Oncorhynchus mykiss (rainbow trout): 110497102
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Entry
110497102 CDS
T07259
Name
(RefSeq) alsin isoform X1
KO
K04575
amyotrophic lateral sclerosis 2 protein
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omy03036
]
110497102
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
110497102
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
RCC1_2
MORN
VPS9
RhoGEF
PH
Motif
Other DBs
NCBI-GeneID:
110497102
NCBI-ProteinID:
XP_036808228
Ensembl:
ENSOMYG00000013245
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All DBs
Position
18:24078733..24100642
Genome browser
AA seq
1714 aa
AA seq
DB search
MESQRKSSDEEDSSGERGSLHTWKGYSYSVTPERVLLSRPVLQAALGTRHGVLLVEGGQV
YSFGEFPWKQSQVSEVGPLKPVLESALSGQRVVAVAAGSFHSGALTEDGGVHMWGENSFG
QCGLSSLTVVPNPTPVAVMDPDTSPPHTIRVLELACGEQHSLALSAQHEVWAWGSGCQLG
LVTTIFPVWKPQKVEHLVGRYVLQVACGAFHSLALVRCLPPQESRRPLPDKCGQCNQLLY
TMTDKEDHVIISDSHYCPLGVELLAEGETRLGPGRSPPLGLLSSPSEPLLSSHASDSAPG
PHPSITEHTDYERGRTVAQNGEVLTTTDADISASGTDSDRAVGGVGGARSQNSPYPNDQA
VKEYLKKLSDTSLAEETAKMTIAGASFQPPADSLDLLTSDLIPGVMPVTTSSALNNLVSS
CASAVGERVVSTYEALSLKKMINYYYPGVGGVAGVPGGFPGGPAEVRVRLEESMQGKKSC
STGDIREEEAEGLSRRLSLPGLLSQGRYAVRLLSSFSAHRLLSLSSSYTLMLSPRLLRRA
SRPRVRAVPLTPVGGLPEAGELLPSLQTEVWSWGRGEEGQLGHGDNLPRLQPLCIKCLSS
KEVVLVAAGAHHSLALTAQSQVFSWGSNSSGQLGHMASPTTIPRLAKLSEGIRVWDVGAG
AQHTLLLADGDCYQPILYYSGQQVREGAQDATQDQTEGYSYTQQPVLLPFCMNLGYVSGV
FAGGQSCVALADRNVMGFIASLHELAAAERKFYCKLSSVKNHILRPLLDLESLSTALGPA
STVLLRSLARCYSRLCHLTGQHSASLTANLRRRREFKSLVMLEHASIFLDTYNEYCCSVG
NFLVMGGFQALAKPSLEFFGKCPELLQRLAESSEENIPLSDLLVTLFYLPMRHLHEYGRL
LLKLGTCFEVSSVDYQKLQDGCSKFEALALHLKRRRKEAEYTYHFWKSFPGKMTVSGLDS
LRKPRRRLICESSNKALTLQNSGRFSVNWFILFNDALVHAQGVVPYKSLFSTHHVFPLAT
LWVEPIPEENTGLHGLKLISPEETFTLLACSSMEKAKWLRSINQAVDQAMTGAGQSGSGA
GQRAEPPISRTASYTFYKDSRLKEATYEGRWLAGKPNGRGMVKWLDGRIYTGTFKNGLED
GFGDYVMPSKTLNLNDHYQGHWKEGKMHGIGTYKYATGELYEGSFQDNMRHGHGMLRSGT
LNSSSPSVFIGQWVHDKKTGYGVFDDIIRGEKYMGMWQDDQRQGTGVIVTQFGLYYEGAF
NNNKMQGTGVLLSEDNTTYEGEFSEDWTLNGKGVLTMPNGDYFEGSFTGEWGSGLKVTGS
FFKPNLYDSDGDKGRAVKLGRLAVPPEEKWRVVFEECWMRLGCEAPGQGENQRAWENIAV
ALTTSRRQHRDSPEMNLSRTQNRMLESLEFIPQHHVGPVTMEKYDSIRRYLIKACDMPLH
PLGRLMETLVAVYRMTYVGVGANRRLLLQAVNEIMSYLARIFQLVRFLFPDLPEEGGAIP
EPSSDPQDKKDSNCADTQLESPKPGRVVSSSALLLPVLLPRLYPPLFTLYALEKEKEDDV
YWECVLRLNKQPDVALLAFLGVQHKFWPVSVPVLGEKTEVVSSTKDACFASATETLQQIS
TTFTPSDKLQVIQLTFEEITKEVMSSLEDNFLWSMDDLFPVFLYVVLRARIRNLGSEVSL
IEDLMDPCVQHGEHGIMFTTLKACYYQIQHEKTT
NT seq
5145 nt
NT seq
+upstream
nt +downstream
nt
atggagtcccagaggaaaagctctgatgaggaggacagttcaggggagcgagggtcgctc
cacacctggaagggctactcctatagtgtcaccccagagagagtgctcctgtccaggcct
