Oncorhynchus mykiss (rainbow trout): 110497631
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Entry
110497631 CDS
T07259
Symbol
cdan1
Name
(RefSeq) codanin-1
KO
K19531
codanin-1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omy03036
]
110497631 (cdan1)
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
110497631 (cdan1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Codanin-1_C
SPATA2_PUB-like
VMAP-M8
Motif
Other DBs
NCBI-GeneID:
110497631
NCBI-ProteinID:
XP_021429543
Ensembl:
ENSOMYG00000031732
LinkDB
All DBs
Position
19:28796261..28816106
Genome browser
AA seq
1418 aa
AA seq
DB search
MLSCFWSAPQGNAVATFARLLPFWYAPNSKQQAECQTAPAQTRMAALLESLLQKEVEAIK
AVEWLKHDGDSDSLAWCKPLKIERQEFVPFLLNFLREQSCSTLTHGPATPAKTPSHPRVS
QPSQQGPGFSSEHRGDCRSTGPGTGPRSASRVQLFSSTPSLSPGAEWDTTQPPSGSHCLG
GISALSSPSFSSARSPAPSSTSRHTPSERRSTQRASLGDFMPSPPELQHHHSLSLGVQQQ
PRGRRRSAGMGGQGRQGGGRGVFQTDEVGPGRSEGGGRKGRGGGANKMGDPAVSPPMAQM
TTLVQLNLTNLEDFPPMGMSHASPALHTKPSRRINPTPVSAERPHSRPKTCFTSTPFSTR
PSSPSPVPEAVTGAIEGSITGALNVGSPPLSLQEERELLKKVKCKRAQQGSPLPTSLDPC
TPTKPGLRPVSGSKITPVTLGLNPDPSKVTLTSELDLLADLYCTCISENLVPNVFLELFF
VLQLLTSRTPAVTEEEDKDLSMGTLDVLERGYLSKVHNCVYFSVRVLENQFELVSHLDKD
TLRLLAENERVTCFSPSLRNRLTLAQDSSTAKVSPSVDTFIHSVPFQPATDNRSNFSSDK
AFHTFKKQRDIFYEVLREWEDFHKEPRWEFEAELGSRVRGMVSQLNSTGNHSHFARLFLK
QLVQMCKGPRALGSPGDTPDADLLGMLGADSLGRLKRLEERLIQPQGILGPCPPPAFPGH
QEFFRDFLKTASCCQLNQHLKDSLCQQLLQLDEVSVLAPVVSSAEGDMEQQDEKQRFSSV
LLLARLLAKFLGYISFLPYQTSERPSREIQEATANLRSKSMSVLDVCAVLRSCVRRRRTI
LTVPWLVEFLSMLDFTGPFLLCYRTVLGLLLSLYRRMVLSREGEVCYLNQLLMVAVLGWL
FQIPVIPEELFFTTDFAVAVELEESQTNVQGLDCLPLVDQQLLYTCCPFLGEFRKLLAAF
VAGSSARGGGLIRKITPTSAELRGTPTTTRSQQKLQVDLEQAFFHNQPPSLRRTVEFVAE
RVGSNCVKHMKVTLVCELVRGGERLLREGLISPGANPLILNDSICAQLCDGGQEALERAT
RFCSEKGPEAIRVLLPDETSPAVLTTSENITKRLATEKAYSWLSSNITALVKREWKTTFD
RVMKSLPSPEASGVEGSGLVAKAGAGTAAVSQEQSRTPKRDMGKEEAVTSCPPDCPHSAP
LPSDVLVEIKEVLSIAVGPRSEKEALTCLQLNALLGKVGDTLSCKKFSFPMPEQMLIRCT
VLLACKLVSGELPMVSPQEECDRTVSPDPVLPDSPVQRVGCSIKVLLEQLILLWGRDCCS
SAPLHLLFTEMTLSAVLMASDSQWDNFLFLVRQLVEREILGEEEVVSHWRKLSQLPWPTE
FIEKIQQQSSSTTSLPLPELQNHMDMLQVSPQPVEGAN
NT seq
4257 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcctgtttctggagcgcgccccagggcaatgcagtagcgacattcgcgcgcctg
ctcccattctggtacgcccccaactccaagcagcaggcagagtgccagacggcgcctgct
cagaccagaatggcggctcttttggaatcgctgctgcagaaggaagtggaagctatcaag
gccgtagaatggttaaaacacgacggggacagtgacagcttggcatggtgtaagccactg
aagatcgaaagacaggagtttgttcctttcctgttgaacttcctgcgagagcagagctgc
tccaccctcacccatggccctgccacacccgccaagacccccagccaccccagggtctcc
cagccctctcagcaggggccaggcttctccagtgagcataggggggactgcagatctacc
ggacctggaaccggtcctcgtagtgccagccgtgtacagctattctcctccactccctcc
ctgtctcctggggctgagtgggatactacccaacccccatctggctcccactgcctgggt
gggatcagtgccctcagtagtccttccttcagctcagccaggagccctgctccatcctcc
acctccaggcacactccctcagagcgccgctccacccagagagccagtttgggggatttc
atgccgtcacctccagagctccagcaccaccacagtctcagcctgggggtccagcagcag
ccgcgtggccgcaggaggagtgctgggatgggagggcagggaaggcagggtggggggcgt
ggtgtgttccagactgacgaggtggggccaggaagatctgagggtggtgggaggaaggga
aggggaggaggggctaataaaatgggtgacccagctgtgtcacctccaatggctcagatg
acaactctggtccagctcaacttaaccaatctggaagacttcccacctatggggatgtcg
catgcatcaccagcactgcatacaaaaccatctcggaggatcaacccaaccccagtcagt
gcagagcggcctcactccagaccgaagacctgtttcacttccacccccttcagcaccagg
ccctccagcccttccccagtccccgaggcagtcactggggccatcgaagggagcatcact
