Oncorhynchus mykiss (rainbow trout): 110497722
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Entry
110497722 CDS
T07259
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03013
Nucleocytoplasmic transport
omy03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110497722
03015 mRNA surveillance pathway
110497722
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110497722
03041 Spliceosome [BR:
omy03041
]
110497722
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
110497722
Spliceosome [BR:
omy03041
]
Complex C
Other components
EJC/TREX
110497722
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Aconitase_C
Motif
Other DBs
NCBI-GeneID:
110497722
NCBI-ProteinID:
XP_021429710
Ensembl:
ENSOMYG00000039267
UniProt:
A0A8C7TYE3
LinkDB
All DBs
Position
19:complement(35322742..35327947)
Genome browser
AA seq
692 aa
AA seq
DB search
MAVAVGSLQAQLEKAKESLKNVDDNIRKLTGRDPNELRPGQVRRPTIPGVGGGRGRGINL
LRRGLSDISGGPGGPPVKQRDIEGALLRLAGDQRGRRDSRHDSDAEDDDDVKKPVLQSSV
VATSKERTRRDLIQDQTMDERGKQRNRRMFGLLMGTLQKFKQESNVATDRQKKRIEIEQK
LEVQAEQERKKVEGERRELFEERRAKQTELRLLEQKVELAQLQEEWNVHNTKIVKYIRTK
TKPPIFFLPGRMCSATQKLLDESQKKMNVMFEERREAFAEHLNKMEARPRRQSQRDTALG
KDLKKEDREEGKPMGQVVKVTGNRFDVEMEEEDEATIEEEEGGEGVKHKEDRNKKPEKVE
EQESKGGTKADEMEEAEEDSQDTRIVEFRDVGEQMEGTALVREAEGQARDGDQKMEDSPV
EVGNEKGVEEQQPVKAEKEPLHGRDLTALSDGQEKSIEMQPNEDEEPRTEVATPLLSECN
PHVEVSDVTSMAPEVQIPLLETETDPEPLTTEQSQEADQGAIKQTTNAQPAQAQDDAAAP
KELAPPSKEASRGLKKSKDKKGGGGGRSSSSSSSSSSGSSSSGSSGSSSSGSSSRSSSSS
GSSSSSSSRSRSRGRKDKKRRRRPSERDRERKKAVVERSHKSSKGSGRESKGSKDKSSKS
DRKRTTSEGSRSGKRSSRGDRDRKSDRKEKRR
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggcagtgggatctttgcaagcccagcttgagaaagcgaaagagagtttgaaa
aatgtagacgataatattcgtaaattaactggtcgggatcctaatgaattgagacccggc
caagttagacggccaaccatcccaggtgttggaggaggtagggggcgaggaatcaacttg
ttgaggcgtggactctccgacatcagcggtggaccaggaggacccccagtgaaacagagg
gatattgaaggggccctcctgaggctggccggtgaccagagagggaggagagattcacgc
catgacagcgacgctgaagatgatgacgatgtcaaaaagccagtgttgcagtcatcagta
gtagctacctccaaggagcgtacacgtcgagacctgatccaggatcagaccatggatgag
aggggaaaacaaaggaatcgacgcatgtttggcctgttgatgggaacattacagaaattc
aagcaggaatctaatgtggcaacggataggcaaaagaaacgcattgagattgaacaaaaa
ttggaagttcaagctgaacaagagcgcaaaaaagtagagggcgaaagacgagagctcttt
gaggagaggcgtgccaagcagacagagctgagactgttggaacagaaagtggagcttgct
cagttgcaagaggagtggaatgtgcacaacacaaaaattgtcaagtacatccgcacaaag
accaagccacccatcttctttctgcctgggaggatgtgctcagccactcagaagctctta
gatgagtctcagaaaaaaatgaatgttatgtttgaggagagacgcgaggcatttgctgaa
catctgaataagatggaggctcggcctcggcgccagtctcagagggacaccgctctgggt
aaggacctgaagaaagaagatcgagaggagggtaagcccatgggtcaggtagtcaaagtg
acaggtaaccggtttgatgtggagatggaggaggaagatgaggcaacaatagaggaggaa
gaggggggtgagggtgtaaagcataaggaggacagaaataaaaagccagagaaagtcgag
gagcaggagtctaagggggggactaaagcagatgagatggaggaggctgaggaagacagt
caagacactagaatagtggagtttagagatgtgggggagcagatggagggtactgcacta
gtgagggaggctgaagggcaggccagggacggggatcagaagatggaggatagtccagtg
gaggtaggtaatgagaaaggagtagaagagcagcaaccggttaaggcagaaaaggagccc
cttcacggtcgggacctcacagctttgtcagacggccaggagaagagcattgaaatgcaa
ccaaacgaagatgaagagccacgtacagaagtggccacacccctgctctcagagtgcaac
cctcatgtggaagtctctgatgtaacatctatggctcctgaggttcagatccccctactg
gagactgaaacggatccagagccgctcacaaccgagcagagccaagaggctgatcaaggt
gccataaagcagaccactaatgcccagcctgcccaggcccaggatgatgctgcggctccc
aaggaactggcgcccccgagcaaggaagccagcaggggacttaagaagtcaaaggacaag
aagggaggtggtggtggcagaagcagcagtagctcatctagcagctcctccggctcctcg
tccagtgggagctctggctcctcctctagtggctcctccagcaggagcagctcctccagt
ggcagctcctccagctcttctagcaggagccgcagccgagggaggaaggacaagaaacgt
aggaggaggccatccgagagggacagggagaggaagaaggcagtagttgagaggagccac
aagtcatccaagggcagtggtcgtgaatccaaaggttccaaagataagagctccaagtct
gacaggaagaggaccacctctgaaggcagccggtcagggaagaggtcctctcgcggcgac
agggatcgcaagtcagataggaaggaaaagaggcgttaa
DBGET
integrated database retrieval system