gtgctgcaggctgccctggggacacgccatggggttctactggtggagggcgggcaggtg
tacagcttcggtgagttcccatggaaacagagccaggtgtcagaggtgggccccctgaag
cctgtcctagagagcgctctcagtggccagcgcgtggtcgccgtggcagcgggcagtttc
catagcggggcgcttactgaggacggcggggtccacatgtggggggagaactcgttcggc
cagtgtggcctgtccagcctcactgtagtccccaatcctactccagtggctgtcatggac
cccgacaccagccccccccataccatccgggtcctggagctggcctgcggggagcagcac
tcccttgctctctctgcccagcacgaggtgtgggcctggggcagcggctgccagctgggc
ctggtcaccaccatcttccccgtttggaagccccaaaaggtggagcacctggtgggcaga
tacgtccttcaggtggcctgtggggccttccacagccttgccttggtgcgttgcctacca
cctcaggagtcccggcggcccctgccagacaagtgtggccagtgcaaccagctgctctac
accatgacggacaaggaggaccacgtcattatctcagatagtcattactgccccctaggg
gtggagttgctggctgaaggagagaccaggctggggcctggaaggtcccctccactaggg
cttctgagctccccttcagagcccctcctctcctctcatgcctctgactcagcgccaggt
ccccatccctccataacagaacatacagactatgagagggggaggacagtggcacagaat
ggggaagtcttgaccaccacagatgctgacatctctgcttctgggacagactctgatcga
gctgttggaggtgtggggggtgcaaggtctcagaactccccctaccctaatgatcaggca
gtgaaagaatatctcaagaaactgtctgacacctctttggctgaggagactgccaagatg
accatagcaggagcaagttttcagcccccagcagatagccttgacctcctgacctctgac
ctcatccccggggtcatgccagtgaccaccagctctgccctcaacaacctggtctcatcc
tgtgcctccgccgtgggcgagagagtggtctccacctacgaggctctgtccctgaagaag
atgattaactactactaccctggggttgggggtgtagcaggagtacccggtgggtttcca
gggggacccgcggaggtgcgggtgcgtctggaggagtccatgcaggggaagaagagctgc
agcacgggggatatccgtgaggaagaagccgagggcctgagtcgacgtctctctctgcct
ggactcctctctcagggtagatacgctgttcgtctcttatcctccttctctgctcatcgc
ctcttatccttatcttcctcctatactctgatgttgtcccccaggttgctgcggagggcc
agccggcccagggtgcgagcggtgcccctcacccctgtgggagggctcccagaggcgggg
gagctgctcccctccctgcagaccgaggtgtggagctgggggcggggcgaggagggccag
ctaggccacggggacaacctccccaggctgcagccactgtgcatcaagtgcctgagcagt
aaggaggtggtgcttgtggctgctggggcacatcactccctggccctgactgcacagtcc
caggtcttctcctggggtagtaacagctctggccagctgggacacatggcatctcctact
actatccctcgccttgccaagctgtctgaggggatccgtgtctgggacgtgggtgcgggg
gcgcagcacaccctcctcctggccgatggggactgttatcagcccatcctttactatagc
ggacagcaggtcagagagggggcgcaggacgcaacccaggaccagacggaggggtacagc
tacacccagcaaccagtgctgctccccttctgcatgaacttgggctacgtgagcggtgtg
tttgcggggggccagagctgcgtggcgctagccgaccgcaacgtcatgggtttcatcgcc
agcctccacgagctggctgctgctgagaggaagttctactgcaagctgagctctgtgaag
aaccacatcctgcgccccttgttggacctggagtcgttgagtacagctctaggcccggcg
tccacagtgctgctacggagcctggcgaggtgttatagccgcctgtgtcacctgactggc
cagcactctgcctccctcaccgccaaccttcgccgccgccgggagtttaaaagcctggtt
atgctggagcatgccagcatcttcctggacacgtacaatgagtactgctgctctgtgggt
aacttcctggtgatggggggcttccaggctctggccaagccctcgctagaattctttggg
aagtgtccagagctgttgcagcggctggcagagtccagcgaggagaacattcctctgagt
gacctgttggtgacgctcttctacctgcccatgagacaccttcacgagtatggcaggctg
