Oncorhynchus mykiss (rainbow trout): 110497467
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Entry
110497467 CDS
T07259
Symbol
nedd1
Name
(RefSeq) protein NEDD1 isoform X1
KO
K16547
protein NEDD1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omy03036
]
110497467 (nedd1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
omy04812
]
110497467 (nedd1)
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Other PCM proteins
110497467 (nedd1)
Microtubules and associated factors
gamma-tubulin ring complex
110497467 (nedd1)
Cytoskeleton proteins [BR:
omy04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
110497467 (nedd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
WDR55
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_HPS5
WD40_RFWD3
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
NBCH_WD40
WDR90_beta-prop_4th
WD40_like
PEP5_VPS11_N
Beta-prop_IFT122_1st
Beta-prop_Vps41
Beta-prop_DCAF4
eIF2A
Beta-prop_SPT8
Beta-prop_WDR35_TULP_N
Beta-prop_LRRK2
Frtz
KNTC1_N
VPS8_N
Cytochrom_D1
SdiA-regulated
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
110497467
NCBI-ProteinID:
XP_021429265
Ensembl:
ENSOMYG00000003390
UniProt:
A0A8C7NFZ4
LinkDB
All DBs
Position
2:81266020..81283516
Genome browser
AA seq
699 aa
AA seq
DB search
MEEVTRLVSSGDCVKIWDSASMTVLEQFNPHSATHPVAQVCWSSNNQYLVSASSIGDKLV
VSSLKSSPIPVVELAEGKMQTRVSLNSTSQYLVSGGLDNSVNIWDLKAKRLHRTLKDHNE
EVTCVSFNGNDSYIASGSTSGDIILHSITTNLSSKAFGHGTNQPIHDLKYSVVKRSLLGS
VSDSGSVVLWDANTQKELHVFDGAHKAPASGLAFSPANDLLFVTVGLDKKIICYDTSSKI
VLRSMRVESPLTAIDFTPDGAGLVVGSTQGRLYMYDLRNLSAPTKTATAHKTSITSLRFQ
SSQSRHLKSSKMASSKSSSAHTSKRISARLGNTYLPTATHSSTSAPPSSLLAPHTVDGGD
GQAQGTGSSVEVVSREAEGQPGADRLPSLDKFSSVGRNSLDIFSPVRDDYKAHGMGGDAP
GGIKGNGTSLDMFSREGEGQNSTEKFSKVGRNSLDIFSPVREDYKSHGMTADVTSGKKGN
NLDFLPSYSGGPPHRKTPLGTPGGGRCYSPLSVFQTPQPIKEEEAEPPAQTDTRDLKRYE
KGGGSSLEGEGPTPHSRPAQLFFTPEPSLRANDMQAQLRYNTPLNGGPPTTAPAGPAVSS
VVASSVSERIVEAVGAEGGGAPLTSLQIQFIRNMIHETLEDFRDACHRDIVNLQVEMVKQ
FYIQLNEIHGLIEKYSVNDTLVEEIEKLREENKRLRANY
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggtgacgcgcctggtatcctcaggcgactgtgtgaagatctgggactcagcc
tccatgacagtgttggaacagttcaacccacacagcgctacacaccctgtggcccaagtg
tgctggagcagcaacaatcagtatcttgtaagcgccagcagtataggagacaagctggtg
gtatccagtctcaagtcctctcctatcccagtggtggaacttgcagaggggaaaatgcag
acccgcgtgagtctgaactcgacgtcccagtacttagtgagcggggggcttgataactcc
gtcaacatctgggatctgaaggccaagaggcttcatcgtaccctcaaggaccacaatgaa
gaggtgacgtgtgtgtcctttaatggcaatgacagctacatcgcatcaggctccaccagt
ggtgacatcatcctgcacagcatcaccaccaacctgtctagtaaggcctttggacacggc
accaaccagcccatccacgacctgaagtactctgtggtgaagcgctccctgctgggcagt
gtgtcagatagtggctctgtagtcctgtgggacgccaacactcagaaagagctgcacgta
tttgatggagcccacaaggcccccgcctcgggcctggccttctccccagccaatgacctg
ctctttgtcaccgtgggcctggacaagaagatcatctgctacgacacctccagcaagatt
gttctccgcagcatgcgtgtggagtccccattgaccgccattgacttcactccagacggg
gcaggcctggtggtgggctccacccagggcagactgtacatgtacgacctgcgcaacctc
agcgctcccaccaagactgccaccgcacacaagacctccatcaccagcttgcgcttccag
agctcccagagcagacacctaaagtccagtaaaatggcatccagcaagtcttccagcgct
cacacaagcaagaggatctcagccaggctgggtaatacctacttaccaacagccacccac
agctccacctctgcacccccctctagcctgcttgcaccccacacggtagatggaggggat
ggacaggcacagggcacaggctccagtgtggaagtggtctccagagaggcggagggccag
cctggtgctgaccgcctgcccagtctggacaagttcagtagcgtgggtagaaacagcctg
gacatcttctcccccgtaagagacgattacaaagcccatgggatgggtggtgatgctcct
ggtggaatcaaagggaatgggaccagtttggatatgttctccagagaaggagaagggcaa
aacagcacggagaagttcagcaaagtgggacgcaacagtctggacattttctctccagtc
agagaggattacaaatcccatggaatgactgcagatgtaacaagtgggaagaaaggaaac
aatctggacttcctcccttcctactctggtggacccccacaccgcaagactccactgggc
acacctggaggagggcgctgttacagccccctgtctgtcttccagacccctcaaccaatc
aaagaggaggaggccgagcctccagcgcagacagacacacgggacttgaaaaggtatgag
aagggtggtggttccagtctggagggtgaaggccccaccccacacagccgaccagcacag
ctgttcttcacccctgaacccagcctgagggccaatgacatgcaggcccaactgcgctac
aacacacccctcaatggtggtccgcccactactgcaccagcaggccctgcagtttcttca
gtggtagcatcctctgtatcagagagaatagtggaggctgttggagcagagggtggaggc
gctcccctcacatcactgcagattcagttcatccgcaacatgatccacgagaccctggaa
gacttcagggacgcctgccaccgagacatagtgaacctccaggtggagatggtcaaacag
ttctacattcagctgaacgagatccatggtctgatcgagaagtactcggtcaacgacacg
ctggtggaggagatcgagaagttgagggaggagaacaaacgactccgagccaattactga
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