KEGG   Oncorhynchus mykiss (rainbow trout): 110497102
Entry
110497102         CDS       T07259                                 
Name
(RefSeq) alsin isoform X1
  KO
K04575  amyotrophic lateral sclerosis 2 protein
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:omy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:omy03036]
    110497102
Chromosome and associated proteins [BR:omy03036]
 Eukaryotic type
  Centrosome formation proteins
   Other centrosome associated proteins
    110497102
SSDB
Motif
Pfam: RCC1 RCC1_2 MORN VPS9 RhoGEF PH
Other DBs
NCBI-GeneID: 110497102
NCBI-ProteinID: XP_036808228
Ensembl: ENSOMYG00000013245
LinkDB
Position
18:24078733..24100642
AA seq 1714 aa
MESQRKSSDEEDSSGERGSLHTWKGYSYSVTPERVLLSRPVLQAALGTRHGVLLVEGGQV
YSFGEFPWKQSQVSEVGPLKPVLESALSGQRVVAVAAGSFHSGALTEDGGVHMWGENSFG
QCGLSSLTVVPNPTPVAVMDPDTSPPHTIRVLELACGEQHSLALSAQHEVWAWGSGCQLG
LVTTIFPVWKPQKVEHLVGRYVLQVACGAFHSLALVRCLPPQESRRPLPDKCGQCNQLLY
TMTDKEDHVIISDSHYCPLGVELLAEGETRLGPGRSPPLGLLSSPSEPLLSSHASDSAPG
PHPSITEHTDYERGRTVAQNGEVLTTTDADISASGTDSDRAVGGVGGARSQNSPYPNDQA
VKEYLKKLSDTSLAEETAKMTIAGASFQPPADSLDLLTSDLIPGVMPVTTSSALNNLVSS
CASAVGERVVSTYEALSLKKMINYYYPGVGGVAGVPGGFPGGPAEVRVRLEESMQGKKSC
STGDIREEEAEGLSRRLSLPGLLSQGRYAVRLLSSFSAHRLLSLSSSYTLMLSPRLLRRA
SRPRVRAVPLTPVGGLPEAGELLPSLQTEVWSWGRGEEGQLGHGDNLPRLQPLCIKCLSS
KEVVLVAAGAHHSLALTAQSQVFSWGSNSSGQLGHMASPTTIPRLAKLSEGIRVWDVGAG
AQHTLLLADGDCYQPILYYSGQQVREGAQDATQDQTEGYSYTQQPVLLPFCMNLGYVSGV
FAGGQSCVALADRNVMGFIASLHELAAAERKFYCKLSSVKNHILRPLLDLESLSTALGPA
STVLLRSLARCYSRLCHLTGQHSASLTANLRRRREFKSLVMLEHASIFLDTYNEYCCSVG
NFLVMGGFQALAKPSLEFFGKCPELLQRLAESSEENIPLSDLLVTLFYLPMRHLHEYGRL
LLKLGTCFEVSSVDYQKLQDGCSKFEALALHLKRRRKEAEYTYHFWKSFPGKMTVSGLDS
LRKPRRRLICESSNKALTLQNSGRFSVNWFILFNDALVHAQGVVPYKSLFSTHHVFPLAT
LWVEPIPEENTGLHGLKLISPEETFTLLACSSMEKAKWLRSINQAVDQAMTGAGQSGSGA
GQRAEPPISRTASYTFYKDSRLKEATYEGRWLAGKPNGRGMVKWLDGRIYTGTFKNGLED
GFGDYVMPSKTLNLNDHYQGHWKEGKMHGIGTYKYATGELYEGSFQDNMRHGHGMLRSGT
LNSSSPSVFIGQWVHDKKTGYGVFDDIIRGEKYMGMWQDDQRQGTGVIVTQFGLYYEGAF
NNNKMQGTGVLLSEDNTTYEGEFSEDWTLNGKGVLTMPNGDYFEGSFTGEWGSGLKVTGS
FFKPNLYDSDGDKGRAVKLGRLAVPPEEKWRVVFEECWMRLGCEAPGQGENQRAWENIAV
ALTTSRRQHRDSPEMNLSRTQNRMLESLEFIPQHHVGPVTMEKYDSIRRYLIKACDMPLH
PLGRLMETLVAVYRMTYVGVGANRRLLLQAVNEIMSYLARIFQLVRFLFPDLPEEGGAIP
EPSSDPQDKKDSNCADTQLESPKPGRVVSSSALLLPVLLPRLYPPLFTLYALEKEKEDDV
YWECVLRLNKQPDVALLAFLGVQHKFWPVSVPVLGEKTEVVSSTKDACFASATETLQQIS
TTFTPSDKLQVIQLTFEEITKEVMSSLEDNFLWSMDDLFPVFLYVVLRARIRNLGSEVSL
IEDLMDPCVQHGEHGIMFTTLKACYYQIQHEKTT
NT seq 5145 nt   +upstreamnt  +downstreamnt
atggagtcccagaggaaaagctctgatgaggaggacagttcaggggagcgagggtcgctc
cacacctggaagggctactcctatagtgtcaccccagagagagtgctcctgtccaggcct