ggggccctgaacgtgggcagcccccctctcagtctgcaggaggagagagaactgctaaag
aaagtgaagtgtaaacgagcccagcagggctcccctttacccacctctttggacccctgt
acccctaccaaaccagggctccggccagtatcaggctccaaaattacccctgtcaccctg
ggtttgaatcctgacccctctaaagtcaccttgacctctgaactggaccttctggctgac
ctctactgcacctgcatctctgagaacctagttcccaacgtgttcctggaactgttcttt
gtgctgcagcttctgacatctagaacaccagccgtcacagaggaagaggacaaggatcta
agtatggggacgttagatgtcctggaaagaggctatctcagcaaggtgcacaactgtgtc
tacttctctgtcagggtgctggagaatcagtttgagttggtgtctcacctggacaaagac
accctgcgtctcttggctgagaacgagagggtgacctgcttctctccgtccctgaggaac
agactgactctggcccaggactccagcacagccaaggtctcgccctctgtggacaccttc
atccactctgtcccgttccagcctgccactgacaaccgctccaacttcagcagtgacaag
gccttccacaccttcaagaagcagagggatattttctacgaggtgctgcgagagtgggaa
gacttccacaaggaacctagatgggagtttgaagctgaattaggcagtagggtcagagga
atggtgagtcaactgaactccactggaaaccactctcatttcgccagactcttcctcaag
cagttggtgcagatgtgcaaaggtccccgtgctttgggctccccgggcgacacccccgac
gcggacctactaggcatgctgggagcagacagcctggggcgtctaaagcgtctggaggag
cgtctgatccagccccaaggcattctgggaccctgtcctccacccgccttcccgggacac
caggagttcttcagggacttcttaaagaccgcaagctgctgccagctgaaccagcacctg
aaggacagtctgtgtcagcagctcctccagcttgacgaggtgtctgtcctggctcccgtg
gtctccagtgccgagggagacatggaacaacaagatgagaagcagcgtttctcctctgtc
ctgctgttggctcgtctcctagctaagttcctgggttatatctccttcctgccataccag
acctctgagaggccctccagggagatacaggaggctactgccaacctccgcagcaagagt
atgtctgtgctggatgtgtgtgcggtcctgcgtagctgtgttcgtaggagacggaccatc
ctgactgtgccctggctggtggagttcctctccatgctggacttcaccggtcccttcctc
ctctgctacaggaccgttctgggactgctgctcagcctatacaggcggatggtgctgtcc
agagaaggagaggtgtgttacctgaatcagcttctcatggtggctgttctaggctggctg
ttccagatcccagtgatcccggaggagcttttcttcactactgatttcgctgtagctgtc
gagctagaggagagccagaccaacgtccagggacttgactgtctccccctggtggaccaa
cagctcctctacacctgctgtcctttcctgggtgagttccgtaagctcctcgctgccttt
gtggccggtagctctgccaggggtggaggcctcatccgtaagatcacccctacctctgct
gagctaagaggtacccccaccaccaccaggtcacagcaaaaactacaggtggatttggag
caagccttcttccataaccagcctccatctctcagacgaacggtggagtttgtagctgag
agggtgggatccaactgtgtcaaacatatgaaggtcacgctggtgtgtgagctggtccgt
ggtggagagaggttgctgagggaggggctgatctcaccaggggccaaccctctgatactc
aacgactccatctgtgctcaactctgtgacgggggccaggaggctctagagagagctacc
aggttttgcagtgagaagggtccagaagccatccgggttcttcttcctgacgagacgtct
cccgctgttctcactacgtctgagaacatcaccaagcgcctggccactgagaaggcctat
agctggctctcctccaacatcacagccctggtcaagcgagagtggaaaacaacgtttgac
cgtgtgatgaagtctcttcccagcccagaggctagtggtgtggaaggttctggtcttgtg
gctaaagctggagctggaactgcagcagtctcccaggagcagtcacgtaccccaaaacgg
gacatgggcaaggaggaggctgtgacgtcctgccctccagactgcccccacagtgcacca
ctaccatctgatgtcctggtagagattaaggaggtgttgagtattgcagtaggtccgagg
tctgaaaaggaggcgttgacttgtctacagctgaacgctctactgggaaaagtaggagac
acactgagctgcaaaaagttctcattcccaatgcctgaacagatgctgatacgttgcacc
gtcctactagcctgtaaactagtttcaggggagctgcccatggtgtccccacaggaggaa
tgtgataggacagtgtctcctgatccagtattaccagactcaccagtccaaagggtaggc
tgttcaatcaaagtcctgctggagcagttgatcctcctgtgggggagagactgttgttca
tcagcccccctccacctgctcttcacagaaatgacactcagtgctgtcctcatggccagc
gactcacagtgggacaactttctgttcctggtcagacagctggtagagcgggagattctg
ggagaagaagaagtggtctctcattggaggaagctgtcacagttaccctggccaacggaa
ttcatagagaagatccagcagcagtcctcttccaccacatcccttcctctgcctgagctt
cagaaccacatggacatgttgcaggtctcaccacaacctgtagagggagccaactaa
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