ctgctcaaactgggaacctgcttcgaggtgagctcagtggactaccagaagctgcaggac
ggctgctctaagtttgaggccctggctcttcatctgaagaggaggaggaaagaggcagag
tacacataccacttctggaagagcttccctggcaagatgacggtcagtggcctggattcc
ctgcgtaagccccgccggaggctgatctgtgagagcagtaacaaggccctgacgctacag
aactctggaaggttctctgtcaactggttcatcctcttcaacgatgcactcgtccacgct
cagggagtggttccctataaaagccttttctccacccaccacgtcttcccattggccaca
ctgtgggtcgagcccatcccggaggagaacactggcctgcatggactgaagttgatctca
cctgaggagaccttcaccctgttggcctgttcttccatggagaaggccaagtggcttcgc
tcaatcaaccaggcggtggaccaggccatgactggggcggggcagtcaggctcaggggca
gggcagagggcggagcctcccatctcccggaccgcctcctacaccttctacaaggacagc
cgtctgaaggaggccacctacgagggtcgctggctggccggcaagcccaatgggaggggt
atggtgaagtggcttgatgggagaatttacacggggacgttcaagaacggactggaggat
ggttttggagattacgttatgcccagcaagacgttgaacctgaacgaccactatcaaggc
cactggaaagaagggaagatgcacggcatcggaacgtacaagtatgctacaggtgagttg
tacgagggctcgttccaggacaacatgcgccacggtcacgggatgctgcgcagcggcacg
ctgaactcctcctcccccagcgtcttcatcggccaatgggtgcacgacaagaagacgggc
tacggcgtctttgatgacatcatcagaggagagaagtacatgggcatgtggcaggatgac
cagcggcagggcacgggcgtcatagtaacccagtttggcctgtactacgagggagccttc
aacaacaacaagatgcagggcacaggggtcctgctgtctgaggacaacaccacatatgaa
ggagagttctcggaggactggactctcaacggaaagggtgtgctgactatgcctaatggg
gactactttgagggctccttcaccggggagtggggctccggcctgaaggtcaccggatcc
ttcttcaaacccaacctctacgactcagacggggacaagggtcgcgctgttaagctgggg
cgcctggcagtgcctccggaggagaagtggagggtagtgtttgaggagtgttggatgagg
ctgggctgtgaggcccctggccagggagagaaccagcgagcctgggagaacatcgctgta
gccttgaccaccagcaggagacagcacagagacagcccggagatgaacctgagtcggact
caaaacagaatgctggagagtctggagttcatccctcagcatcatgttggtcctgttacc
atggagaagtatgacagtatccgacgttacctcatcaaggcgtgtgacatgcccctgcac
cccctgggcaggctgatggagaccctggtggctgtctacaggatgacctacgtgggggtg
ggggccaaccgccgccttctgctgcaggctgtcaacgagatcatgtcctacctggcccgc
atcttccagctcgtcaggttcctgtttccagatctgcctgaggagggtggagcgatccct
gaaccatcctctgacccccaggacaagaaggactccaactgcgcagacacccagctagaa
tcccccaaacctgggcgtgtggtgagtagctccgctctgctcctgccggtgttgctgcct
cgtctctacccccctctcttcaccctgtacgccctggagaaggagaaggaggacgacgtg
tactgggagtgtgtcctccgcctcaacaaacagccagacgtggccctgctcgccttcctc
ggcgtgcaacataagttttggccggtttcggttccagtgctgggggagaagaccgaggtt
gtgtccagcacaaaagacgcctgttttgcctctgcaacggagaccttacagcagatcagc
acaacgttcaccccatccgacaagctgcaggtgatccagctgacattcgaggagatcaca
aaggaagtgatgtcatctctggaggataacttcctgtggtccatggacgacctgtttcct
gtgttcctctacgtggtgctgcgcgcccggatcaggaacctggggtcagaggtgagtctg
atagaggacctgatggacccctgtgtacagcacggagaacacggcatcatgttcaccaca
ctcaaggcgtgttactatcagatccagcatgagaagaccacataa
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integrated database retrieval system