Oncorhynchus mykiss (rainbow trout): 110496699
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Entry
110496699 CDS
T07259
Name
(RefSeq) zinc finger protein 40 isoform X1
KO
K09239
human immunodeficiency virus type I enhancer-binding protein
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110496699
Transcription factors [BR:
omy03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
110496699
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-C2H2_jaz
NOA36
zf-C2H2_16
Motif
Other DBs
NCBI-GeneID:
110496699
NCBI-ProteinID:
XP_036809414
Ensembl:
ENSOMYG00000038495
LinkDB
All DBs
Position
18:65262573..65362710
Genome browser
AA seq
2753 aa
AA seq
DB search
MANFQQSPMAAVHSDKIEEAQKELKDPKASAQKGINECGRTSADNIKGLKRKKVVTENQL
KKIPKSPVKKPLQSKTSVATLQGTSSKEAVNSCSNPDSPSRNPASSPSRNRDTEYLRPVA
ESSEGVTSSIDSDRLKQREVSSSKPQSLDPVSGKEGSASGVGESEQLKDRKSGETGCEGD
ATYHTSAPLEVLLKAMESDFSSLAERNTRVPVTSVGKPIQTLSAQFISELNAMPAVHFGL
QTQPGHMQTYFVNKQESYTTMQASTQATALQNSQHATQYFSNREKPVLQMSFSTGPSAAR
THTPIPSGSNSLPKSQPPVVHTCQSLSASVPSTIQVPVTPGYNPVHMATVVNFGLEQMCS
ISPKHQKPKKQGKYVCEYCSRACAKPSVLLKHIRSHTGERPYPCVTCGFSFKTKSNLYKH
KKSHAHAIKLGLVARSDSGSGSLSVESDKAPGTHSDVEESGDSDEESSTADLDPDSSQGS
VAAFSESSLQSAGTTQGNHGDAGDLSAVFETLKPTTSQRSYESKGTAGLPKVVVYPVNVS
PQRADSPRVADCTPEQATAQKQRDFQTAHLRSSITVLSSVKEVDCTIPLQDARSEDEDQQ
CRSPPGGGHGQLQRQQATDFSQQQQQGKCLLSPRSLGSTDSGYFSRSESADQAMSPPSPF
VKLTPPTDMDVTKNALPNLPAVVATVMNVASVEKPHVVQGQMRPPLVTKALSLEERISKL
ISDNEAVVDDKQLDSVKPRRTSLSRRGSIDSPKSYIFKDSFQFDLKPMARRSSSSSDIPK
SPFTPTENSKPVLLLSVPNQYPPMDCLPITRSNSMPTTPGHSGLPPNVTQQPHILRICQS
FDEKMSSLNDDVFSSAPSNPNPAIHSRTLVRQVAVEHFSTSEVLTSVRSMDEGYHGSSVS
TVTMQRSRSFEHAQDPNRKPQQSKGTMYECETCRNRYRKLENFENHKKFYCSELHGPKNK
LMSVRETELDVFQRGMQQPLVPRTTGISGIMDQQQSIRKRRKMKSVGDDDDQSPTDTNPP
CSVSFDSCQLSTASSGRTFSQQSIMVDLLPKSNPPQIPQIQLIAGVTDATESRLSPIRET
QVNTSGKERGDLQRQGSGTSVIRHTNSLSRPNSFEISESIDRASPVDFLDKDGHSTGKTK
ADATANLSLESYHEKMSIPKCANQGVMENRVDHTLAAVAESCAAVQQSRLVRQNNIPEIL
VTEEPDREHDGHSTEQGEKAADTFNWPQRSESLSKLPTEKLPPKKKRIRLAQMEHSSGES
SVESSLSRSLSRDSSLSRCSSVSASFDWDEPFRSESPSRGECANKICDLQGLPIAFNTLG
VPGMMRRAASEQISCTQPSVEISCDYRSKSFDCGSGSPSRSLPPNRSMSPMELRKSAQTS
SSPHVPLIERRRGPLVRQMSLKIGPESQQHVGNHAIAVQRLPTVISISQQRPQQMQQTAN
NPPIAQPFILHSGETLLQHNEKMVQSINLGSQSQLPQVHGLPHPWHLTSRVQTCQNRQQS
AVNVMISQEDAQSKSADCQDKKSFVPKYQLWCPALRSSKTYSSTQGTQTTMPVLTTPIAK
RMQSVSKSSDVLHNVYVAQPCHQIVGNKTQSIVLPLGLQNIRPSQNQPSAPQLPQILITH
ELMHPSPSVASKGSLYNLHVVDTDTKTVPDMNKDRPPASAGLQVKHSLVSNTQNHFGETQ
