Oncorhynchus mykiss (rainbow trout): 110497664
Help
Entry
110497664 CDS
T07259
Symbol
tbpl2
Name
(RefSeq) TATA box-binding protein-like 2
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110497664 (tbpl2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110497664 (tbpl2)
03021 Transcription machinery [BR:
omy03021
]
110497664 (tbpl2)
Transcription factors [BR:
omy03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
110497664 (tbpl2)
Transcription machinery [BR:
omy03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
110497664 (tbpl2)
RNA polymerase III system
TFIIIB
110497664 (tbpl2)
RNA polymerase I system
SL1/TIF-1B
110497664 (tbpl2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
Motif
Other DBs
NCBI-GeneID:
110497664
NCBI-ProteinID:
XP_021429604
Ensembl:
ENSOMYG00000036367
LinkDB
All DBs
Position
19:31994372..31999848
Genome browser
AA seq
276 aa
AA seq
DB search
MDEDSALNDPIANVPGPSYLSSLSQPEKDVGKDLDLSFLPEETSGNDASNANVTQDSGVF
DACRQEESAETDPKKVAMPGASTFCPMTPVTPVAESSGIIPMLQNIVSTVNLACPLDLKS
IALQARNAEYNPKRFDAVIMRILEPRTTALIFSSGKMVCTGAKSEELCHLAARKFARVVQ
KLGFPAKFLDFKIHNMVGSCDVCFPIRLEGLLLDHQQFSSYVPELFPGLIYRMVKPRIVL
MIFVSGKVVLTGAKERREIYEAFENIYPILKGFRKQ
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagattcagcattgaatgacccaattgcaaatgtaccaggcccatcctacctc
tcctccttgagccaaccggagaaggacgtcgggaaagatctggatctcagcttcctgccg
gaagagaccagtggaaatgatgcttctaatgctaacgtgacacaagacagtggcgtcttc
gatgcctgtaggcaagaggagtctgctgagactgaccctaaaaaggtggccatgccggga
gcctctaccttctgtcccatgacacccgtgaccccagtggctgagagttctggaatcatc
cccatgttacagaatattgtatccacagtgaatctggcctgcccactggacctgaagtcc
attgctctacaagccagaaatgcggagtacaaccccaagcgttttgacgctgtcattatg
agaatactggagcctaggaccacagcgctcatcttcagctctggaaagatggtctgcaca
ggagccaagagtgaggagctgtgtcacttagctgcccgcaagtttgctcgagtggtgcag
aagctgggctttcctgccaaattcctagacttcaagatacataacatggtggggagctgt
gatgtctgcttccccatccgactggagggtctgttgctggatcatcagcagttcagcagt
tatgtgccagaactgtttcctggattgatctatcgcatggtgaaaccacgtattgtgtta
atgatctttgtgtctggaaaagtggtcctgacaggagctaaagaacgtcgagaaatctat
gaagcctttgagaacatataccccattctgaagggattcagaaagcaatga
DBGET
integrated database retrieval system