Oncorhynchus mykiss (rainbow trout): 110497688
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Entry
110497688 CDS
T07259
Name
(RefSeq) neuronal PAS domain-containing protein 3 isoform X1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110497688
Transcription factors [BR:
omy03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
110497688
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS
PAS_11
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
110497688
NCBI-ProteinID:
XP_036810565
LinkDB
All DBs
Position
19:complement(32770921..33161896)
Genome browser
AA seq
1031 aa
AA seq
DB search
MIRIFPDFSVQVTAAGGGAGGMPSGPAVGRIPGTTNGNPQNVQGITSYQQREIKTLHPFC
MEGSEEEAIVDAQFMSKFPHDPYWERPANASSCSASRPKTLHLGGGQQHTSSPWLQALRK
EKSRDAARSRRGKENFEFYELAKMLPLPGAITSQLDKASIIRLTISYLKMRDFANQGDPP
WNLRIEGPPPNTSVKAIGVQRRRTPSAVASEIFEPHLGSHILQSLDGFVFALNKEGRFLY
ISETVSIYLGLSQVELTGSSVFDYVHPGDHVEMAEQLGMKLPPGRGLLSQGTATEDGASS
ASSSSHAETPEPVESTSPSLLSPDNTLERSFFIRMKSTLTKRGVHIKSSGYKVIHVTGRL
RIRMALTHSRSVPIQIMGMVVVAHALPPPTINEVRIDCQMFVTRVNMDLNIVYCENRISD
YMDLTPVDIVGKRCYQFIHAEDVEGIRHSHLDLINKGQCVTKYYRWIQKNGGYIWIQSSA
TIAINAKNANEKNIIWVNYVLSNPEYKDTPMDIAQLPNLPEKASESSETSDSESESKENS
EDNENSKSDGKGNQTENSEDPETDSKKQQQGQSSSEQEMRRQEEGDSSSNPESQESEDDL
EPSDCELETKERRLGRLGGLHIKVEHYGDRDGRVELHNSPSSSEEEEDDDDDEEDDDDDD
SVKDCDRATEMLAVPAASKQQKRKKRRKKQKWDGSRSRRLRLSSATTSPCNMNHPTLGGD
APLLLPPSPASASVLKIKTEMSEPINFDNDSSIWNYPPNREISRNESPYSMTKHVPTHDT
FPSPQPGSLQVSIPDSVLTPPGTEGGGGGGGGTRKGVPPSFNGNSSAPSSASSVASLAPP
SSSGSSSDPLSPPLSASPRDKQQGQGTPTTSNSSSSLLYTSDLEALQRLQAGNVVLPLVH
RVTGTLATTSTAASRVYTTGTIRYAPADVTLAMQAGANLLPNNVAHAMNFVDVNGSPGFG
IDPKTPMEMLYHHVHRLNMAGPFGGAVSGASLTQMPAANVFTTAEGLFSTLPFPIYSNGI
HTTQTLERKED
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgatcaggatcttcccggatttcagcgttcaggtgacggcggcaggtggaggagccggg
ggaatgccatcaggtcctgcggtggggagaatccccggtaccactaacgggaacccgcag
aacgtccaggggatcacgtcctatcaacaaagggaaattaaaaccctacaccctttctgc
atggagggatcagaggaggaggccatagttgatgcccaattcatgtccaaattcccccac
gacccttactgggagaggcctgctaatgccagctcctgttctgcctctaggcccaagaca
ctccaccttggaggagggcaacaacatacctcatcgccatggttgcaggctctgaggaag
gagaagtcccgggatgcggctcgctcgcggcgagggaaggagaactttgagttctatgag
ctggccaagatgctgcccctgcccggcgccatcaccagccagctggacaaggcttccatc
atccgcctcaccatcagctacctgaagatgagggacttcgccaaccagggggacccgcca
tggaacctgcgcatagaaggcccaccacccaacacctccgtcaaagctataggagtacag
cgaaggaggactcccagtgcagtagcctcagagatcttcgagccacacctcgggagccac
atattgcagtccctggatggatttgtatttgcactaaacaaggaggggaggtttttgtac
