Oncorhynchus mykiss (rainbow trout): 110497019
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Entry
110497019 CDS
T07259
Name
(RefSeq) ubiquitin-protein ligase E3A isoform X1
KO
K10587
ubiquitin-protein ligase E3 A [EC:
2.3.2.26
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110497019
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110497019
Enzymes [BR:
omy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
110497019
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
HECT type E3
110497019
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
AZUL
Motif
Other DBs
NCBI-GeneID:
110497019
NCBI-ProteinID:
XP_036807210
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All DBs
Position
18:12600823..12610380
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AA seq
871 aa
AA seq
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MNSDERDCECALPQAETSPAGGYDRIQEESDIENTEASRMKRAAAKHLIERYYHQLTEGC
GNDSCSNAWCSSSRGSHCLDNNAAAVKALELYKNNAKLCDPHPSKKGTTMNHCVRDDFKD
VNYLTEDKVYEILHICGEKEDYSPLIRVIGRVFSSAEGLVQSFRRSKPPTKEELKSLQSK
DEDKDEDEEEAAACSAAAMEEDSPGSSSRLDGAASGDNDVGKLGPDEVSVDIDAVRRVYQ
RLLSNGNIETAFLNALVYLSPNVECDLTYHNVYSRDPNYLNLFVVVMENSNLHSPDYLEI
ALPQFCRAMSKLPLPALAKLARLWSHYSAEQIHRIMETFQQLITYKVVSNEFNSRNLVND
DDAVVAATKCLKIVYYANVMGGEVDTEHNEEEDEEPIPESSELTLQELLGEERRNKKGPR
VDPLETELTIRTSDSRRPLIPFEEFVNEPLNEVLEMDKDYTFFKVETENKFSFMTCPFIL
NAVTKNLGLYYDNRIRMYSERRITVLYSLVQGQQLNPYLRLKVRRDHIIDDALVRLEMIA
MENPADLKKQLYVEFEGEQGVDEGGVSKEFFQLVVEEIFNPDIGMFAYDERTKMFWFNPS
SFENEGQFTLIGIVLGLAIYNNCILDVHFPMVVYRKLMGKKGTFRDLADSNPVLYQSLKE
LSEYEGSVEEDMMITFQISQTDLFGNPLMYDLRENGDQIPVTNENRKEFVAQYAEYMLNK
SVEKQFKAFRRGFHMVTNESPLKYLFRPEEIELLICGSRNLDFQALEETTEYDGGYSRDS
RIIKEFWETLHSFAEEQKRLFLQFTTGTDRAPVGGLGKLKMIIAKNGPDTDRLPTSHTCF
NVLLLPEYDTKEKLRERLLKAILYAKGFGML
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgaattccgacgagagggattgtgagtgtgcgctaccacaggccgagacatcccctgca
ggaggatacgacagaatacaagaggagtctgacatagaaaacacggaagcaagccgaatg
aagcgagcagccgccaagcatctaatagagcgctactaccaccagttaacggagggctgt
gggaatgactcctgctcgaacgcgtggtgctcctcgtccaggggctcccactgcttggac
aacaacgcagccgccgtcaaggccctggagctgtacaagaacaatgccaaactgtgcgac
ccacacccctccaagaaaggcaccactatgaaccattgtgtaagggacgacttcaaagat
gtgaattacctaacagaggataaagtctatgagatcctacacatctgtggagagaaggag
gactactcccctctgatccgggtcataggacgggtgttctccagtgcagagggcctggtg
cagagcttccgccggtccaaaccacccaccaaggaggagctcaagtccctccagagcaag
gacgaggacaaagacgaggacgaggaggaagcggccgcctgctccgctgctgctatggag
gaggactcgcccggttcctcttcccggttagacggcgctgcatcaggggacaatgatgtg
gggaagctgggtcctgatgaggtttctgtggacatcgacgctgtcaggagggtctaccag
agactgctgtccaacggtaatatcgaaactgccttcctcaacgcactggtctacctgtcg
cccaacgtggaatgtgacctgacgtaccacaacgtctactcccgggaccccaactacctg
aacttgtttgtggtggtgatggagaacagtaacctccacagcccagactacctggagatc
gctctgccccagttctgcagggccatgagcaagctgcccctacccgcgctggccaagctg
gcccgcctgtggtctcactacagtgctgagcagatccaccgcataatggagaccttccag
cagctcatcacctacaaggtggtcagcaatgagttcaacagccgcaacctggtgaacgac
gacgatgcagtggtggcagccaccaagtgcttgaagatagtctactatgcaaatgtcatg
ggaggggaggtggacacggagcacaacgaagaggaggacgaggagcccatccctgagtcc
agcgagttgacgctgcaggagctgctgggggaggagaggagaaacaagaagggcccccgg
gtggaccccctggagactgagcttaccatccggacttccgacagccggcggcccctcatc
ccctttgaggagtttgtcaacgagcccctgaatgaagtcctagagatggacaaggactac
acgttctttaaagtggagacggagaacaagttctccttcatgacgtgtccgttcatcctc
aacgccgtgaccaagaacctgggcctgtactacgacaaccgcatccgcatgtacagcgag
cgacgcatcacagtactctacagcctggtgcagggacaacagctcaacccctacctgagg
cttaaagtacgccgagaccacatcatcgatgatgccctcgtcaggcttgagatgatcgcc
atggagaatcctgcagacttgaagaagcagctgtatgtggagtttgaaggagaacaaggt
gtagatgaaggaggggtttccaaagagttctttcagctcgtcgtggaggagatcttcaac
ccagatattggaatgtttgcgtacgacgagcgcaccaagatgttctggttcaacccgtcg
tcgtttgaaaacgagggtcagttcacgctgatcggcatcgtccttggcctggccatttac
aacaactgcatcctggacgttcacttccccatggtggtctacagaaagctcatgggcaag
aaaggaaccttccgggacctcgcagactccaatccggttctgtaccagagtctgaaggag
ctgtcagagtacgagggtagtgtggaggaggacatgatgatcaccttccagatatcccag
acagacctgttcggaaaccccctcatgtacgacttaagggaaaatggtgatcaaattcca
gtcaccaacgagaacagaaaagagtttgtagctcagtatgcggagtacatgctgaataag
agtgttgagaagcagttcaaagccttcagaagaggttttcacatggtcaccaacgagtcc
ccgctgaaatatttattccggccggaggaaatcgagctgctcatctgtggaagcaggaac
ctagactttcaagcacttgaagaaacgacagaatatgatggcggctacagcagagattca
cgcatcattaaggagttctgggagacgctgcactcgtttgctgaggagcagaagaggctg
ttcctgcagttcaccacgggcacagacagagcccctgtcggaggcctgggaaagctcaag
atgatcatcgccaagaacggccccgacacagacaggttacccacatctcacacctgcttc
aacgtgctgctgctcccggagtacgacaccaaggagaagctgagagagagactgctcaaa
gccatcctctatgccaaagggtttgggatgctctga
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