Oncorhynchus mykiss (rainbow trout): 110496871
Help
Entry
110496871 CDS
T07259
Name
(RefSeq) ELKS/Rab6-interacting/CAST family member 1 isoform X1
KO
K16072
ELKS/RAB6-interacting/CAST family member 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
110496871
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110496871
Membrane trafficking [BR:
omy04131
]
Exocytosis
Others
Others
110496871
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
110496871
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cast
Rod_CreS
RBD-FIP
CCDC39
CCDC18_1st
AAA_13
DUF5798
Motif
Other DBs
NCBI-GeneID:
110496871
NCBI-ProteinID:
XP_021428563
Ensembl:
ENSOMYG00000000695
LinkDB
All DBs
Position
2:78233903..78266800
Genome browser
AA seq
1113 aa
AA seq
DB search
MYGSSRSVGRADANHSGGRDGGSSQGSGRSPHLPRSPRMGHRRTNSTGGSGGGPGGAGGK
TLSMENIQSLNAAYATSGPMYLSDNEVAMSDHVNKSGREMTTMGRQRVTYGSRASAGGGG
GVAASTPNIATSAQANAVLPGGMMAGDALAFGDHHMASTVPHSLRQARDNTILDLQAQLK
EVLRENELLRREVEVKESKLSSSMNSIKTFWSPELKKERALRKDEVSKITVWKEQYRVVQ
DETQHLHMTVQALQDELRIQRDLNQLLQQDPASQGRDLALTSEPTEENYRRLHGDHERQA
KELFLLRKTLEEMELRIDTQKQTLGARDESIKKLLEMLQSKGPSAKSSEEDQERTRRLAD
AEMHRHHLESLLDQRDRETTALREELHRRYEGTPESTKTKALQTVIDMKDAKINSLERGL
RDMEEEVIMLKSNGLLSCEERQEEMKQMEVYRSHTKFMKNKMDQVKQDLSRKDTELLGLQ
TKLDTLTNQFSDSKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKETTLNKKSKQIQ
EMSEEKGTLNGEIHDLKDMLEVKERKVNVLQKKIENLQEQLRDKEKQMSSLKERVKSLQA
DTSNTDTALTTLEESLAEKERIIERLKEQRDRDDREKTEEIDSNKKELKDLKEKVSLLQG
DLSDRETNLLDLKEHASSLASSGLKKDSKLKTMEISLEQRKEACLKLENQLKRAQNATLE
AKANTELSERITSLEREVSRHREDSGKAQAEVDRLLEILREMENEKNDKDRKINELESQS
SRQTKDQSKKVASLRQKEHVEKSRNAQLVDEAKKREDNISESSQQVKDSLRLKTERIEEL
EEALRESVQITAEREMVLAQEEAARNHQEKQIEELLGAMEKVKQELESMRAKLSSTQQSL
CEKEAHLTTLRAERRKHLEEVLEMKQEALLAAISEKDANIALLELSSSKKKKTQDEVALL
KREKDRLVQQLKQQTQNRMKLMADNYGDDHLKTAPDQTNHKPSPDQMIPPLLSLSENRSK
LKLYIDHLTDLCHDRDPSILSDLTPPAHYHHANPAAWEEELHKLTLEQLELELELCEKES
GELQEYANSVLQQIADYCPDILEQVVNALEESC
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atgtacggcagctcccgttccgtgggcagagcggatgccaaccacagcggagggagagat
ggggggagcagccagggttcgggtcgctcccctcatctcccccgttccccacggatgggc
caccgtcgcaccaacagcacggggggcagtggagggggtccaggcggagcggggggtaag
accctctccatggagaacatccagtccctcaatgccgcctatgccacctcaggacccatg
tacctgagcgacaacgaggttgccatgtccgaccacgttaacaagagtggtcgagagatg
accacaatgggtcgacagagggtgacctacgggtcaagagcaagcgcaggagggggtgga
ggggtggcagctagcactcccaacatcgccacatctgcccaggccaacgctgtgctccct
gggggaatgatggcaggtgacgccctggcttttggggatcaccacatggcctccacggtc
cctcactccctgagacaggcccgggacaacaccatactggacctgcaggcccaactcaaa
gaggttctgcgtgagaacgagttgctgcgtcgtgaggtggaggttaaggagagcaagctg
agttcctccatgaactccatcaagactttctggagccctgagctgaagaaggagagagcc
ctaaggaaggacgaggtgtccaagatcactgtctggaaggaacagtaccgcgtggtgcag