atctctgagacggtgtccatatacctgggactttcacaggtggagctgacaggcagcagt
gtgtttgactacgtccaccctggcgaccacgttgagatggcagagcagctgggcatgaag
ctgcctccaggccgaggcctcctctctcagggcactgccacagaggacggcgccagctct
gcctcctcctcctcacacgcagagacccccgagccagttgagtccaccagccccagcctg
ctttccccagacaacactctagagcgctccttcttcatccgtatgaagtccacactgacc
aagagaggtgtccacatcaagtcttcaggctacaaggtgatccatgttacaggcaggctg
agaatccggatggcattgacccacagtcggtctgtacccattcagatcatgggcatggtg
gtggtagcccacgccctcccccctcccaccatcaacgaggtgcgcatagactgccaaatg
tttgtcacccgggtcaacatggacctcaacattgtctactgcgagaatagaattagcgac
tacatggacctgacgccagtggacatcgtagggaagaggtgctaccagttcattcatgcg
gaggatgtggagggtatccggcacagccatttagacttgataaacaagggacagtgtgtg
accaagtactaccgctggatccagaagaacggtgggtacatctggatccagtccagtgcc
accatcgccatcaatgccaagaacgccaatgaaaagaacataatctgggtcaactacgta
ctcagtaatccagagtacaaggacacgcccatggacatcgcccagctgcccaaccttcca
gagaaagcctctgagtcttcagagacttccgactctgagtccgagtccaaggagaactct
gaagacaacgagaactcgaagtcggacgggaaggggaaccagactgagaacagcgaggac
ccggagacagacagtaaaaagcagcagcagggccagtcgtcctcagagcaggagatgagg
cgtcaggaggaaggagacagctcctccaacccagagagccaggagagcgaggatgacctg
gagcccagtgactgcgagctggagaccaaggagaggagactaggccgactggggggcctg
cacatcaaggtggagcactacggagatagagatggaagagtggagctgcacaactcgccg
tcctcctctgaagaagaggaagatgatgacgatgatgaggaggatgatgatgacgacgac
agcgttaaagactgtgacagggccactgagatgctcgccgtccccgccgccagcaagcag
cagaagcgtaagaagaggaggaaaaagcagaagtgggacggtagtcgttctagacgcctg
cgcctctcctctgccaccaccagcccttgcaacatgaaccaccccaccctggggggggac
gcccccctcctgctgcccccctcccctgccagtgcatccgtgctcaagatcaaaacagaa
atgtccgagcccatcaacttcgacaacgacagcagcatctggaactaccctcccaacagg
gagatctccaggaatgagtccccctacagcatgacgaagcacgtcccaacccacgacacc
tttccctccccacagcctggcagtctgcaggtctccatcccagactcagtgctcactcca
ccaggaacagagggaggcggcggcgggggtggaggaaccaggaagggcgtacccccctcc
ttcaacggtaacagcagcgccccctcctcagcctccagtgtggccagcctggcccctccc
tccagctctggctcctcctccgaccccctgtccccacccctctcagcctcgccgcgcgac
aagcagcagggtcagggcacccccaccacctccaactcctcctcctccctgctgtacacc
agcgacctggaggccctgcagaggttgcaggctgggaacgtggtgcttcctctggtccac
cgggtcaccggcaccctcgccacgaccagcactgccgcctcccgggtgtacaccactggc
accatccgctatgcccccgccgacgtcaccttggccatgcaggcaggcgccaacctgttg
cccaacaacgttgcccacgctatgaactttgtggatgtcaacggtagccccggcttcggc
atcgaccccaagacgcccatggagatgctgtatcatcacgtccaccgactcaacatggct
ggcccctttggcggtgccgtgtccggcgccagcctcacccagatgccagcagccaatgta
ttcaccacggcagagggactgttctctactcttccattccctatctacagtaacgggata
cacaccacacaaactctggagcgcaaagaagattag
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