IAPSLGSLHCTQKMAAVTLCPQQEPIASSKRMLSPANSLDIAMEKHQKRAKDEHGAACLT
DGRSVNYLNSNMAEVTRQRKLMLVRQVCATESADSPIETVAPPLQHEKPEDENNAQPPNN
RETMTPESAGQDEPSTVVAQLQPSFALTTSLGSHVSSVPANACLKPQDKSEEQKLPPAKC
PIRPWTFHGQVKLASSVSVVNTRDSHRLSFPSLKTTTTFTWCYLMKRKPLHVPQMDQKIS
AYSTWAVSPNNPHPLGLPTKVVMSLFNSKQNSKKIHYTEAITTSMKSDILAYSSKLKDVM
PKVLKHQKSLTTENNSKVKPETQVSSESDKDSSASKLEPRRVKIFDGGFKSNEEYVYVRG
RGRGKYICEECGIRCKKPSMLRKHIRTHSDVRPYHCTHCNFSFKTKGNLTKHMKSKAHSK
KCMEMGVEDQDTEDSGDRSQVGSTDRPDSDGEDSEGADDDNEDDNEEEEDDSQAESGLST
NPSVSASPQHIPSSLQAELPPSSLLAQLSIHHHPAALSHPQPPYSDCHTHDASDTESVPM
LSPVSLVKQMSISGGCSSPLPYSPPPHTSGTESVPMMSPVSPCRQMSIDYPDFDVPPCPP
AQGKSCSKLGQDGTLALSVSDPGVPVGTDVSTQTSSYSLQTSSYSPLHFPSQRPTQGPGA
TQGTNTHLFSHLPLHSQQPSHSPYSMVPVRGIQLVPASLAAYSTFVPIQAGPVQLTIPAL
SVIHRNTSPLPFPNTSNSPEPDGMVSPSSPVNQPLVVQEPISSIMPYFPLGQVAGLGQVT
GLGQVTGLGQVTGLGQVTGLGQVTGLGQVAGLPALRASHHTLQSMGLETLTLTSSEGLTS
TQLLSQHGLSLNATLGLQVLAHTSTSQSRTVPHHHTHIPGLQILNIAVPTLIPSLSPLSG
LSPLAGPFERQGSPDAPAAPPTPQPSSQTETEPSVSCLSAASPPPATLRGSLAQELASSC
SRSSRSGSGGSGGSRGSDDTQTSEKKERVTTSLEQPAPASAPSPAPSPAPALALAPAPAP
DRGLEGDKNPPAEGASEPVTPRRQSMLSRQQETENYNDDSASSDDEDRLVIAT
NT seq
8262 nt
NT seq
+upstream
nt +downstream
nt
atggccaatttccaacaatctccgatggcagctgtccattcagataaaatcgaagaagca
cagaaagaactgaaagatcccaaagccagtgcacagaaagggatcaatgagtgtggtcga
acaagtgcagataacataaagggactgaagaggaaaaaggttgtgacagagaaccagctg
aagaaaatacccaaatctcctgtgaagaagcccttgcagtccaagacctctgtggcaaca
ctccaaggtacctcatccaaggaggctgtgaactcctgctccaatcccgacagcccctct
cgaaaccctgccagctcaccaagccggaacagagatacggagtaccttcggcctgtggct
gaatcctctgagggagtgacatcatccattgacagtgataggctgaagcagagggaagtg
tcttcctcaaagccacagtctcttgatccggtcagtggtaaagaggggtctgcctctggt
gttggggaatctgagcagctcaaggaccgtaagagtggcgaaactggatgtgaaggtgac
gctacttaccacaccagcgctccacttgaggtcttgctcaaggctatggaatcagatttc
agctccctggcagaaagaaatacacgtgttccagtcacatctgttggaaaaccaattcaa
accctttctgcccagtttattagtgaattgaatgctatgccagctgtacattttggactc
caaactcagcctggccatatgcaaacttactttgtaaataaacaagagagctacaccacc
atgcaggcctctacccaggctactgccttgcagaattcacagcatgctacacagtatttc
agcaaccgggaaaagcctgttctacaaatgagcttcagtactgggccctccgctgcccgt
actcatacacctattccatctggctccaattccttacccaagagccagccaccggtggtc
cacacatgccagtccctatctgccagtgtccccagtaccattcaagtccctgttacacct
ggttacaacccagtccatatggccacagttgtaaactttggtcttgaacagatgtgtagc
atctccccaaagcaccagaagcctaagaagcaggggaagtatgtgtgtgaatactgcagt
cgggcatgtgcaaagcctagtgtgctcctcaagcacatcaggtcccacacaggagaacgt
ccctacccatgtgttacatgtggcttctcattcaagaccaagagcaatctgtacaagcat
