Oncorhynchus mykiss (rainbow trout): 110497642
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Entry
110497642 CDS
T07259
Name
(RefSeq) nesprin-3 isoform X1
KO
K21761
nesprin-3
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
110497642
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omy03036
]
110497642
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Centrosome formation proteins
LINC complex
110497642
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin_SYNE1_2
KASH
SYNE3
NBAS_11th
C2
Spectrin_SYNE1
Motif
Other DBs
NCBI-GeneID:
110497642
NCBI-ProteinID:
XP_021429561
LinkDB
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Position
19:29852357..29898442
Genome browser
AA seq
1310 aa
AA seq
DB search
MTEQEQQEFIDSLEAVQSWIHVVQERLRVNDNTQGPRAALQARLRETEKIHESEHEGRVK
MDMVLVAAEVLLQNGDQETRSKTHTKLKELKASWEETCTFIIHCHSRIEWVWLHWSEYLK
AHEEVEMWLVRMRRSLEPEVELQLGVKEKLWQVDHQHVLLSDVQSQALLLERLLDEAAAL
HNRTQDPSVDQEAQERLQEAYNSIRDRAEERLSVLQKIAEEHQIYQSYVLKFQAWLVSKA
KELNTLTESEDTAENNLQALQTLDDSVASEERTLQHIEGMVEAVRANTSPGGVEVVEEEV
EELRLAWQRLRQSLCEAGEGLRISLDSQSQYQSHCQRLGEDIAQLQALLHRLTRDLETAR
EGDRSEEQMVGQWRKYMNVRNTLSAEESQVENLKAQLKELFRFSQDSRHLSDDVLAVVKE
HQSVKCRAMKLCVESETGLRQVLQDPLHGFSQWSQLVSQVLEASAEVSEFSHIALLVQNI
ERLMMQSLQLQERLSLLQVKRDLLVSVFGSDRAESLLTELNAAVKNRELLHSQLLQRKGR
LQGLISRTKDFGDAYESIRSKLTLLRDRLISADILQPDILAKKSQSDQLRGIKKDLEDCE
AHITALETLVSSSSTNKTRSERLYGDWRNLYKAVRVKGNESEESIREHESFHESLLNVEK
WLMIMRQKLESYRSSAGEWSVDNRQHEAERALGEFPEKELQLHQTEVEGQGVLKRTSEEG
RVHILRDMKRLRESWMALHDLSLNLFRLLNGHSSSEDHDLDIQRVRGQAGELTGPARELF
PGEGGDLIKGRGSSSRMEGAPQGSPGEDHGVWVSQCYGSGSGRGGRTGSGARMEQSEGAS
FRAEEGVWVEGGFESSVEDMDLSEHGERQGSGQQGPMALSQGSSQRPGQGSGVESSGNCR
EKGGGEHSFGVEEVDSIAWRGGYGQGGEGETRGGTTGINSSGHTGGRNPQCGVVGGSGSR
SSGVVGGSGSRSSGVVGGSGSRSSGVVGGSDFTGSSVMEGSGSRSSGVVVVGASGSSSSG
RTEEWVDEQRSRGVAEPVAMEVDVGLGQGHSQGSRSSYREGTSEMGDQSGSGGRHPRHRG
SFTLIKTKMEDPVMDQGFARKTSGGLQSSSQHTTADPGSALSAAEYEDRRRIFEAWLQKE
NDTLSGILNTKGLLSTRELKIRQKTLKTLRSSLGWGQEQFQLLLMSGAAASGSGVGADHW
AEDVGMEEIRYRWMLYKSKLKDVGDLKALLNVKGASAAGQEEHTRIAKGKTPGLLYRVCR
VALPLWLLLLALLLFAFFLPWMDEGSSCSLSNNFARSFNIMLRYDGPPPT
NT seq
3933 nt
NT seq
+upstream
nt +downstream
nt
atgactgagcaggagcagcaggagtttattgatagcctggaggcagttcagtcctggata
catgtcgttcaggagaggctccgggtcaatgacaacacccagggcccccgagcagccctg
caggccaggctcagagagacagagaaaatccacgagtctgagcatgagggtcgcgtgaag
atggacatggtgctggtggctgctgaggtcttactgcagaacggagaccaggagaccagg
agcaaaacccacaccaaactcaaagagctcaaagcatcatgggaggagacctgcaccttc
ataatccactgccacagccggatagagtgggtgtggctgcactggagtgagtacctgaag
gcgcacgaggaggttgagatgtggctggtccgcatgcgtcgcagtctggagccggaggtg
gaactacagctgggggtgaaggagaaactgtggcaggtggaccaccagcatgtcttgctg
agtgacgtgcagagccaggcactgctgttggagaggctgttggatgaggctgcagcgctg
cacaaccgtacccaggaccccagtgtggaccaggaggcacaggagagactgcaagaggca
tacaacagcatacgggacagggctgaggagaggctgtcagtgctgcagaagatagctgaa
gagcaccagatttaccagagctacgtcctaaagttccaggcctggctggtgtccaaagct
aaggagctgaacacacttactgagtcagaggacacagccgagaacaatctccaagcccta
cagacgctggacgacagtgtggccagtgaggagcggacgctgcagcacatcgagggcatg
gtggaggcagtgcgggccaacacgtcgcccgggggggtggaggtggtggaggaggaggtg
gaagagcttcgtctggcctggcagaggctccgacagagcctgtgtgaggctggggagggc
