Oncorhynchus mykiss (rainbow trout): 110498406
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Entry
110498406 CDS
T07259
Symbol
atl1
Name
(RefSeq) atlastin-1
KO
K17339
atlastin [EC:3.6.5.-]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110498406 (atl1)
Membrane trafficking [BR:
omy04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
110498406 (atl1)
Autophagy
ER-phagy
ER-phagy recepters
110498406 (atl1)
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GFIT
Motif
Pfam:
GBP
GBP_C
FA_desaturase
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
110498406
NCBI-ProteinID:
XP_036811208
LinkDB
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Position
19:complement(62052108..62089453)
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AA seq
564 aa
AA seq
DB search
MARNRKDRDSWGSFTDKATYDWSSEEEEPDGSARPIQVLVVKDDHTFELDEAALSRILLA
EEVQNREVVAISVAGAFRKGKSFLMDFMLRYMYSQASEEWLGEAEEPLTGFSWRGGSERE
TTGIQIWSEVFLVDKPDGRKVAVLLMDTQGTFDSQSTLRDSATVFALSTMISSMQVYNIS
QNVQEDDLQHLQLFTEYGRLAMEETFLKPFQSMIFLVRDWSFPYEFGYGQEGGMKFLEKR
LKISENQHEELQNVRKHIHSCFTNISCFLMPHPGLKVATNPNFDGRLKEIDREFINNLQV
LVPWLLSPRNLDVKEINGSNITCRGLLEYFKAYIKIYQGEELPHPKSMLQATAEANNLAA
VAAARDLYNRKMEQVCGGDRPFLAPAELQARQSDIREEALQVFRGVKKMGGEEFSRRYLL
QLEGEVDEVFVQYIKHNDSKNIFHAARTPATLFVVIFSMYVVAGITGFVGVDIIASVCNM
ILGLALITLCTWAYIRYSGEYRELGQVIDQVAGALWDQGSTNEALYKLYTAAASHRHLYH
HAFPGPQARGETSDTHQEPTRKRN
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggcgagaaaccgtaaagacagagacagctgggggtccttcacagacaaagccacctac
gactggagctcggaggaggaggagcctgatggaagtgcgcggcccatccaggtgctggtt
gtcaaggacgaccacaccttcgagttggacgaggcggcgctgagccgcatcctattggcc
gaagaggtccagaacagggaagtggtggccatatctgtggctggggcgttccgcaagggc
aagtccttcctcatggacttcatgctgcgttacatgtacagccaggcatctgaagagtgg
ctgggggaggcagaggagcctctgactgggttctcctggaggggtggatctgagagagag
accacagggattcagatctggagcgaagtctttctggtggacaagccagatggacgcaag
gtggctgttctactgatggatactcagggcacgttcgacagccagtcgacgttgagggat
tcagccaccgtgttcgcactaagcaccatgatcagctccatgcaggtgtacaacatctcc
cagaatgtccaggaggatgatcttcaacacttgcagctcttcactgagtatggtagactg
gccatggaggagacattcctcaagccattccagtccatgatattcctagtccgggattgg
agtttcccttacgagtttggctatggacaggaaggaggcatgaagttcctggagaagagg
ctcaagatctctgagaatcagcatgaggagctgcagaacgttcgtaaacacatccactcc
tgcttcaccaacatctcctgcttcctgatgccccaccccggactcaaagtggccaccaac
cccaacttcgacggcagactcaaagagatcgaccgtgagttcatcaacaacctgcaggtg
ctggtcccgtggctgctgagtcccaggaacctggatgtcaaggagatcaacggcagcaac
atcacctgcagaggcctgctagagtacttcaaggcatacatcaaaatctaccagggtgag
gagctgccacaccctaagtccatgctgcaggccacagcggaggccaacaacctggcagca
gtggcagcagccagggacctgtacaacaggaagatggagcaggtgtgtggtggggaccgg
cccttcctggccccggcagagctccaggccagacagagtgacatcagagaggaagccctc
caggtgtttcggggggtgaagaagatgggaggggaggagttcagccgacgctacctgcta
cagctggagggagaagtggacgaggtgttcgttcaatacatcaagcacaacgactccaag
aacatcttccacgccgcccgcaccccggccacgctgttcgtggtcatcttcagcatgtac
gtggtggcgggcatcacaggcttcgtgggggttgacatcatcgccagcgtgtgtaatatg
attctgggcctggcgttgatcaccctgtgtacctgggcctacatacgctactctggggag
taccgagagctgggccaggtcatcgaccaggtggctggagccctctgggaccagggaagc
acaaatgaggctctatataagctgtatactgctgcagccagtcacaggcacctgtaccac
catgcgttccctggcccccaggcccgtggagagacgagcgatacccaccaggaacccacc
aggaagaggaactga
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