Oncorhynchus mykiss (rainbow trout): 110498097
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Entry
110498097 CDS
T07259
Symbol
hnrnpua
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein U isoform X1
KO
K12888
heterogeneous nuclear ribonucleoprotein U
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110498097 (hnrnpua)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omy03041
]
110498097 (hnrnpua)
Spliceosome [BR:
omy03041
]
Common components
Common spliceosomal components
hnRNP proteins
110498097 (hnrnpua)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_33
SPRY
SAP
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
110498097
NCBI-ProteinID:
XP_036810950
Ensembl:
ENSOMYG00000015805
LinkDB
All DBs
Position
19:52561723..52576112
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AA seq
794 aa
AA seq
DB search
MSSINVNKLKVNELKDELKKRQLSDKGLKADLMDRLQAALNEEALARGAEAGENGGQGEG
AVGLNDMGEEDLDEDLVEERMEAGGVEDEDRCEGKAEKECANIDDNMGEEEDAGVDMDKS
DEDEDALLKEEEDDDDDEEMDKFDDDDAALGTLEREGDADKDTSAEQKNKKGVKRRREEH
GRGYFEFIEESKYSRAKSPQPPLEEEDEEFDDSTVCLDTYNSDLHFKVSRDRYSASSLTM
ESFAYLWAGGRASYGVAQGKACFEMKIIEKIPVKHISSKGMDIHEVLVGWSLANGTLLLG
EEEHSYAFSAKGKKTTNCVTEDFGECFDENDVVGCLINFEGSEVELSFNKNGQDLGVAFK
VDTASLDGRPLFPHVLCHNCAVEFNFGQREAPLFVPPAGYSFLQQVPVSKRVRGPKGPDT
KDDCEVIVMVGLPGAGKTAWVTKHTQEHPGKYNILGTNTILEKMMIASLKRQMKDVTKLT
AISQRAPLFLGKFIEIAARKKRNYILDQTNVSAPAQRRKMCLFAGFQRKAVVVCPTDDDY
KQRTQKKAETDGKDVPEHAVLKMKGIYTLPEPGDCFSEVSFVELQKDEASKLLDLYKEES
RSALPPEKKANQGGTPPKRGGNHRGRGGRGQGQWGGGQGQRGGRGGFQIRGNFRGGPGPR
GGFSRPPRGFLPPPAFRGGFSNRGNFNRGSGGMPSRGGAPRGGPGRGNMRNMGGNRGGNM
YRGSMTRGGGGGGRGRGDNRGNFTQKFRGRGGNNRSFNKNSNFGMNKAQAFNQSWQQGFW
NQKPWSQQYHPGYY
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgagctctatcaacgtgaataagttaaaggtaaacgagttgaaggacgagttgaagaag
aggcagctgtcggacaaggggctgaaggcggatcttatggaccggctgcaggccgcgctg
aatgaagaggctctagccagaggagctgaggccggggagaacggcggccaaggcgaaggg
gctgtcggcctgaatgacatgggcgaggaggacttggatgaagacctagttgaggagagg
atggaggcgggcggagtagaggatgaagataggtgcgaagggaaagcagagaaagaatgc
gccaatatcgacgataatatgggggaagaggaggatgcgggagtagatatggataaatcc
gacgaggatgaagatgctctactgaaagaagaagaggatgatgatgatgatgaggagatg
gataaattcgatgatgatgatgctgcactggggactctcgagagagagggggatgcggac
aaagacacgagcgctgagcagaagaataagaagggtgttaagagacgccgggaggaacat
ggaaggggctactttgagtttattgaagaaagcaagtacagccgggccaagtccccccag
cccccgctggaggaagaggacgaggagtttgacgacagcactgtctgcctggacacctat
aacagtgacctgcacttcaaggtgtcccgggaccgttacagcgcgtcatcccttaccatg
gagagctttgcctacctgtgggctggaggcagggcttcctacggagtagctcagggcaag
gcctgctttgagatgaagatcattgagaagatcccagtgaaacatatctccagtaaaggc
atggatatccatgaggttctggtgggctggtcactagccaatggaacactgttactggga
gaagaggaacactcgtatgccttctctgccaaagggaagaaaaccaccaactgtgtcaca
gaagacttcggagagtgcttcgacgaaaacgatgtcgtcggatgcctaatcaactttgaa
ggctcggaggtggagctgtcgttcaataagaacggtcaggacctaggcgtggccttcaaa
gttgacacggcatctttggacggacggcccctcttccctcacgtcctctgtcacaactgt
gctgtagagttcaacttcggccagagggaggcaccactgttcgtcccaccggccggctac
agcttcctacagcaggtccctgtgagcaagagggtccgaggccccaaagggcccgacacc
aaggatgactgtgaggtgatcgtgatggtaggcctgcctggcgctgggaagacggcgtgg
gtaaccaagcacactcaggagcaccctgggaaatacaacatcctgggaaccaacaccatc
ctggagaagatgatgatcgccagtctgaaacgccaaatgaaggatgtcaccaaactcacc
gccatctcccagcgtgcacctcttttcctgggaaaattcattgagatcgctgcacgcaaa
aaacgcaactacatccttgaccagaccaatgtgtcggccccggcccagaggaggaagatg
tgtctgtttgcaggcttccagaggaaggccgtggtggtgtgtcctactgacgacgactac
aagcagaggacacagaagaaagccgagacggatggtaaagacgtcccagagcacgccgta
ctcaagatgaaaggtatctacaccctgccggagccaggggattgcttcagtgaggtgagc
tttgtggagctgcagaaggacgaggcctccaagctgctggacttgtacaaggaggagagt
cgctccgccctgcccccagagaagaaggccaaccaggggggcacgccacccaagagaggg
ggcaaccaccgcggccgtgggggcagagggcaggggcagtggggaggtggtcaggggcag
agggggggcagaggaggcttccagatcagaggcaacttcaggggaggcccaggacctcgt
ggtggattcagtcgtccccccagaggtttcctccctcctccggccttccgagggggcttc
tccaaccggggcaacttcaacagggggagcgggggcatgcccagcagagggggtgcaccc
agggggggtcctggaaggggcaacatgaggaacatggggggtaataggggaggcaatatg
taccgaggcagcatgacccgcggaggaggtggaggtggaagaggacgtggggacaacagg
ggcaacttcacacagaagttcagaggcagaggaggcaacaatcgcagcttcaacaagaac
agcaactttggcatgaacaaggcccaggccttcaaccagagctggcagcaggggttctgg
aaccagaagccatggagccaacagtaccacccaggatactactga
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