Oncorhynchus mykiss (rainbow trout): 110497369
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Entry
110497369 CDS
T07259
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm6
KO
K12625
U6 snRNA-associated Sm-like protein LSm6
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03018
RNA degradation
omy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110497369
09123 Folding, sorting and degradation
03018 RNA degradation
110497369
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110497369
03041 Spliceosome [BR:
omy03041
]
110497369
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110497369
mRNA degradation factors
5'-3' decay
Lsm complex
110497369
Spliceosome [BR:
omy03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
110497369
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
110497369
NCBI-ProteinID:
XP_021429115
Ensembl:
ENSOMYG00000011839
LinkDB
All DBs
Position
19:11225326..11227282
Genome browser
AA seq
80 aa
AA seq
DB search
MSLRKQTPSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIAVEQTEEYVNGQLKNKY
GDAFLRGNNVLYISTQKRKM
NT seq
243 nt
NT seq
+upstream
nt +downstream
nt
atgagtctcagaaagcagacccccagtgactttctgaagcagatcattggcagaccagtt
gtggtcaagctcaactctggagtggattacagaggtgtcctagcctgtctggatggctat
atgaacattgcagtggagcagacagaggagtatgtcaatggccagctgaagaacaagtat
ggtgatgccttcctgagaggaaacaatgtgttatatatcagcacccagaagaggaagatg
tga
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integrated database retrieval system
