Oncorhynchus mykiss (rainbow trout): 110497165
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Entry
110497165 CDS
T07259
Name
(RefSeq) leucine-rich repeat-containing protein 4C
KO
K07523
netrin-G1 ligand
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
110497165
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
V-set
LRR_14
Ig_2
LRR_9
LRRNT
DUF7617
Sp38
FlK
Ig_6
DUF4293
Syndecan
CMV_1a
Motif
Other DBs
NCBI-GeneID:
110497165
NCBI-ProteinID:
XP_021428799
Ensembl:
ENSOMYG00000001817
LinkDB
All DBs
Position
2:79916922..80048182
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AA seq
645 aa
AA seq
DB search
MLNKMTSSWQQQTMRGPRWNRVLSDPLFVLLLALQLLAVAGLVRAQTCPSVCSCSNQFSK
VICTRRGLRDVPDGISTNTRYLNLQENLIQVIKVDSFKHLRHLEILQLSKNHIRNIEIGA
FNGLASLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDL
GELKRLSYISEGAFEGLSNLRYLNLGMCNLKEIPNLIPLVKLDELEMSGNQLTVIRPGSF
KGLIHLQKLWMMHAQIQTIERNSFDDLQSLVELNLAHNNLTLLPHDLFTPLHHLERVHLH
HNPWNCNCDILWLSWWLKEMVPANTSCCARCSSPASHKGRYIGELDQNYFHCYAPVIVEP
PADLNVTEGMAAELKCRASSLTSVSWITPNGSIMTHGAYKIRISVLNDGTLNFTNVTMQD
TGTYTCMVSNSAGNTTASATLNVSSTENVLSYFTTVTVETIEPVHDEGRTTVGHNVGPTP
SAGSWETVSSTSTTTTTARTPLSTRVTEKTFTIPVTDLNGGSMTGLDEVMKTTKIIIGCF
VAITLMAAVMLIIFYKMRKQHHQQNHHAPQRTIEIINVDEDCVTGGPAMEGHLTLPPLEH
EHLNHYNTYKTAYNHVSTINSIHSSAHEPLLIRASSKDNVQETQI
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacaaaatgacctcttcttggcagcagcagacgatgagaggtcctaggtggaac
cgggtcctgtccgaccctttgttcgtgctgcttctggccctccagctcctggcggtggcg
ggcctagtgcgcgcgcagacctgcccatctgtctgctcctgcagcaaccagttcagcaag
gtgatctgcacccgtcggggactacgtgatgtcccagacggcatctccaccaacacacga
tatctgaaccttcaggagaacctcatccaggtgatcaaggtggacagcttcaagcacctg
cggcacctggagatcctccagctcagcaagaaccacatccgcaacattgagattggggct
ttcaacggcctggctagtctcaacaccctggagctgttcgacaaccgcctcaccaccatc
cccaacggggcctttgagtacctctccaaactcaaggagctgtggctgaggaacaaccca
atcgagagcattccctcgtatgcgttcaacagggtgccctcactacggaggctggactta
ggggaactgaaacgcctctcgtatatctcagagggagctttcgaggggctcagcaacctg
cgctacttgaacctgggcatgtgcaatctgaaggagattcccaacctcatacccctggtc
aagctggacgagctagagatgtcagggaatcagctgacggtcatcagacccggctccttc
aaagggctgatccacctgcagaagctgtggatgatgcacgcccagatccagaccattgag
aggaactcctttgatgacctgcagtcgcttgtggagctcaacctggcccacaacaacctc
actctgctgcctcatgatctcttcacccccctgcaccacctggagagagtccacctccat
cacaacccctggaactgcaactgtgacatcctgtggctcagctggtggctcaaagagatg
gtgccggccaacaccagctgctgcgcccgctgcagttccccagcaagccacaaggggcgc
tacattggtgagctggatcagaactatttccattgttatgcaccggttattgtagagcct
ccggctgacctgaacgtgacagagggcatggcagcggagctgaagtgcagggccagttct
ctgacctcagtcagttggattacacccaatggctccattatgacccacggtgcatacaag
atccgcatttccgtgctaaacgatggcactctcaacttcaccaacgtcaccatgcaggac
acgggcacctacacctgcatggtgagcaactcagccggcaataccacagcatctgccacg
ctcaacgtgtcatccacagagaacgtcctcagctactttaccacagtgacagtggagacc
atagagccagtgcatgacgaggggcgcaccacagttgggcataatgtgggccctaccccc
tctgccggctcctgggagaccgtctcatccacctctaccaccaccaccacggcccggaca
cccctctccacacgggtcacagagaagacctttaccatccccgtcacagacctgaacggt
ggctcaatgaccggcctggacgaggtgatgaagaccaccaagatcatcataggctgcttt
gtggccatcaccctcatggccgcagtcatgctcatcatcttctacaagatgagaaagcag
caccaccagcagaatcaccatgcaccccagcgcaccatcgagatcatcaacgtggacgag
gactgtgtgacgggcgggccggccatggagggccacctgactcttcccccgctcgagcat
gagcacctcaaccattacaacacctataagactgcgtacaaccacgtctccaccatcaac
tccatacacagctcggcgcacgaacctttgttaatccgggccagctcgaaagacaatgta
caagagacccagatctaa
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