KEGG   Oncorhynchus mykiss (rainbow trout): 110498406
Entry
110498406         CDS       T07259                                 
Symbol
atl1
Name
(RefSeq) atlastin-1
  KO
K17339  atlastin [EC:3.6.5.-]
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:omy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:omy04131]
    110498406 (atl1)
Membrane trafficking [BR:omy04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Others
   Others
    110498406 (atl1)
 Autophagy
  ER-phagy
   ER-phagy recepters
    110498406 (atl1)
SSDB
Motif
Pfam: GBP GBP_C FA_desaturase DUF2207_C
Other DBs
NCBI-GeneID: 110498406
NCBI-ProteinID: XP_036811208
LinkDB
Position
19:complement(62052108..62089453)
AA seq 564 aa
MARNRKDRDSWGSFTDKATYDWSSEEEEPDGSARPIQVLVVKDDHTFELDEAALSRILLA
EEVQNREVVAISVAGAFRKGKSFLMDFMLRYMYSQASEEWLGEAEEPLTGFSWRGGSERE
TTGIQIWSEVFLVDKPDGRKVAVLLMDTQGTFDSQSTLRDSATVFALSTMISSMQVYNIS
QNVQEDDLQHLQLFTEYGRLAMEETFLKPFQSMIFLVRDWSFPYEFGYGQEGGMKFLEKR
LKISENQHEELQNVRKHIHSCFTNISCFLMPHPGLKVATNPNFDGRLKEIDREFINNLQV
LVPWLLSPRNLDVKEINGSNITCRGLLEYFKAYIKIYQGEELPHPKSMLQATAEANNLAA
VAAARDLYNRKMEQVCGGDRPFLAPAELQARQSDIREEALQVFRGVKKMGGEEFSRRYLL
QLEGEVDEVFVQYIKHNDSKNIFHAARTPATLFVVIFSMYVVAGITGFVGVDIIASVCNM
ILGLALITLCTWAYIRYSGEYRELGQVIDQVAGALWDQGSTNEALYKLYTAAASHRHLYH
HAFPGPQARGETSDTHQEPTRKRN
NT seq 1695 nt   +upstreamnt  +downstreamnt
atggcgagaaaccgtaaagacagagacagctgggggtccttcacagacaaagccacctac
gactggagctcggaggaggaggagcctgatggaagtgcgcggcccatccaggtgctggtt
gtcaaggacgaccacaccttcgagttggacgaggcggcgctgagccgcatcctattggcc
gaagaggtccagaacagggaagtggtggccatatctgtggctggggcgttccgcaagggc
aagtccttcctcatggacttcatgctgcgttacatgtacagccaggcatctgaagagtgg
ctgggggaggcagaggagcctctgactgggttctcctggaggggtggatctgagagagag
accacagggattcagatctggagcgaagtctttctggtggacaagccagatggacgcaag
gtggctgttctactgatggatactcagggcacgttcgacagccagtcgacgttgagggat
tcagccaccgtgttcgcactaagcaccatgatcagctccatgcaggtgtacaacatctcc
cagaatgtccaggaggatgatcttcaacacttgcagctcttcactgagtatggtagactg
gccatggaggagacattcctcaagccattccagtccatgatattcctagtccgggattgg
agtttcccttacgagtttggctatggacaggaaggaggcatgaagttcctggagaagagg
ctcaagatctctgagaatcagcatgaggagctgcagaacgttcgtaaacacatccactcc
tgcttcaccaacatctcctgcttcctgatgccccaccccggactcaaagtggccaccaac
cccaacttcgacggcagactcaaagagatcgaccgtgagttcatcaacaacctgcaggtg
ctggtcccgtggctgctgagtcccaggaacctggatgtcaaggagatcaacggcagcaac
atcacctgcagaggcctgctagagtacttcaaggcatacatcaaaatctaccagggtgag
gagctgccacaccctaagtccatgctgcaggccacagcggaggccaacaacctggcagca
gtggcagcagccagggacctgtacaacaggaagatggagcaggtgtgtggtggggaccgg
cccttcctggccccggcagagctccaggccagacagagtgacatcagagaggaagccctc
caggtgtttcggggggtgaagaagatgggaggggaggagttcagccgacgctacctgcta
cagctggagggagaagtggacgaggtgttcgttcaatacatcaagcacaacgactccaag
aacatcttccacgccgcccgcaccccggccacgctgttcgtggtcatcttcagcatgtac
gtggtggcgggcatcacaggcttcgtgggggttgacatcatcgccagcgtgtgtaatatg
attctgggcctggcgttgatcaccctgtgtacctgggcctacatacgctactctggggag
taccgagagctgggccaggtcatcgaccaggtggctggagccctctgggaccagggaagc
acaaatgaggctctatataagctgtatactgctgcagccagtcacaggcacctgtaccac
catgcgttccctggcccccaggcccgtggagagacgagcgatacccaccaggaacccacc
aggaagaggaactga

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