gtgctgcaggctgccctggggacacgccatggggttctactggtggagggcgggcaggtg
tacagcttcggtgagttcccatggaaacagagccaggtgtcagaggtgggccccctgaag
cctgtcctagagagcgctctcagtggccagcgcgtggtcgccgtggcagcgggcagtttc
catagcggggcgcttactgaggacggcggggtccacatgtggggggagaactcgttcggc
cagtgtggcctgtccagcctcactgtagtccccaatcctactccagtggctgtcatggac
cccgacaccagccccccccataccatccgggtcctggagctggcctgcggggagcagcac
tcccttgctctctctgcccagcacgaggtgtgggcctggggcagcggctgccagctgggc
ctggtcaccaccatcttccccgtttggaagccccaaaaggtggagcacctggtgggcaga
tacgtccttcaggtggcctgtggggccttccacagccttgccttggtgcgttgcctacca
cctcaggagtcccggcggcccctgccagacaagtgtggccagtgcaaccagctgctctac
accatgacggacaaggaggaccacgtcattatctcagatagtcattactgccccctaggg
gtggagttgctggctgaaggagagaccaggctggggcctggaaggtcccctccactaggg
cttctgagctccccttcagagcccctcctctcctctcatgcctctgactcagcgccaggt
ccccatccctccataacagaacatacagactatgagagggggaggacagtggcacagaat
ggggaagtcttgaccaccacagatgctgacatctctgcttctgggacagactctgatcga
gctgttggaggtgtggggggtgcaaggtctcagaactccccctaccctaatgatcaggca
gtgaaagaatatctcaagaaactgtctgacacctctttggctgaggagactgccaagatg
accatagcaggagcaagttttcagcccccagcagatagccttgacctcctgacctctgac
ctcatccccggggtcatgccagtgaccaccagctctgccctcaacaacctggtctcatcc
tgtgcctccgccgtgggcgagagagtggtctccacctacgaggctctgtccctgaagaag
atgattaactactactaccctggggttgggggtgtagcaggagtacccggtgggtttcca
gggggacccgcggaggtgcgggtgcgtctggaggagtccatgcaggggaagaagagctgc
agcacgggggatatccgtgaggaagaagccgagggcctgagtcgacgtctctctctgcct
ggactcctctctcagggtagatacgctgttcgtctcttatcctccttctctgctcatcgc
ctcttatccttatcttcctcctatactctgatgttgtcccccaggttgctgcggagggcc
agccggcccagggtgcgagcggtgcccctcacccctgtgggagggctcccagaggcgggg
gagctgctcccctccctgcagaccgaggtgtggagctgggggcggggcgaggagggccag
ctaggccacggggacaacctccccaggctgcagccactgtgcatcaagtgcctgagcagt
aaggaggtggtgcttgtggctgctggggcacatcactccctggccctgactgcacagtcc
caggtcttctcctggggtagtaacagctctggccagctgggacacatggcatctcctact
actatccctcgccttgccaagctgtctgaggggatccgtgtctgggacgtgggtgcgggg
gcgcagcacaccctcctcctggccgatggggactgttatcagcccatcctttactatagc
ggacagcaggtcagagagggggcgcaggacgcaacccaggaccagacggaggggtacagc
tacacccagcaaccagtgctgctccccttctgcatgaacttgggctacgtgagcggtgtg
tttgcggggggccagagctgcgtggcgctagccgaccgcaacgtcatgggtttcatcgcc
agcctccacgagctggctgctgctgagaggaagttctactgcaagctgagctctgtgaag
aaccacatcctgcgccccttgttggacctggagtcgttgagtacagctctaggcccggcg
tccacagtgctgctacggagcctggcgaggtgttatagccgcctgtgtcacctgactggc
cagcactctgcctccctcaccgccaaccttcgccgccgccgggagtttaaaagcctggtt
atgctggagcatgccagcatcttcctggacacgtacaatgagtactgctgctctgtgggt
aacttcctggtgatggggggcttccaggctctggccaagccctcgctagaattctttggg
aagtgtccagagctgttgcagcggctggcagagtccagcgaggagaacattcctctgagt
