KEGG   Oncorhynchus mykiss (rainbow trout): 110497044
Entry
110497044         CDS       T07259                                 
Name
(RefSeq) interferon regulatory factor 8
  KO
K09447  interferon regulatory factor 7
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy04620  Toll-like receptor signaling pathway
omy04621  NOD-like receptor signaling pathway
omy04622  RIG-I-like receptor signaling pathway
omy04623  Cytosolic DNA-sensing pathway
omy05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:omy00001]
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    110497044
   04621 NOD-like receptor signaling pathway
    110497044
   04622 RIG-I-like receptor signaling pathway
    110497044
   04623 Cytosolic DNA-sensing pathway
    110497044
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    110497044
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:omy03000]
    110497044
Transcription factors [BR:omy03000]
 Eukaryotic type
  Helix-turn-helix
   Tryptophan clusters interferon-regulating factors
    110497044
SSDB
Motif
Pfam: IRF-3 IRF OYE-like_second_a-b
Other DBs
NCBI-GeneID: 110497044
NCBI-ProteinID: XP_036812217
Ensembl: ENSOMYG00000001046
UniProt: A0A8C7LPW2
LinkDB
Position
2:complement(78560978..78565956)
AA seq 455 aa
MTEVRGSALKMQSRNPKPQFADWLIEQVWTGQYAGLCFVDNNKFRVPWKHISRKDCCEDD
SKIFRAWAVVSGKINTHPNDKAKWKTNFRCVLNNLTKRFMMVEDHSKDSDDPHKVYLIIN
NESNYGSPHIEEIAVEDYDIDIHSSLTSTGYTPPGMEHDNLLKLVNTIDLNQHTEEWAET
YIHTHHPVVPEDCYPFQPLTEPQPVSQNHSPPPVPVPVQQPYDHVNQDALLNLPAAQPSL
CDLEITISYRRREMLKTQVSGPMVQLHYQCDVPEPNAQTLCFPSTDGLLDHKQIEYTNCI
LESVQRGLLLEVRNTGIYGYRQDKCHVFSSTSDPREAHPEPRKMPQNEMVQLLSFDKYMT
ELIAFKENRGGSPDYTIHMCFGEKFPDGKPLEKKLIIVKVVPLICRHFHEMAQGEGASSL
QNDNISLQISHHNSLMELISATWPDGPEHTMGQYF
NT seq 1368 nt   +upstreamnt  +downstreamnt
atgacagaagtacgtggctcagcattaaagatgcaaagccgcaaccccaaacctcagttt
gcggactggctgatagaacaggtgtggaccgggcaatacgccgggttgtgttttgtggac
aacaacaagttcagagtcccgtggaaacacatctctaggaaggactgctgcgaggacgac
agtaaaatattcagggcatgggcagtggtcagtggtaaaatcaacacgcatcccaatgac
aaggcaaagtggaagactaacttccgctgtgtactgaacaacctgaccaagcgtttcatg
atggtggaagaccactccaaggactcagacgacccccataaagtctacctgattatcaac
aatgagtctaactatggaagcccacacatagaggaaattgctgtggaggactatgacatt
gacatccacagctctctcacctctacaggctacacccccccaggcatggagcatgataat
ctactcaagcttgtgaacaccatagacctgaaccaacatactgaggagtgggcagagacc
tatatacacacacaccacccagtggtaccagaagactgctaccccttccagcctctaaca
gagccccagccagtctcccagaaccactcaccgccaccagtcccagtcccagtacagcag
ccatacgaccacgtgaaccaggatgccctgctcaacctgcctgctgcccagccgtctctc
tgtgacctggagatcaccatctcctacaggaggagagagatgctgaagacccaggtgtca
ggccccatggttcagctccactaccagtgtgatgtccctgagcccaacgcccagaccctc
tgcttccctagcactgacggcctgctagaccacaaacagattgaatacaccaactgcatc
ctagagagtgtccaaaggggtcttctcctggaggtacgaaacacgggtatctatggttac
cggcaggacaaatgccatgtgttctctagtactagtgaccccagagaggcacaccctgaa
cccaggaagatgccccaaaatgaaatggtacaactgttgagcttcgacaagtacatgact
gagctgatagcatttaaggagaacagaggaggctctcctgactataccatccacatgtgc
tttggcgagaagttcccagacggaaaacccctggagaagaaactcatcattgtcaaggtg
gttcccttgatctgtcgtcacttccacgagatggcccagggggagggggcatcttccctc
cagaacgacaacatcagcctgcagatctcccaccacaacagcctgatggagcttatcagt
gccacctggcccgacggcccagagcacaccatggggcaatacttctag

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