KEGG   Oncorhynchus mykiss (rainbow trout): 110496967
Entry
110496967         CDS       T07259                                 
Name
(RefSeq) protocadherin-20
  KO
K16498  protocadherin delta 1
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy03273  Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:omy00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03273 Virion - Lassa virus and SFTS virus
    110496967
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:omy01009]
    110496967
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:omy04515]
    110496967
Protein phosphatases and associated proteins [BR:omy01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     110496967
Cell adhesion molecules [BR:omy04515]
 Cadherins
  Protocadherins
   110496967
SSDB
Motif
Pfam: Cadherin Cadherin_FAT4_N Cadherin_CELSR2_9th Cadherin_2 Adeno_E3_CR2
Other DBs
NCBI-GeneID: 110496967
NCBI-ProteinID: XP_036828981
LinkDB
Position
Unknown
AA seq 894 aa
MFNKTGPGLSSRGVLWGLCILLLYTSPLCCFANFSQAKELVYKIKEGLPSGTLIGSVGSD
LHLDLSLDPHVLFNLPQKKPSDQYVTLNSTTGQLFTSGNEIDRETLCPDSSEYKQGCVLS
LDVFVLPQQYFQLVKVKILVEDVNDNRPRFPTGEIRVSVPENTQVNARFAVEQSATDPDL
GFHGVQTYWLVNDFGVFTLDVEENEGGELTPFLIVTDELDRERQEEYVTDIIAEDGGLPP
LLGTATLRIIITDVNDNCPQFTESQVNVTLYGNTTKGEHLSRLHAFDPDQGANAVISYAY
SDRVPREARALFHLDRITGVIKLAGQINTATGKFYKLTVLANGPGCVPAVATVTVHVIRV
ASGPPVITPRYIAAEKDGVVTMKESEPPFSPIAFFTVKNTDQRGQGTECLLEGSGPFRLT
PYKRLKNEYLLETTEPLDYEQRQDYELTVVLRNPRGLVIKSFVKILVLDENDNAPVFKQS
LYEVSVEENNPPNSFLTQLQATDQDSEARGEVIYTLGSDAPSIFLLERLTGVLTVSTSLD
REEKQTYRFMVRAVDRGTPRRESIATVVITVLDRNDNSPRFINKDFTFFVPENFPGFGEI
GVLSVTDADAGENGWVALSIVNGSDIFVIDAGRGALRARTPLDREQQGTYYLWIEAVDGG
EPSLSCLTVVTVLLLDVNDNPPVVLFPQSNQSYMLVLPSTLPGTSITEVYAVDKDTGMNA
VIAYSIIKRKGGEPGSFDIDPDTGNITLKRELSDRGLYSLLVKVSDHGQPEPLHSTVLVN
LFVNETVSNESYIQSLLTGEEVEIQMEEKQWYVGKLTERPGREDLFPCQPLIIALSVTCL
GLFCIVVTLTAYICCRKLKKWRKRQMKRLEVEMPLKVNGDVRDADRKRTEISNI
NT seq 2685 nt   +upstreamnt  +downstreamnt
atgttcaacaaaacaggacccggacttagctcgagaggagtactgtggggtttgtgtata
ctcctcctttacaccagccccctctgctgttttgctaatttcagccaagcgaaagagctg
gtctataagataaaagaaggattaccgtcggggacactcatcggatccgtgggctccgac
ttacacttggatttatccctcgatccccatgttttattcaatctgccccagaagaagccc
agtgatcagtatgtcactctgaacagcactacgggacagctgtttacgtctgggaatgag
atcgacagggagacgctctgccccgactcctcggagtacaagcagggctgcgtcctctcc
ctggatgtgttcgttctacctcagcagtatttccagctggttaaggtcaaaatcttggtc
gaggacgttaacgataatcgtccgcgcttcccgacgggcgagattagggtttcggtcccg
gagaacacccaggtcaacgcgaggttcgcggtggagcagtcagcgacggaccccgatctg
gggtttcacggggtccagacttactggctggtcaacgactttggggtgttcactctggac
gtagaggagaacgaggggggtgagctgacacccttcctcatcgtgaccgacgagctggac
cgggaacgacaggaggaatacgtaacggatattatagcagaggacggtgggttaccacct
ctccttggcaccgccacgttgaggattataatcactgatgtcaacgataactgtcctcag
ttcacagagtcacaggtcaacgtgacgctctacgggaatacgactaaaggagagcacctg
tccaggttacacgccttcgaccccgaccagggcgccaacgccgtgatcagctatgcgtac
agtgaccgcgttccccgggaggctagagccctgttccatctggaccggattaccggggtg
atcaaactggccggtcagatcaacaccgcaaccgggaagttctacaaactcactgtcctc
gccaacgggcccggttgcgtccctgccgtcgccacggtgacggtgcacgtgatccgggta
gcttccggtccgcctgttattacgccgcgctacatcgcggcggagaaagacggcgtggtc
acgatgaaggagtccgaaccgccgttttccccaatcgcgtttttcaccgtgaagaacacg
gaccagagaggacaggggacggaatgtctacttgaaggatccggcccgttccgactgaca
ccttacaaacggttgaagaacgagtatctgttagagacgacggagccgctggactacgag
cagaggcaggactacgagctgaccgtagtgctcaggaaccccagaggtctcgtcattaag
agctttgttaagatcctggttctggatgagaacgacaacgcgccggtcttcaaacagtct
ctgtatgaggtctccgtggaggagaataaccctcccaacagcttcctgacccagctccag
gccacagaccaggacagtgaggccagaggagaggtcatctacacgctggggtcagacgct
ccctccattttcctcctggagaggctgaccggcgtgctgaccgtgtccacgtctctggac
cgagaagagaagcagacctacaggttcatggttcgggcggtggaccgagggacccccagg
agagagtctatagctacagtggtcatcactgtgctggaccgcaatgacaacagcccgcgc
ttcatcaataaagacttcacgttctttgtgccggagaatttcccgggttttggcgagatc
ggcgtcctctcggtaacagacgcggacgcaggcgagaacggctgggtggccctctccatc
gtcaacggcagcgacatcttcgtgatcgacgcggggcgcggcgctctcagggcccgtacc
cctctggaccgggagcaacagggaacgtactacctctggatcgaggcagtcgacggaggg
gaaccctctctctcctgcctcaccgtggttaccgtcctcctccttgacgtaaacgacaac
cctcccgtcgtcttgttcccccagtctaaccagtcctacatgctggtgttgcctagcacc
ctaccagggacctccatcacagaggtttacgccgtggataaagacacgggaatgaacgcc
gttatcgcctacagcatcatcaagaggaagggtggcgagccggggtcgtttgatatcgac
ccggacacagggaacatcacgttgaagagagaactgagtgaccgcggtctctatagtcta
ctggttaaagtctcggaccacggtcaacccgaacctctccactccacggtcctggtcaac
ctcttcgtcaacgagacggtttctaacgagagctacatccagagtcttctcaccggggag
gaggttgagatccagatggaggagaagcagtggtacgtgggtaaactgacagagaggccc
ggcagggaggacttgttcccctgtcagcctctaatcatagctctgtcagtgacctgcctg
ggactgttctgcatcgtcgtcacgttgactgcttatatatgctgcaggaaactgaagaaa
tggaggaaacgtcaaatgaaaagactagaggttgaaatgcctttgaaggtgaacggtgac
gtgcgcgacgcagatagaaagcggacggaaatctcaaacatttga

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