aagaaatcccatgctcacgcaataaaactggggcttgtggcacgttccgactctggaagt
gggtccctctccgtggagtctgacaaagcacccggaacacattcagatgtagaggaaagc
ggggacagtgacgaggaaagtagcacagcggacctggaccctgactcgtcacaaggcagt
gttgcagcgttctctgagagcagtttgcagagtgcaggcacaacacaaggcaaccatggg
gatgcaggggacctatcggctgttttcgaaacgcttaaaccaacgacgagtcagaggagc
tacgagtccaaagggacagctggcctcccgaaagtagtcgtctatcctgttaatgtctcg
cctcagcgggcggacagtccaagagtcgcagactgtacccctgagcaggctactgcccaa
aagcaaagggactttcaaacggcacatctaagatccagcatcaccgtcctgtcgtccgtg
aaagaggtggattgcacaatccccctgcaggatgcaagaagtgaggatgaggatcaacag
tgtaggtccccaccaggaggcggacatggtcagcttcaaaggcagcaggccacagacttt
tctcagcagcagcagcagggcaagtgtctgcttagtccccgcagtttaggcagcacagac
tctgggtatttctcacgttctgaaagcgcagaccaggccatgagtcccccgagtcccttt
gtaaagctaaccccaccaacagacatggatgtcaccaaaaatgcacttcctaatctccct
gcagtggttgccactgttatgaatgtggcttccgtggagaagccacatgttgtgcaaggg
caaatgcgtccaccattagtaacaaaagcactctctcttgaagagcggatctcaaagtta
atatcagacaatgaggcagtggttgatgacaaacagctggacagtgtcaaaccaagaagg
acttctctttccaggagaggtagcatagactcccccaaatcttatatatttaaagactct
tttcagtttgaccttaaaccaatggcgagaaggtcaagttccagctcagacatacccaag
tccccattcacccctacagaaaactctaagccagtattgctattgtctgttcctaatcag
tatccaccgatggactgtttaccaataacaagaagtaattctatgcccacaactccaggg
cactcgggtctcccaccaaacgttacccaacaaccccacatactacggatctgccagtct
tttgatgaaaaaatgagttccttaaacgatgatgtgttttcatctgctccctctaaccca
aatccagcaatacattctcgtacccttgtacggcaagtagcagtggaacatttctccaca
agtgaggtccttacctcagtccgttccatggatgaaggttaccatggttctagcgtttcc
actgtgacaatgcaaaggagcaggtcttttgagcatgcacaagacccaaaccgaaagcct
cagcagagcaaaggcacaatgtatgagtgtgagacctgtcgtaaccggtaccgaaaacta
gaaaactttgaaaatcacaagaaattctattgttcagaacttcatggtccgaaaaacaag
ctgatgtctgtcagagagactgagctggatgtttttcagcgtggcatgcagcagccatta
gtccccagaacaacaggtatttctggcataatggaccaacagcaatcaattagaaaaaga
aggaaaatgaagagtgttggtgacgatgatgaccaatcaccaactgacaccaatccccca
tgctctgttagttttgattcttgccaactatcaacagccagttcaggtcggacattttct
cagcaatctatcatggttgatctactccctaaaagcaacccaccgcaaatacctcaaata
cagctaatagcaggagttacagatgcaacagaatcaagactgtcaccgatcagagaaacc
caggttaacacctctggtaaagaaagaggcgacctacagaggcaaggcagcggtacatca
gttatcagacataccaactctctaagcaggcccaattcatttgagatctctgaatctatt
gacagagcctctccagttgatttcctggacaaagatggccatagcacaggaaaaacaaag
gcagatgctacagccaatctttcattagagagctatcatgaaaagatgtccatacctaaa
tgtgccaaccagggagtgatggaaaaccgtgttgaccacacattagcagcagtggctgag
agctgcgctgctgtccagcagtctcgcctggttcgccaaaacaacattcctgaaatcctg
