Oncorhynchus mykiss (rainbow trout): 110496867
Help
Entry
110496867 CDS
T07259
Name
(RefSeq) DNA-binding protein SATB1
KO
K23225
DNA-binding protein SATB1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110496867
03036 Chromosome and associated proteins [BR:
omy03036
]
110496867
Transcription factors [BR:
omy03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
110496867
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
110496867
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ULD
CUTL
CUT
MAP6
Motif
Other DBs
NCBI-GeneID:
110496867
NCBI-ProteinID:
XP_036809242
LinkDB
All DBs
Position
18:complement(57996927..58019631)
Genome browser
AA seq
1060 aa
AA seq
DB search
MSVYHSVPHVMDPQQCDGGHVSEGCNTPGNGDHRPPPAKLVRLELNGGGGLSGPHQGRTR
QGSPGVRTSAPKLTTPVPQPKNWHKRGSLLPVLCLVEHRESPVPAVEPERREEHAEFVLV
RRDLLFNQLIEMALLALGYSHSSAAQAKGSIQVGRWNPVPLSCVTDAPDATVADMLQDLY
HVTTLKIQLTSCPMLEDLPPEQWSHSTVRNALKELLRDMNQSSLAKECPLSQSMISSIVN
STYYANVSASKCHEFGHWYKHFMNTKGIMEIDSFSDQSQTSSTHPSTKQSFPGSTAEQVC
SSPLPFPHGGATHTSGRSCLAPSLCPPGLVTAPLSPQLVSPQQIVMAQFLNQQYAVSHML
AQQSLSVSVSTSPQQFLNHPPVGRPPPSLALAKGLDPPPQGGPPGPGSGSQSQVCGPSDI
SCEIYQWVREELKRAGISQAVFARVAFNRTQGLLSEILRKEEDPKSASQSLLVNLRSMQS
FLQIPEGDRDRIYQEERERSLTTSTIINHSPNNTTTPRHTQTRKEEGDFVKAEDWPSQVS
IVFPKVRLSPVAVVNRGVKSEGCVLDRGVKSEGCVLDRGVKSEGCVLDRGVKNVGCVLDR
GVKSEGCVLDRGVKNVGCLLDRGVKSEGCVLDRGVKNVGCVLDRGVKNVGCVLDRGVKNE
GCVLDRGVKNEGCVLDRGVKNVGCVLDRGVKNVGCVLDRGVKNVGCVLDRGVKNVGCVLD
VNSSIYEEIQQEMKRAKVSQAMFAKMAASKSQGWLCELLRWKEDPSPENRTLWENLCMIR
RFLSLAQMERDAIYEQESNTLQQHCTDRLTQLVNNNTLLQRHSPLQQQHHQRTLTALSQL
PLQPQAEPRLPPRQPSTASPAETEGRRGQLRTWWGSSQGDGREEDITGRGSRGWGQGRVR
GVCNNDKEGGEGRWAGGRQTNGEGDGGSDGEGFRVSREAQGILQSFIQDVGLNPDEEAVH
TLSAQLGLPKHTILSFFHSQHHSYTHQNHRQHYSEIQHNQHPSQDDNHRENHNQHHTDQD
QLFYNGAGPTQPKRTTGEEWTVDLTGQMGGEGRIWSGKRK
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtgtatcactcagtcccacatgtgatggacccccagcagtgtgatggaggccat
gtgtcagaggggtgtaacactcctggtaatggggaccaccggccccctcctgccaaactg
gtccgcctggagttgaacggtgggggggggctctcaggtccacaccagggcaggacgaga
caggggagcccaggggtcagaacttcggcccccaaactcaccacacccgtaccacaaccc
aagaactggcataaaagaggaagcctgctgcctgtgctgtgtttggtggagcacagagag
agcccggtcccagcagtggagcctgagaggagagaggagcatgcagagtttgtactggtc
aggagagacctgctgtttaaccagctgatagagatggctttactggccctgggctactct
cacagctcagcagcacaggccaaaggttcgatccaggtgggtaggtggaaccctgtccct
ctgtcctgtgtgactgatgctcctgatgccacagtggctgacatgctacaggacctctac
catgtgaccaccctcaagatccagctcaccagttgtcccatgttggaggacctccctcca
gaacagtggagtcactccacagtgagaaacgccctgaaggagctattgagagacatgaac
cagagctcactggccaaagagtgccctctgtcccagagtatgatctcctccattgttaac
