Oncorhynchus mykiss (rainbow trout): 110496696
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Entry
110496696 CDS
T07259
Name
(RefSeq) ribonuclease ZC3H12A
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110496696
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
110496696
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_4
zf-CCCH_2
UBA_N4BP1_C
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
110496696
NCBI-ProteinID:
XP_021428404
Ensembl:
ENSOMYG00000038385
UniProt:
A0A8C7TLU6
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All DBs
Position
18:65013004..65028121
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AA seq
697 aa
AA seq
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MKIGAISMLSPVKDVLPWKEFSHIARLSPTEPHDTVGWLSTLPALHSHHPPCPICERMHP
SGTHCSAPEESGKTSTEPGEAQLDFYLKLGYSPAQVWTVLQKFGLNTDTNRVLGELVRTG
ASLEGIEKEQEKEGAPSILVGRGETLSNLPLTPPPSRGDVPSEEGDALRPIVIDGSNVAM
SHGNKEMFSCLGIQLAVNFFLDRGHTDITVFVPSWRKEQPRPDVLITDQHILRELERKKI
VVFTPSRRVAGKRVVCYDDRFIVKLAHETAGIIVSNDTYRDLQGERQDWKRFIEERLLMY
SFVNDKFMPPDDPLGRHGPTLENFLRKVPRLPRKQPCPYGRKCTYGMKCKFYHPERANQS
RCSLADELRKKAKLSLSEQKHPTAGAGPAYGLSLEEGTAQKLPLEQRNGSLKKGHISENV
LLIKGSHLSSQRSPTKKDKTNRHLTNLDLAMPSGSQSPTDLDSALPSGSQERLDSGLGSF
ESQVSDPSRDHCDRYGNAGFRNCLSPPSMRQQIYSLPSNLPSSCSSHPPQPLLGPSTGYQ
QHRSRGPASTHNNTHSPHHSMGPASTYHPGKITYSPTYYLSYGAPIYPVGEHQYRYPNDF
QQENRAQPPQQTYWSDPFGTYPQTLHSTAQMEKQRHWLLPQTQPHPHGESREREEVRKKL
LAIFNGRLVDKVMDMFPQLMDPQRLAAEILILQSPGL
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgaagattggtgctatctcaatgctgagcccggtcaaagatgtcttaccatggaaagag
ttctcccacatagcccgtctgagccccacagagccccacgacacagtcggatggctgtcc
actctgcctgcccttcacagtcatcatccaccctgtcccatctgtgagagaatgcaccct
agtggtacccactgctctgccccggaagagagcggcaagacctccacagaacctggagag
gctcagctggacttctaccttaaactgggctactccccagcgcaggtctggaccgtgttg
cagaagtttggcctgaacacagacactaacagggttctgggggagctggtgcggacggga
gccagtctagaagggattgagaaggagcaggagaaggagggagccccgtctatcctggtg
ggccgaggggagaccctcagtaacctgcccctcacccctccacccagccggggcgatgta
cccagtgaggagggtgatgccctgagacccatagtgatcgatgggagcaacgtggctatg
agccacgggaacaaggaaatgttttcctgcctgggaatccagctggcggtaaacttcttc
ctggacagaggtcatacggacatcactgtgtttgttccctcatggaggaaggagcagcct
agaccagatgtcctcatcacagatcaacacattttgcgtgagctggagaggaagaagatc
gtggtgttcaccccttcgcggcgtgtagcgggcaaacgtgtggtctgctatgacgatcgc
ttcatcgtcaagctggcgcatgagaccgccggcatcatcgtgtccaacgacacctaccgt
gaccttcagggcgagagacaggactggaagcgcttcattgaggagaggctactcatgtac
tccttcgtcaatgacaagttcatgccccctgatgaccctctgggtcgtcatggtcccacc
ctggagaactttctacggaaggttcctcgtttgccacggaaacagccgtgcccttatggc
aggaaatgcacttatgggatgaagtgtaaattctaccacccggaacgagccaaccaatcc
cgttgctctctggctgacgagctgcggaagaaggccaagctatctttatcagaacaaaaa
caccccactgcaggtgctggacctgcctatggcctttctctggaggaggggacggctcag
aaactgcctctagaacagaggaatggctccctgaagaaaggccacatcagtgagaatgtg
cttctgatcaagggaagccatctgtccagccagaggtccccaactaagaaggacaagacc
aaccgacacttgaccaatctggacttggccatgcccagtggctctcaatccccgacagac
ctggactcggccctgcccagtggctctcaggagcgactagattctggtcttggctccttc
gagagccaggtgtctgacccctccagggaccactgtgaccgttatgggaatgctgggttt
aggaactgcctgtccccccctagtatgagacaacaaatctattccctgcctagcaacctg
ccttctagctgcagctctcatcctcctcagcctttactgggccccagcacaggataccaa
caacatcgcagcaggggcccagccagcacccacaacaacacccacagcccacatcacagc
atgggcccagccagcacctaccacccaggcaagataacctacagccccacctattacctc
agctatggggcaccgatatatccagttggggagcatcagtacaggtatcccaatgacttc
caacaggagaacagggcccaacctccacagcagacctactggtccgatccgttcgggact
tatcctcagactctccatagcactgctcaaatggagaagcagagacactggctcctccct
cagacacagccccacccccacggggagagcagggagagagaggaggtcaggaagaagctg
ctggctatctttaacggccgtctggtggacaaggtcatggacatgtttccccagctcatg
gacccacagagattggctgctgagatcctcatcctgcagtctccgggcctgtga
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