gacctgttggtgacgctcttctacctgcccatgagacaccttcacgagtatggcaggctg
ctgctcaaactgggaacctgcttcgaggtgagctcagtggactaccagaagctgcaggac
ggctgctctaagtttgaggccctggctcttcatctgaagaggaggaggaaagaggcagag
tacacataccacttctggaagagcttccctggcaagatgacggtcagtggcctggattcc
ctgcgtaagccccgccggaggctgatctgtgagagcagtaacaaggccctgacgctacag
aactctggaaggttctctgtcaactggttcatcctcttcaacgatgcactcgtccacgct
cagggagtggttccctataaaagccttttctccacccaccacgtcttcccattggccaca
ctgtgggtcgagcccatcccggaggagaacactggcctgcatggactgaagttgatctca
cctgaggagaccttcaccctgttggcctgttcttccatggagaaggccaagtggcttcgc
tcaatcaaccaggcggtggaccaggccatgactggggcggggcagtcaggctcaggggca
gggcagagggcggagcctcccatctcccggaccgcctcctacaccttctacaaggacagc
cgtctgaaggaggccacctacgagggtcgctggctggccggcaagcccaatgggaggggt
atggtgaagtggcttgatgggagaatttacacggggacgttcaagaacggactggaggat
ggttttggagattacgttatgcccagcaagacgttgaacctgaacgaccactatcaaggc
cactggaaagaagggaagatgcacggcatcggaacgtacaagtatgctacaggtgagttg
tacgagggctcgttccaggacaacatgcgccacggtcacgggatgctgcgcagcggcacg
ctgaactcctcctcccccagcgtcttcatcggccaatgggtgcacgacaagaagacgggc
tacggcgtctttgatgacatcatcagaggagagaagtacatgggcatgtggcaggatgac
cagcggcagggcacgggcgtcatagtaacccagtttggcctgtactacgagggagccttc
aacaacaacaagatgcagggcacaggggtcctgctgtctgaggacaacaccacatatgaa
ggagagttctcggaggactggactctcaacggaaagggtgtgctgactatgcctaatggg
gactactttgagggctccttcaccggggagtggggctccggcctgaaggtcaccggatcc
ttcttcaaacccaacctctacgactcagacggggacaagggtcgcgctgttaagctgggg
cgcctggcagtgcctccggaggagaagtggagggtagtgtttgaggagtgttggatgagg
ctgggctgtgaggcccctggccagggagagaaccagcgagcctgggagaacatcgctgta
gccttgaccaccagcaggagacagcacagagacagcccggagatgaacctgagtcggact
caaaacagaatgctggagagtctggagttcatccctcagcatcatgttggtcctgttacc
atggagaagtatgacagtatccgacgttacctcatcaaggcgtgtgacatgcccctgcac
cccctgggcaggctgatggagaccctggtggctgtctacaggatgacctacgtgggggtg
ggggccaaccgccgccttctgctgcaggctgtcaacgagatcatgtcctacctggcccgc
atcttccagctcgtcaggttcctgtttccagatctgcctgaggagggtggagcgatccct
gaaccatcctctgacccccaggacaagaaggactccaactgcgcagacacccagctagaa
tcccccaaacctgggcgtgtggtgagtagctccgctctgctcctgccggtgttgctgcct
cgtctctacccccctctcttcaccctgtacgccctggagaaggagaaggaggacgacgtg
tactgggagtgtgtcctccgcctcaacaaacagccagacgtggccctgctcgccttcctc
ggcgtgcaacataagttttggccggtttcggttccagtgctgggggagaagaccgaggtt
gtgtccagcacaaaagacgcctgttttgcctctgcaacggagaccttacagcagatcagc
acaacgttcaccccatccgacaagctgcaggtgatccagctgacattcgaggagatcaca
aaggaagtgatgtcatctctggaggataacttcctgtggtccatggacgacctgtttcct
gtgttcctctacgtggtgctgcgcgcccggatcaggaacctggggtcagaggtgagtctg
atagaggacctgatggacccctgtgtacagcacggagaacacggcatcatgttcaccaca
ctcaaggcgtgttactatcagatccagcatgagaagaccacataa

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