gtcacagaggaacctgatcgggagcatgacggtcatagcactgagcaaggggagaaggct
gcagatacattcaactggccccagaggagcgagagcctgtccaagctacccacagagaag
cttccacccaagaagaagagaatccgtctggctcagatggagcactcctctggagaatcc
agcgtcgagtcctcattgtctcgaagcctcagcagggacagtagcctgtcaagatgttcc
agcgtatcagcctccttcgactgggacgagccattcaggtccgagagcccctccagagga
gaatgtgccaacaaaatctgtgatcttcaagggctaccaatagccttcaacaccctaggg
gtccctggcatgatgagacgtgctgcctcagaacagatcagttgcactcaaccctcagtg
gagatatcttgcgactatcgcagcaagtccttcgactgtggcagtgggtctcccagcagg
tctctgccacccaacaggtcaatgtcaccaatggaactgcgaaagagtgctcaaacctcc
tcgtctccgcatgtacctctcattgaaaggcgaagggggccactggttcgccagatgtct
ttaaagattgggccggagagtcagcaacatgtcgggaatcatgccatcgctgtccagagg
ctccccactgtaatctctatatctcagcagaggcctcaacagatgcaacagactgccaac
aatcctcccattgcccaaccttttattttgcattctggagaaactctcctgcagcacaat
gaaaaaatggtgcaaagcattaacctgggcagccaaagtcaactgcctcaagttcatggt
cttccgcacccttggcacctaacatcgagggttcagacatgccaaaatcggcagcaatct
gcagttaatgtcatgatcagccaagaagatgctcagagcaagtctgctgactgtcaagac
aagaaaagctttgtacccaagtaccaactgtggtgtcctgctctgagatcaagcaaaaca
tactcttccacacagggtactcagacaaccatgcccgtcttaacaacacccattgccaag
cggatgcaaagtgtgtcaaagtcttcagatgttctccacaatgtctatgtggcacaaccg
tgtcatcagattgtagggaataagacacagtcgatagtattgcctttaggcctacaaaac
atccgaccttctcaaaaccagccaagtgctccccaattgccacagatcctgataacccat
gagctgatgcacccttccccctctgtggccagtaaaggcagcctctacaaccttcatgtt
gtagatacggacacaaagactgtaccagatatgaacaaggacaggcctccagcatctgct
ggccttcaagtaaaacacagtttagtttccaatacccagaaccattttggtgaaactcaa
atagctccctccctgggctccttacactgcacccagaaaatggcagctgtgaccctctgt
ccacaacaggagcccattgcctcaagcaagagaatgctctcccctgccaatagcttggac
atcgccatggaaaaacatcagaagcgagcaaaggatgaacatggtgcggcatgcctcact
gacggcaggtccgtcaactacctgaactccaacatggcagaggtgactaggcaacggaag
ctaatgctagtccggcaggtgtgtgccactgaatcagcagacagtcccatcgaaactgtg
gctcctccactgcaacacgagaaaccagaggatgaaaataatgcccagcctcctaataac
cgcgagactatgacaccagaaagcgccggacaggatgaaccatctactgtagttgctcaa
ttacagccaagctttgcattaaccacctctctaggaagtcacgtctcctccgtgccagcg
aacgcctgcctgaagcctcaagacaagagcgaggaacagaaattgccccctgccaagtgt
cccattagaccctggactttccatggacaggtgaaactggcctcatctgtatctgtggtc
aacacacgagacagccaccgcctgtctttccccagcctgaaaacgaccaccaccttcacc
tggtgttacctgatgaagaggaagcctctgcatgttccccagatggaccagaagatctcg
gcctactccacctgggcagtgagccccaacaacccccacccactgggtctgcccaccaag
gtggtgatgtctctcttcaactccaagcagaattcaaagaaaatacactacacagaggcc
ataacgacaagtatgaaatcagacatcttggcctattcaagcaagctgaaagacgtcatg
