Oncorhynchus mykiss (rainbow trout): 110498417
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Entry
110498417 CDS
T07259
Name
(RefSeq) calpain-3-like isoform X1
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
110498417
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
omy01002
]
110498417
Enzymes [BR:
omy01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
110498417
Peptidases and inhibitors [BR:
omy01002
]
Cysteine peptidases
Family C2: calpain family
110498417
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_7
CAPN13-like_C_EFh
EF-hand_8
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
110498417
NCBI-ProteinID:
XP_036811298
LinkDB
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Position
19:64971235..65020599
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AA seq
734 aa
AA seq
DB search
MPFTPSGFFCDRLIRERERRDGEGSLSKPLRFSGQDFTALKQECLTKKCLFEDDTFPASV
ESLGYKELGHKSNKVKNIVWKRPKEICENPQFIVGGASRTDICQGDLGDCWLLAAIACLT
LNEKLLYRVVPQEQSFSEGYGGIFHFQFWRYGDWVDVVIDDRIPTFNSQLVFTKSAERNE
FWSALLEKAYAKLHGSYEALKGGNTTEAMEDFTGGVTEFYEMKEAPKELYKIMKKALERG
SMMGCSIDSLVPARFETRTVTGLVKGHAYSVTAVEECKQSQHKEPKVRLVRLRNPWGQVE
WNGPWSDNSKEWVSLSKGEKDKLQHQSAEDGEFWMAFEDFKKNYTKIEICNLTPDALEDD
KIHKWTVSVNEGRWVRGCSAGGCRNYPDTFWTNPQYRLRLLEEDDDPEDNEVACSFVIAL
MQKNRRKERKMGANLFTIGFAIYEVPKEMHGNKQHMQKDFFLFNSSKARCKSYINLREVT
QRFRLSPGEYVIIPSTYEPHQEGEFILRVFSEKRNTSEEIENRIEADHPVPAPANAGEES
EEDQQFRSLFQQIAGDVSTGSTGRPVRPVSAWGSEMEITANELKNVLNSIVSKHKDLNTE
GFSLECCRSMISLMDVSSMDGTGRLNLQEFRHLWNKIKQWQGIFQHYNSDQASSINSYEM
RNAVNDAGFRLNNQLYDIITMRYANEGMNIDFDSFISCLVRLEAMFRAFQAFDQNGDGTI
RLSVLEWLQLTMYA
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgccctttacaccgtccggcttcttctgtgaccggctgatccgggagagagagagaaga
gatggagaaggatccctcagcaagcccctgcgcttcagcgggcaggactttaccgcactg
aaacaagagtgcctcaccaagaagtgcctgtttgaggatgacaccttcccagcctccgtg
gagtctctggggtacaaggagctgggacacaagtccaacaaggtcaagaacatcgtctgg
aagagacccaaggagatctgtgagaaccctcagttcattgtgggcggagccagcaggaca
gacatttgccagggagatcttggtgactgctggctgctggctgctatagcctgtctgact
ctgaatgagaagcttctctaccgggtcgttcctcaggaacagagcttctctgagggatat
ggaggaatcttccacttccagttctggcgctatggcgactgggttgacgttgttattgac
gaccgcatccccaccttcaacagccagctggtgttcaccaagtctgccgagagaaatgaa
ttctggagtgccctgctggagaaggcctacgccaagcttcacggttcctacgaggccctg
aagggcggtaacaccacggaggccatggaagactttaccgggggcgtgacagagttctat
gagatgaaggaggcgcccaaggagctgtacaagatcatgaagaaggccctggagagaggc
tctatgatgggctgctctatcgactccctggttcctgctcgtttcgagacgcgcactgtg
actggccttgtgaagggccacgcctactctgtgactgccgtcgaggagtgtaagcagtcc
cagcacaaggagcctaaggtgcgtctggtgcgcctcaggaacccctggggacaggtggag
tggaatgggccctggagtgacaactctaaggagtgggtgtctctgtccaagggagagaag
gacaagctccagcatcaaagtgcggaggacggagagttctggatggcctttgaggacttc
aagaagaactacactaagattgagatctgcaacctgacccctgatgccttggaggacgat
aagatccacaagtggacggtgtctgtgaacgagggtcgctgggtcagaggctgctccgcc
gggggctgtagaaactacccagatactttctggaccaaccctcagtaccgcctgcgtctc
ttggaggaggatgatgacccagaagacaacgaggtggcgtgttccttcgtgatcgctctg
atgcagaagaacagacggaaagagaggaagatgggagccaatctcttcaccatcggattt
gccatctacgaggtgccgaaggagatgcacggaaacaagcagcacatgcagaaggacttc
ttcctgttcaactcatccaaggctcgctgcaagtcctacatcaacctgagggaggtgacc
cagcgcttccgtctgagccccggggagtacgtgatcatcccgtctacctacgagcctcac
caggagggagagttcatcctcagagtcttctccgaaaagaggaacacctcagaggagata
gagaacaggatcgaggctgaccatccagtgccggccccagccaatgcgggggaggagagt
gaggaggaccagcagttccggagcctctttcagcagatagccggggatgtgagtacgggg
agtacagggaggccagtgaggccagtgagcgcttgggggagtgaaatggaaataaccgcc
aacgagctgaagaatgtcctcaacagcatcgtctccaaacataaggacctgaacacagag
ggttttagcctggagtgctgcaggagcatgatctctctcatggacgtatcctctatggac
gggacgggcagactcaacctgcaggagttcagacatctctggaacaagatcaagcagtgg
cagggaattttccaacactacaactcggaccaggctagtagcatcaacagctacgaaatg
agaaatgctgtcaacgatgcaggcttccgtctcaacaatcagctctatgacatcatcacc
atgcgttacgccaacgagggcatgaacatcgactttgacagcttcatcagctgtctggtc
cggctcgaagccatgttcagggcgttccaggccttcgaccagaatggagacggtacgatc
agactcagtgtcttggagtggctccagctgaccatgtatgcctag
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