ctaaggatcagcctagactcccagagccagtaccagagccactgccagcgcctgggggag
gacatagcgcagctccaggccctgcttcacagactgaccagagacctggagacagccagg
gagggagacaggagcgaggaacagatggttgggcagtggaggaagtacatgaatgttcgg
aatactctgtcggcagaggaatcccaggtggagaacctcaaggcccagcttaaagaactc
ttccgcttttcccaagattcccggcatctctctgacgacgtcctggctgtggtgaaggag
caccagagtgtgaagtgtcgcgcaatgaagctatgtgtggagtcagagaccgggctgaga
caggtgctgcaggaccctctgcatggcttctctcagtggagccagctggtctctcaggtg
ctggaggcctcagcagaggtgtctgagttctcccacatcgccttgctagtgcagaacatc
gagaggttgatgatgcaaagtctacagctgcaagagcggttgagtctgctgcaggtgaag
agggatctgctggtttcagtgtttggctctgacagagcagagagtctactgacggaactc
aacgccgccgtgaagaaccgagagctactgcacagccagcttctgcagaggaagggaaga
ctgcagggtttgatctcgaggacgaaggactttggcgacgcctacgagtcaatcaggagc
aagctgaccctcctgagagacagactaatctcagcagacatcctccaaccagacatactg
gccaagaagagccagtcagaccagctacgggggatcaagaaggacttggaggactgtgag
gcccacatcacagctctggagactctggtgtcatccagctccactaacaagacccggtct
gagagactgtatggggactggaggaacctatacaaggcagtccgggtgaaggggaacgag
agtgaggagagcatcagggagcacgagagtttccatgagagcctgctgaatgtagagaag
tggctgatgattatgaggcagaagctggagtcctaccgcagttctgctggggagtggagc
gtggacaacagacagcatgaagctgagagggcactaggtgagttcccagagaaggagctg
cagctgcaccagacagaggtggagggccagggggtgctgaagaggacctctgaggaggga
cgagtacacatcctcagggacatgaagcgcctgagagagtcctggatggccctgcatgac
ctcagcctcaacctcttcaggctgctgaatgggcacagctcctctgaggaccatgactta
gacatccagagggtgagaggtcaggctggggagttgacaggcccagctagggagctcttc
cctggggagggaggagacctgatcaaaggaagaggctccagcagcaggatggagggtgct
ccacagggatccccaggagaggaccacggtgtctgggtctctcagtgctatggatcaggg
tctgggagagggggaagaacagggtcaggggcaaggatggagcaaagcgaaggggcaagt
tttagagcagaagagggtgtgtgggtcgagggagggttcgagagcagtgtggaggatatg
gatctctctgaacatggggagagacagggcagtggtcaacagggtccaatggcgttaagc
caaggaagcagtcagagaccgggacagggcagtggggttgaaagcagtggcaattgcagg
gagaagggtggcggtgagcacagttttggtgttgaggaggtggactccattgcctggaga
ggggggtatggtcagggaggagagggggagaccagagggggaaccacagggataaactcc
tcaggccacacaggaggcagaaacccccagtgtggagtggtggggggctctgggtccagg
agtagcggagtggtggggggctctgggtccaggagtagcggagtggtggggggctctggg
tccaggagtagcggagtggtggggggttctgattttacaggtagcagcgtgatggaggga
tcaggctctaggagtagcggagtggtggtagtcggggcgtctgggtccagcagtagcggg
cggacagaggagtgggtggatgagcagaggtccagaggtgtggctgaacctgtggccatg
gaggtagatgtggggttagggcaaggtcatagtcagggcagcagaagcagctatagagag
ggaacaagtgaaatgggagaccagagtggaagtggagggcgacacccgcgacacagaggg
tccttcaccctgatcaagacaaagatggaggatccagtcatggaccaaggctttgctaga
aaaacttctggagggctacagagctcaagtcaacacaccacggcagatccagggtcagct
ctgagtgcagcggagtacgaggacaggaggaggatttttgaggcctggctacagaaggaa
aacgatactctttcagggattctcaacaccaagggactgctgagcaccagagaactcaag
atcaggcagaaaacactcaagactttgcggtccagtctgggctggggtcaggagcagttc
cagctactgctgatgtctggggcggctgcatccggatccggggtcggggctgaccattgg
gctgaggatgtgggtatggaggagatacgttatcgctggatgctctacaagtccaaactg
aaggatgtaggagacctcaaggctctgttgaatgtcaagggtgcaagtgctgctggacag
gaggaacacaccaggatagctaaggggaagactccaggcctgctgtaccgtgtgtgtcgg
gtggccctgcccctctggctcctgctgttggccttactcctcttcgccttcttcctgccc
tggatggacgaaggctccagctgctctctgtccaacaactttgcccgctccttcaacatc
atgctacgctacgacggacctccacccacatag
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