ccgaaggtcctaaagcatcagaagtctctaacaactgagaataacagcaaagtgaaacct
gagactcaggtgagcagtgaatcagacaaggattcttccgcatccaaactagagccgcgg
agagtcaagatatttgatggaggattcaaatctaacgaagagtatgtgtacgtgcgtggg
cgtggtcgaggtaaatacatctgtgaggagtgtgggatccgctgcaagaagcccagcatg
ctccgtaaacacatccgcacccactctgacgtacggccctatcactgcacccactgcaac
ttctccttcaagactaaagggaatctgaccaagcatatgaagtccaaggcacacagtaag
aagtgtatggagatgggtgtggaggaccaggatacagaagactctggagaccgtagccag
gtgggcagtacagaccgcccagattcagacggagaggactccgaaggtgctgatgatgac
aacgaagatgataatgaggaagaggaggatgacagccaggctgagtcgggcctgtccacc
aacccctcggtctcagccagcccccagcacatcccctcctccctccaggctgagctccct
cccagctcccttctggcccagttgtccatccaccaccacccagctgccctgtcacacccc
cagcccccttactccgactgccacacccacgatgcctcagatacagaatccgtgcccatg
ctgagccccgtctccctggtcaaacagatgtcaatctccggaggctgctccagccccttg
ccctactccccgcccccccacacatctggcacagagtcggtgcccatgatgagccctgtc
tcgccgtgcaggcagatgtccatcgattaccctgactttgacgtgcccccttgtcccccc
gcacagggcaagagctgctccaagctcggccaggatggcactttggccctgtcagtgagt
gacccaggtgtccctgtcgggacagatgtcagcactcagacctcctcctatagcctccag
acatcctcctacagccccttgcactttccttcccagcgcccgacccaaggaccaggggcc
acacaggggaccaacacccacctcttcagccacttgcctctgcactcccagcagccctca
cactccccctacagcatggtccccgtgaggggcatccagctggttcccgctagcctggca
gcctattccaccttcgtgcccatccaggctggccctgtccagctcaccatccccgccttg
agcgtcatccaccggaacaccagccccctcccattccccaacacctctaactcccctgag
cccgatggtatggttagtccctcatcccccgtcaaccagcctctggtggtccaggagcca
atcagtagtatcatgccctacttcccccttgggcaggtggctgggctggggcaggtgact
gggctggggcaggtgactgggctggggcaggtgactgggctgggacaggtgactgggctg
gggcaggtgactgggctggggcaggtggctggtctaccggccctcagggcctcccaccac
acgctgcagtccatgggtctggagactctgaccctgaccagctcagaaggcctgacctcc
acccagctgctatcccaacatggcctgtcgctcaatgccaccttgggcctgcaggtcctg
gctcacacctccacctcccagagcaggacagtcccccaccaccacacccacatccctggc
ctgcagatcctcaacatcgccgttcccaccctcatcccctccctcagccccctctccggc
ctcagtcccctcgccggaccctttgagaggcagggcagccccgatgccccagcagcccca
ccgaccccacagccctcctctcagactgaaaccgaaccctcagtcagctgtctgtctgct
gcttcccctccccccgccaccctgaggggaagtctcgcccaggaattggcatcatcatgc
agcagatccagcagatcaggatcggggggttccggaggttccagaggctccgatgacaca
cagacttcagaaaagaaagagagggtaacaacatcgctagaacagcccgctccagcctca
gctccatccccagctccatccccagctccagctctagctctagctccagccccagcccct
gacaggggcctggagggggataagaatcctccagcagaaggagccagtgagcctgtcacg
cctcggaggcagtcgatgctctcacgacagcaggaaacggaaaactacaatgatgactca
gcatccagcgatgatgaggacagactggtcatcgccacctga
DBGET
integrated database retrieval system
