Oncorhynchus mykiss (rainbow trout): 110497684
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Entry
110497684 CDS
T07259
Name
(RefSeq) sorting nexin-6 isoform X1
KO
K17920
sorting nexin-5/6/32
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
110497684
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110497684
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
omy04990
]
110497684
Membrane trafficking [BR:
omy04131
]
Endocytosis
Macropinocytosis
Sorting nexins
110497684
Domain-containing proteins not elsewhere classified [BR:
omy04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
110497684
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps5
PX
FAN1_HTH
AceES-2
Motif
Other DBs
NCBI-GeneID:
110497684
NCBI-ProteinID:
XP_036810562
Ensembl:
ENSOMYG00000037313
LinkDB
All DBs
Position
19:32699240..32715684
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AA seq
407 aa
AA seq
DB search
MMQEGLDDGPDFLSEEDRGPRAVNVDLQTDATLQVDISDALSERDKVKFTVHTKSTLPNF
KQNEFSVVRQHEEFIWLHDSFVENEEYAGYIIPPAPPRPDFDASREKLQKLGEGEGSMTK
EEFTKMKQELEAEYLAIFKKTVAMHEVFLCRVAAHPVLRKDMNFHVFLEYNQDLSVRGKN
KREKMEDFFKNVVKSADGVLVAGVKDVDDFFEHEKTFLLEYHNRVKDASSKSDRMIRSHK
SAADDINRIASTLYTLGTQDSTDVCKFFLKVSELFEKTRKIEARVAADEDLKLADLLKYY
LRESQAAKDLLYRRGRALVDYENANKALDKARAKNKDVLQAETSQQVCCQKFEKISESAK
QELIDFKTRRVAAFRKNLVELAELELKHAKGNLQLLQSCVGVLKGDT
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaagaagggctggacgatggtcccgatttcctctccgaggaggacagaggacct
agggcagtcaatgttgaccttcaaactgatgcaacacttcaagtggacatttctgatgcg
ttgagtgagcgggacaaggttaagtttactgtccatactaagagcactcttcctaacttc
aagcagaatgagttttcagtggtgaggcagcatgaggagttcatctggctccatgactca
ttcgtggagaatgaggagtatgcaggctacattattccccctgccccaccaagacctgac
ttcgatgcctccagggagaagttacagaaactgggggaaggtgaaggttccatgaccaag
gaagagttcaccaaaatgaaacaggaacttgaagccgaatacttggctatcttcaagaag
accgtggcgatgcatgaagtgtttctttgccgtgtggctgcccatcctgtcttaaggaaa
gacatgaacttccatgtctttttagagtacaaccaagacctgagtgtccgaggcaaaaac
aagagggagaagatggaagatttcttcaagaatgtggtgaagtcagcagacggcgtgtta
gtggcaggggtgaaggatgtagatgatttctttgagcatgagaagacattccttttagag
taccataatcgtgtcaaagatgcctcctccaaatctgatagaatgatcaggtctcacaaa
agtgctgcagatgatatcaatagaatcgcctccacactgtacactttaggaacccaggac
tccacagatgtgtgcaaatttttcttgaaagtctctgagctgtttgagaaaacacggaaa
atagaggctcgagtggctgcagatgaggacctgaaacttgccgacttactgaagtattat
ctcagggagtcacaagctgctaaggatctattgtatagacgagggagggccctggtagat
tacgagaatgcaaacaaagctctggacaaagccagggcaaagaacaaagatgtgcttcag
gcagagaccagccagcaggtgtgctgtcagaagtttgagaaaatctcagagtccgcaaag
caagagcttatagacttcaagacgagacgagtagcagccttcagaaagaacttggtggaa
cttgccgaactggaactcaaacatgctaagggtaatttacaattattgcaaagctgtgtc
ggggtcctcaaaggagacacttag
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