trout): 110496696
Entry
110496696         CDS       T07259                                 
Name
(RefSeq) ribonuclease ZC3H12A
  KO
K18668  ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:omy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:omy03019]
    110496696
Messenger RNA biogenesis [BR:omy03019]
 Eukaryotic type
  mRNA degradation factors
   Other degradation factors
    RNases
     110496696
SSDB
Motif
Pfam: RNase_Zc3h12a UBA_6 Regnase_1_C zf-CCCH_4 zf-CCCH_2 UBA_N4BP1_C zf-CCCH
Other DBs
NCBI-GeneID: 110496696
NCBI-ProteinID: XP_021428404
Ensembl: ENSOMYG00000038385
UniProt: A0A8C7TLU6
LinkDB
Position
18:65013004..65028121
AA seq 697 aa
MKIGAISMLSPVKDVLPWKEFSHIARLSPTEPHDTVGWLSTLPALHSHHPPCPICERMHP
SGTHCSAPEESGKTSTEPGEAQLDFYLKLGYSPAQVWTVLQKFGLNTDTNRVLGELVRTG
ASLEGIEKEQEKEGAPSILVGRGETLSNLPLTPPPSRGDVPSEEGDALRPIVIDGSNVAM
SHGNKEMFSCLGIQLAVNFFLDRGHTDITVFVPSWRKEQPRPDVLITDQHILRELERKKI
VVFTPSRRVAGKRVVCYDDRFIVKLAHETAGIIVSNDTYRDLQGERQDWKRFIEERLLMY
SFVNDKFMPPDDPLGRHGPTLENFLRKVPRLPRKQPCPYGRKCTYGMKCKFYHPERANQS
RCSLADELRKKAKLSLSEQKHPTAGAGPAYGLSLEEGTAQKLPLEQRNGSLKKGHISENV
LLIKGSHLSSQRSPTKKDKTNRHLTNLDLAMPSGSQSPTDLDSALPSGSQERLDSGLGSF
ESQVSDPSRDHCDRYGNAGFRNCLSPPSMRQQIYSLPSNLPSSCSSHPPQPLLGPSTGYQ
QHRSRGPASTHNNTHSPHHSMGPASTYHPGKITYSPTYYLSYGAPIYPVGEHQYRYPNDF
QQENRAQPPQQTYWSDPFGTYPQTLHSTAQMEKQRHWLLPQTQPHPHGESREREEVRKKL
LAIFNGRLVDKVMDMFPQLMDPQRLAAEILILQSPGL
NT seq 2094 nt   +upstreamnt  +downstreamnt
atgaagattggtgctatctcaatgctgagcccggtcaaagatgtcttaccatggaaagag
ttctcccacatagcccgtctgagccccacagagccccacgacacagtcggatggctgtcc
actctgcctgcccttcacagtcatcatccaccctgtcccatctgtgagagaatgcaccct
agtggtacccactgctctgccccggaagagagcggcaagacctccacagaacctggagag
gctcagctggacttctaccttaaactgggctactccccagcgcaggtctggaccgtgttg
cagaagtttggcctgaacacagacactaacagggttctgggggagctggtgcggacggga
gccagtctagaagggattgagaaggagcaggagaaggagggagccccgtctatcctggtg
ggccgaggggagaccctcagtaacctgcccctcacccctccacccagccggggcgatgta
cccagtgaggagggtgatgccctgagacccatagtgatcgatgggagcaacgtggctatg
agccacgggaacaaggaaatgttttcctgcctgggaatccagctggcggtaaacttcttc
ctggacagaggtcatacggacatcactgtgtttgttccctcatggaggaaggagcagcct
agaccagatgtcctcatcacagatcaacacattttgcgtgagctggagaggaagaagatc
gtggtgttcaccccttcgcggcgtgtagcgggcaaacgtgtggtctgctatgacgatcgc
ttcatcgtcaagctggcgcatgagaccgccggcatcatcgtgtccaacgacacctaccgt
gaccttcagggcgagagacaggactggaagcgcttcattgaggagaggctactcatgtac
tccttcgtcaatgacaagttcatgccccctgatgaccctctgggtcgtcatggtcccacc
ctggagaactttctacggaaggttcctcgtttgccacggaaacagccgtgcccttatggc
aggaaatgcacttatgggatgaagtgtaaattctaccacccggaacgagccaaccaatcc
cgttgctctctggctgacgagctgcggaagaaggccaagctatctttatcagaacaaaaa
caccccactgcaggtgctggacctgcctatggcctttctctggaggaggggacggctcag
aaactgcctctagaacagaggaatggctccctgaagaaaggccacatcagtgagaatgtg
cttctgatcaagggaagccatctgtccagccagaggtccccaactaagaaggacaagacc
aaccgacacttgaccaatctggacttggccatgcccagtggctctcaatccccgacagac
ctggactcggccctgcccagtggctctcaggagcgactagattctggtcttggctccttc
gagagccaggtgtctgacccctccagggaccactgtgaccgttatgggaatgctgggttt
aggaactgcctgtccccccctagtatgagacaacaaatctattccctgcctagcaacctg
ccttctagctgcagctctcatcctcctcagcctttactgggccccagcacaggataccaa
caacatcgcagcaggggcccagccagcacccacaacaacacccacagcccacatcacagc
atgggcccagccagcacctaccacccaggcaagataacctacagccccacctattacctc
agctatggggcaccgatatatccagttggggagcatcagtacaggtatcccaatgacttc
caacaggagaacagggcccaacctccacagcagacctactggtccgatccgttcgggact
tatcctcagactctccatagcactgctcaaatggagaagcagagacactggctcctccct
cagacacagccccacccccacggggagagcagggagagagaggaggtcaggaagaagctg
ctggctatctttaacggccgtctggtggacaaggtcatggacatgtttccccagctcatg
gacccacagagattggctgctgagatcctcatcctgcagtctccgggcctgtga

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