gatgagacccagcacctccatatgacggtccaggccttgcaggatgaactgaggatacag
agagacctgaaccagctgcttcagcaggaccctgccagccaaggtcgtgacctggccctg
acctctgaacccacggaggagaactaccgtcggctgcacggggaccacgagcgtcaggcc
aaggagctgttcctgctcagaaagaccctggaggagatggagctgaggatagacacccag
aaacagaccctgggcgccagggatgagtccatcaagaaactactggagatgctgcaaagc
aaagggccgtcggctaagtcgtcagaggaagaccaggagagaaccaggagactggctgat
gctgagatgcacagacaccatctagagtccctactggaccagagagacagggagacgact
gctctacgagaggagctgcaccgtcgatacgagggaaccccagagtccacaaaaaccaag
gctctacagactgtcatcgacatgaaggatgctaagatcaactctctggagcgaggtctg
agggacatggaggaggaggtgattatgttgaagtccaatgggctgctgagctgtgaggag
agacaagaggagatgaaacagatggaagtctaccgcagccacaccaagtttatgaagaac
aagatggaccaggtgaagcaggacttgtccaggaaggacacagagttgctgggtttgcag
accaagctggacactttgaccaaccagttctctgatagcaagcagcacatcgaggtcctc
aaggagtcgctgactgctaaagaacaacgagctgccatcctacagacagaggtggatgct
ttgcgtctgcgtctggaggagaaggagaccacactgaacaagaagagtaaacagatccag
gagatgtctgaggagaagggcacgctcaatggagagatccacgacctcaaggacatgctg
gaggtcaaggagcgcaaggtcaacgtcctgcagaagaagattgagaacctgcaggagcag
ctgagagacaaggagaagcaaatgagcagcctgaaggagagggtcaaatctctacaggca
gacacctctaacacagacactgctctcaccaccctggaggagtcccttgctgaaaaggag
cgtatcatcgagcgtctgaaggagcagagagacagagacgacagggagaagactgaggag
atcgacagcaacaagaaagagctgaaggatctgaaggagaaagtcagtctgctgcaggga
gatctgtctgacagagagactaacctgttggacctgaaggagcatgcgtcatccctggct
tcctcggggctgaaaaaagactccaagctgaagactatggagatctctctggagcagagg
aaggaggcgtgtctcaaactggagaaccagctcaagagggcccagaatgcgacgttggag
gccaaagcgaacacagagctgtcggagcgcatcacctccctggagagggaagttagccga
caccgagaggattctgggaaggctcaggcggaggtggaccgactgctggagatcctgaga
gagatggagaatgagaagaatgacaaggaccgaaagatcaatgagctggagagtcagtcc
tccagacagactaaggaccagagtaagaaggtggcatcactgagacaaaaggagcatgtg
gagaagagtaggaacgcccaacttgtggacgaagccaaaaagagagaggacaacatctcc
gagagctctcaacaggtcaaggactccctacggttgaagacggagcgtatcgaggagtta
gaggaggctctgcgagagagtgttcagataacagcggagagagagatggtgctggcacag
gaggaggctgccaggaaccaccaggaaaaacagattgaggagctgctgggcgccatggag
aaggtgaaacaggagctggagtccatgagggccaagctgtcgtctacccagcagtccctg
tgtgagaaagaggcccatctgaccacgctgagggctgaacgcaggaaacacctggaggag
gtgctggagatgaaacaggaggcgctgctggcagccatcagtgagaaggatgccaacatc
gccctgctggagctgtcatcgtccaagaagaagaagacgcaggatgaggtggctctgctg
aagagagagaaggaccgtctggtacaacagctcaaacagcagactcagaaccgtatgaag
ctaatggcagacaactatggggacgaccacctgaagaccgcccccgaccagaccaatcac
aaaccttctccagatcagatgatcccccctctcctgtccctgagtgaaaatcgcagtaag
ctgaagctctacatcgaccacctgactgacctctgccacgaccgagaccccagcatcctc
agtgacctgaccccgcccgcccactatcaccacgccaacccagcagcctgggaggaggag
ctacacaagttgactctggagcagttggaactggagttggagttgtgtgagaaggagagt
ggggagctacaggagtatgccaattcagtgctgcagcagatcgctgactactgccctgac
atcctggagcaggtggtcaacgcgctggaggagtcctgctga
DBGET
integrated database retrieval system
