Oncorhynchus mykiss (rainbow trout): 110497201
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Entry
110497201 CDS
T07259
Symbol
sclt1
Name
(RefSeq) sodium channel and clathrin linker 1 isoform X1
KO
K25400
sodium channel and clathrin linker 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
omy03037
]
110497201 (sclt1)
Cilium and associated proteins [BR:
omy03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
110497201 (sclt1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomyosin
Mce4_CUP1
DUF3774
Motif
Other DBs
NCBI-GeneID:
110497201
NCBI-ProteinID:
XP_036810000
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Position
19:7560410..7575349
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AA seq
688 aa
AA seq
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MSTEVEFLRDQVQRLNSALSHYQDRHRSEATSAPQGEEETHAETPAPWLSDQSIMAPLLS
EYDRHMEDMTEQLQSYQMQMTAIRLKLDTVVKENERLHAELRESVERQLQTLPVSTGSGV
EGDTLGDEGLISNLHQQIQLSVQERDQAMELWRASAQELDRLQQLYQITTSDGQLHVAEQ
QRLKDQLIQFQQHVQKLQVTNQKLESTNQQFLKTLTEQSTDMEELRNQLRSAKADLRMAT
AKVEEMTKLMQNVQDQIQRREDDAAEAHGREEASDRRLHHLQSALSQLEARLKAASQEAE
GVRREQVVWERQVGELQVRCASLEEERYEAFSKVRDSIQLAEEASLQKDQALLREKQKSE
ELDRMNEAVRQLIQDAAIRTRKEVENVRKQCNSQIHRMAEELSALQLECADKESQMERSM
REMRAVEEELEKVYKEGRGEPEYRKMEVLHQRSLNAERLKDDMNITLQSTHNKMKKLEMD
YSEELSRCQEEVRRLQGSLSAAREDCSGVSEERLQLQQENMQLRREMEELRKASMMTQRR
AKQQVSQMEQEYSLKEQGLEARVRELEESSRSSSADLTRLLSAQQKTSQRWKEEAKTLTL
TFHTKLTSLKGELSRQKQRCQELEIQLVTDHETIVEYERQMAEYQEKNSRLQRRLTQAEQ
KATTASQQLSIMTSQRRKTSSMADLESL
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgtccactgaagtcgagtttttgcgtgatcaagtacaaaggctgaactctgccttgagt
cactatcaggataggcaccgctctgaagccacatcagcaccacagggtgaagaggagact
cacgcagagaccccagccccctggctgtctgaccagagtataatggctcccctcctatca
gagtatgaccgtcacatggaagacatgactgaacaactgcagagctaccagatgcagatg
actgccatcagactgaagctggacacggtggtcaaggagaatgaacggctgcatgccgag
ctgagggagtccgtagagaggcagctgcagaccctcccagtcagtacaggatcaggggtg
gagggggacacactgggggacgaggggctcatcagcaaccttcaccaacagatacagctc
tctgtacaggagcgagaccaggccatggagctgtggcgggcctcagcccaggagctggac
cgtttacagcagctctaccagataaccacctctgacggacagctccatgttgccgagcaa
cagcgcctcaaggatcaactgatccaattccagcagcacgtccagaaactccaagttacc
aatcagaaactggaatctaccaaccagcagttcctgaagacgctgacagaacagagcacg
gatatggaggagctacgcaaccagctcagatcggccaaagcagatctgaggatggccaca
gccaaggtggaggagatgaccaagctgatgcagaacgtccaggaccagatacagagacgg
gaggacgatgcagcagaggctcatggtagagaggaggcctcagatcgaagactccaccat
ctccagtcagccctcagtcagctagaggccaggttgaaggcagccagccaggaggctgag
ggtgtacgcagggagcaggtggtgtgggagaggcaggtgggggagctgcaggtgcgctgt
gcctctctggaggaggagcgctacgaggccttctccaaggtcagagactccatccagctg
gctgaggaggcctctctacagaaggaccaggccctgttgagagagaaacagaaatctgag
gagctggacaggatgaatgaagccgtcagacaactgatccaggatgctgccatacgcacc
aggaaagaggtagagaacgtacgtaaacagtgcaactcacagatccatcggatggctgag
gagttgtcggctctacaactggagtgtgcagataaagagtctcagatggagaggtccatg
agagagatgcgggcagtggaggaggaactggagaaggtgtataaggagggtagaggagag
ccagagtacaggaagatggaggtcctccaccagaggtctctgaatgctgagagactgaag
gacgacatgaacatcaccctgcagagcacacacaacaagatgaagaaactggagatggac
tacagtgaggagttgtcccggtgccaggaggaggtgcggcggctgcaggggtctctgtct
gcagccagggaggactgcagcggggtcagcgaggagcggctccagctgcagcaggagaac
atgcagctccgcagggagatggaggagctacgcaaggctagcatgatgacccagaggaga
gctaagcagcaggtttcccagatggagcaggagtattccctaaaggagcagggtctggaa
gcccgggtcagggagctggaggaaagcagtaggagctccagtgctgacctgacccgcctc
ctctctgcccagcagaagaccagccagcgctggaaagaggaggccaagaccctcaccctg
accttccacaccaaactcaccagcctcaagggtgagctgagtcgacagaagcaacgttgt
caggaactggagatccagctggtgactgaccacgagaccatagtagagtacgagaggcag
atggcagagtatcaggagaagaacagtcgtctccagaggcgtttgactcaggcagaacag
aaggcaactacagcctcacaacagctgagtataatgacgtcacagaggaggaaaacatcg
tccatggcagacctggagtctctatag
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