agcacctactatgcaaatgtgtcggcctccaagtgccacgagtttggccattggtataag
cacttcatgaataccaaaggcatcatggagattgacagcttctctgaccaatcccaaacg
agctccacacacccatcaaccaaacaatcattcccaggcagcacagccgagcaggtctgc
tcctcacccctcccctttcctcacgggggtgccacccacacttctgggcgtagttgtctg
gccccaagtctctgccccccggggctggtgaccgcccccctcagcccccagctagtcagc
ccccaacagatagtcatggcccagttcctcaaccagcagtatgcagtcagccatatgcta
gcccagcaaagcctgtctgtatctgtttccacctccccccagcagttcctcaaccacccc
cctgtggggaggcctcccccctccctggccctagccaagggcctcgaccccccgccccag
ggtggaccaccaggacctgggtctgggtcccagagccaggtgtgtggaccatcagacatc
tcatgtgagatctaccagtgggtgagagaggagctgaagagagcaggcatctcccaggct
gtgttcgcccgtgtggccttcaacaggacccagggcctgctgtctgagatcctgcgtaag
gaggaggatcctaagagtgcgtctcagtctctcctggtcaacctgcggtccatgcagagt
ttcctacagataccggaaggtgaccgcgaccgtatctaccaggaggagagagagaggagt
ctgaccacgtcgaccattatcaaccattcacccaacaacactaccacaccacgccacaca
cagaccagaaaggaagagggagactttgttaaggctgaagattggccctcccaggtttcc
attgtatttcctaaagtgaggctgtctccagtagcagtagtaaacagaggggtgaagagc
gagggatgtgttctagacagaggggtgaagagcgagggatgtgttctagacagaggggtg
aagagcgagggatgtgttctagacagaggagtgaagaacgtgggatgtgttctagacaga
ggggtgaagagcgagggatgtgttctagacagaggggtgaagaacgtgggatgtcttcta
gacagaggggtgaagagcgagggatgtgttctagacagaggggtgaagaacgtgggatgt
gttctagacagaggggtgaagaacgtgggatgtgttctagacagaggggtgaagaacgag
ggatgtgttctagacagaggggtgaagaacgagggatgtgttctagacagaggggtgaag
aacgtgggatgtgttctagacagaggggtaaagaacgtgggatgtgttctagacagaggg
gtgaagaacgtgggatgtgttctagacagaggggtgaagaacgtgggatgtgttctagac
gtcaacagttctatctatgaggagatccaacaggagatgaagagagccaaggtttctcag
gccatgtttgccaagatggccgcgtccaagagtcagggctggctgtgtgagctgctgcgc
tggaaggaggatccgtccccggagaaccgaaccctgtgggagaacctgtgtatgatccgg
cgcttcctgagtctggcccagatggaacgagatgccatctatgaacaggagagcaacact
ctgcaacaacactgtacagacagactcacacagctagtcaacaacaacacactgctccaa
cgccactccccattgcaacaacaacaccatcaacgaacactgaccgctctgtcccagctg
cccttgcagccccaggcggagcctcgcctgccgccacgacaaccatccacagcatcaccg
gccgagactgaggggcgtagggggcaactgaggacctggtggggaagtagtcagggtgat
gggagggaagaggatattactggcaggggcagtaggggttggggccagggcagggttagg
ggtgtgtgtaacaatgacaaggaagggggagagggacggtgggcggggggcagacagact
aacggcgagggcgatggtgggagtgatggcgaggggtttcgggtgtcccgagaggcacag
gggatcctgcagagcttcatccaggacgttggtctgaacccagacgaggaggctgtccac
acactgtcagcccagctgggcctgcccaaacacaccatcctcagcttcttccacagccag
caccacagctacactcaccagaaccatagacagcactacagtgagatccaacacaaccaa
catccgagccaggacgacaaccacagagagaatcacaaccaacaccacacggaccaggac
cagctcttctataatggagcaggcccaacccagcctaagagaactacaggggaggagtgg
accgtagatctcactggacaaatggggggggaggggaggatatggagcgggaagaggaaa
tag
DBGET
integrated database retrieval system