Oncorhynchus mykiss (rainbow trout): 110497671
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Entry
110497671 CDS
T07259
Symbol
irf2bpl
Name
(RefSeq) probable E3 ubiquitin-protein ligase IRF2BPL
KO
K22383
interferon regulatory factor 2-binding protein
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110497671 (irf2bpl)
04121 Ubiquitin system [BR:
omy04121
]
110497671 (irf2bpl)
Transcription factors [BR:
omy03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
110497671 (irf2bpl)
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
Atypical E3
110497671 (irf2bpl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-2BP1_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
110497671
NCBI-ProteinID:
XP_021429616
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All DBs
Position
19:complement(32345908..32349044)
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AA seq
669 aa
AA seq
DB search
MSSAQVSSSRRQSCYLCDLPRMPWAMIWDFTEAVCRGCVNYEGADRIEFVIETARHLKRA
HGFQGGRSPGPPPPPTVKTQSAISAKETVQISHVDGPSKQQQSGMDRYSLSAERPRFDYS
SIGAHASRLPNGMSGPNGFPKPDDGPPELNRQSPNSRRSHGLAAVPGQMNVPPNLLPQTM
LNGPSSATAIAPHSLSSRPPPPSIVGPSLSMAAQSMSEQGKRPGSVSSTDQERDLKEKQR
NAEALAELSESLRNRNEDWGNKPKIVRDTLVTLSNSSPFDVRFKKDHSLVGRVFAFDAVS
KPGMDYELKIFVEYPSGSGNIFSSASGVAKQMYQDCMKDFGRGLSSGFKYLEYEKKHGSG
DWRLLGDLLPESVRFFKEGLGVEMLPQPYIDASCPLLPTALVNIPRALPSTSAPRTGVRK
RKASPEPDSVESALKLSEQEQQRQQWMASQSEALKLTMASGSFGASHGGPPPLGPGHSVH
SSRATPPESAPQNGQSPMAALMSVADTLGNAHSPKDNNSVHSTTSTRHNNSSPVSPASVS
GQRRLASRNGELNLAGTPSQSNAHSGMDQVHAQNIPDSPMANNGPLCCTICHERLEDTHF
VQCPSVPNHKFCFPCSRESIKAQGATGEVYCPSGEKCPLVGSNVPWAFMQGEIATILAGD
VKVKKERDP
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgcacaagtatcgtcatctcggagacagtcatgttacctgtgcgatttaccc
cgtatgccgtgggctatgatatgggattttacggaggcagtgtgcaggggttgtgtgaat
tatgaaggtgcggatcggatcgagtttgttatcgaaactgcacgccacctcaaacgagct
catggtttccaaggggggagatcccccggtccaccaccgccgcccacagtaaaaacacag
tcggcaatatcagccaaggagacggtgcaaatcagccatgtggatggaccctctaaacaa
caacagtcggggatggaccgctactctctgagtgcggaaagacctcgctttgactactcc
agtattggcgcccatgccagcagacttcccaatggaatgagcggtccaaatgggttcccc
aaaccggacgatggtcccccagaactgaaccgacagagcccgaactcccgtcggagccac
ggtctcgctgcggtcccaggacaaatgaacgttccccccaaccttctcccacagaccatg
ttgaatggaccctcctcggcaacagccatagccccgcatagcctgtccagccgcccccct
cccccatccattgtgggaccctctttgtccatggccgctcagtccatgtcagaacaaggt
aaacgaccaggttctgtgtcgagcactgaccaagagagagatctgaaagagaaacagcgt
aacgcagaggctttggctgagctcagtgaaagtttaaggaacagaaacgaagactgggga
aacaaacccaaaatagtaagggacactttggttactctttcgaacagctccccgtttgat
gtgagatttaaaaaggatcattcactcgtgggtagggtgtttgctttcgatgcagtgtca
aagcctggaatggactatgaattgaaaatatttgtcgagtacccaagtggatctggtaat
atattttccagcgcatcaggggtggccaaacaaatgtatcaggactgcatgaaagacttt
ggcagagggctttcctcgggctttaaatatttggagtatgagaaaaagcatggttcgggg
gactggcgactcctgggtgatttgttgcccgaatccgtccgattcttcaaagaggggcta
ggggttgaaatgttgcctcagccctacatcgatgccagctgcccattgctgcccactgct
ttggtcaacatccctcgtgccttgccatctacgagtgcaccgaggactggcgtacgtaag
cgtaaagcctccccagaacctgactctgtagagagcgcgctgaaactatctgaacaagaa
cagcagaggcagcagtggatggccagccagagcgaggcgttaaaactgaccatggcatcc
ggatcattcggtgcctcacacgggggacctccgccgcttggccctggccattctgttcac
tcaagtcgcgccacaccccctgaatctgcgccccagaatggacagtctccaatggccgcg
ctcatgtctgtcgcggacacgttgggcaatgcgcactctccgaaggacaacaactctgtt
cactctacaacatccaccaggcataacaacagcagcccagtctccccagcctctgtttct
gggcagaggcgtttggcttcccgtaacggagagctcaatctggccgggactccctctcag
tccaatgcgcattctggcatggatcaggtccacgcgcaaaacattccagattctcccatg
gcaaacaacggacctctgtgttgtaccatttgccacgaacgtttagaggatacccatttc
gttcagtgtccgtcagttcccaaccataaattctgtttcccttgttctcgagagagcatc
aaagcgcagggagcaactggcgaggtgtattgtcctagcggagagaaatgccccctggta
ggttctaatgtgccttgggcgttcatgcaaggtgagatagcaacaatattagccggggac
gttaaggtaaaaaaggagagagacccatag
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