Oncorhynchus mykiss (rainbow trout): 110497632
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Entry
110497632 CDS
T07259
Name
(RefSeq) synaptosomal-associated protein 23 isoform X1
KO
K08508
synaptosomal-associated protein 23
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
110497632
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110497632
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
omy04147
]
110497632
Membrane trafficking [BR:
omy04131
]
SNARE
SNAP-25 (Qb,c)
SNAP-23
110497632
Exosome [BR:
omy04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
110497632
Exosomal proteins of other body fluids (saliva and urine)
110497632
Exosomal proteins of colorectal cancer cells
110497632
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNAP-25
DUF5089
V-SNARE_C
COG6_N
Use1
Exonuc_VII_L
Sec20
CDK5RAP3
RmuC
Motif
Other DBs
NCBI-GeneID:
110497632
NCBI-ProteinID:
XP_021429546
Ensembl:
ENSOMYG00000031831
LinkDB
All DBs
Position
19:complement(28935079..28957730)
Genome browser
AA seq
244 aa
AA seq
DB search
MEWNGGKMNRPQSVELGVSGGTSNFDSSKMADMSVEEITMRANQVTDESLESTRRMLQMA
EESRQTGVNTIEMLDQQGEQLKRTEEGMDQINQDMRQAEKNLTDLSKCCGLCVCPCDRVT
SIEHDSKYKRTWGMGDGGSAGGGEGVDSSVVSTQPAGIRNGQANQQQSTGGPYVKRITND
AREDEMEENLDQVGSIIGNLKNMAMDMGSEIDKQNKHIDRITDKADMNKARIDEANQRAN
KLIK
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atggagtggaacggtggaaagatgaataggcctcagagtgtagagcttggtgtgtcagga
ggaacctccaactttgacagcagcaaaatggcagacatgtcagtggaagagatcaccatg
agggccaaccaagtgaccgatgagtccttggagagcaccaggcggatgctacagatggct
gaggagagcaggcagactggtgtcaataccattgaaatgctggaccaacagggggagcaa
ctgaagcgtacggaggagggtatggaccagatcaaccaggatatgagacaggctgagaag
aacctgactgacctgtccaagtgctgtggcctctgtgtctgcccctgtgacagggtaacg
tccatagagcatgactctaagtacaagcgtacctggggaatgggtgatggtggcagtgca
ggtggaggagagggagtggacagctcggtggtgtccactcaaccagcaggcatccgtaat
ggacaggccaaccagcagcagtccacggggggaccttacgtcaagaggataaccaacgat
gctcgggaggatgagatggaggagaatctggaccaggtgggcagcatcataggcaacctg
aagaacatggccatggacatgggctctgagatagacaagcagaacaaacatatcgaccgc
atcacagataaggcggacatgaacaaagcacgtatcgacgaagccaaccagcgagctaac
aagctcatcaagtag
DBGET
integrated database retrieval system
