Oncorhynchus mykiss (rainbow trout): 110498458
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Entry
110498458 CDS
T07259
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3 isoform X1
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110498458
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110498458
Enzymes [BR:
omy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
110498458
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
HECT type E3
110498458
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Motif
Other DBs
NCBI-GeneID:
110498458
NCBI-ProteinID:
XP_036789584
UniProt:
A0A8C7NR90
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All DBs
Position
10:complement(69172414..69209009)
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AA seq
1050 aa
AA seq
DB search
MMLCWGSTVEGQLGIGGAGDPVYEPRSCQAFNGRGLKEVACGWRHSLFLLRDGRVYTCGS
NRCGQLGHDKPGDSPELVVALDTQKIGVVSCGQAHSMALNEQGQVFAWGAGGGGQLGLGT
AEETVPIPRLIKKLCEHRISQIMCGNKHCIALSKDGQLFTWGQNLSGQLGLGKGEPSTLS
PQPLKSLSGIPLAQITAGGDHSFALSLSGAVFGWGKNSAGQLGLNDKQDRSVPCHIKFLR
SQKVVYISCGDEHTAALTKDGGLFTFGDGSRGQLGHDSTNNEPLPRQVQELMGSEVSQIA
CGRHHTLAFVPSSGLVYAFGCNTNGQLGTGTRGDIKSPLPVKSSLTGRLTGSPRHMSGPD
HYAITKINCGGDHNFLLYSDEKSSTPPEDFRVTNISRSISLINDASLNTWRMKLLDNTDS
TITNDVILLLSSTACWNASFLDESDDSHFKTNPKVPGIDLNSVRLLFETLSKPPFARLLE
QATKSFESLLIPQLPCSPPDVEAMRIYLILSECPALHDSKNYITLTIPLAMAILRLDANP
SKVLDNWWCLVDGGVFSRLVDMYKSIVVFLLTGGKALLVPVFLENYTSATLKLLEKLHKV
NLKAGHVEYNRFYIPDITTLVDIQEDYLKWFLSKAEIKMRTPAVQSSVTLCAYPFILNAQ
AKTTMLQTDAELQMQMAVSGANMHNVFMLLTLEPLLARNPFLVLHVRRDHLVSDALRELT
IYSDVDLKKPLKVIFDGEEAVDAGGVTKEFFLLLLKELMDPVYGMFTQYTQSNLLWFSDK
CFVEYNWFNLIGIICGLAIYNSTVVDLHFPLVLYKKLLGVAPTLEDLKELSPTEGRSLQQ
LLDHEEDDVEETFCLNFAITREYYGLTEVKELIPGGDRITVDKNNREEFVEAYLKYMFRD
SVSELYQAFSSGFLKVCGGKILSLFQPSELMAMVVGNNNYNWEEMEKNAVYKGEYSATHP
TVRMFWEVFHEFPLEKKKRFLLFLTGSDRIPIHGMESLRISIQSTSAEEHYLPVAHTCYN
LLDMPRYQTKETLHRRLTQAVEQYEGFSLV
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgatgctgtgttggggcagtactgtggagggccagctgggtatcggcggagcgggggac
ccagtgtacgaaccccgaagctgccaggcgttcaatgggcgtggcctgaaggaggtggcg
tgcggctggcgccattcgctattcctgttgcgtgatgggagagtgtacacgtgcggctcc
aaccgctgtgggcagctgggccacgacaagccgggggactcgccagaactggtggtggcc
ctggacacccagaagataggggtggtatcgtgcggccaggcccactccatggcgctgaat
gagcagggtcaggtgtttgcctggggggccggtggagggggtcagctgggactggggacc
gctgaggagaccgtcccaatccccaggctgatcaagaagctgtgcgagcatcgcatctct
caaataatgtgtggcaacaagcactgcatcgcactctctaaagacggtcagctgttcacg
tggggccagaacttgagcggtcagctgggtttggggaagggagagcccagcaccttgtct
ccccagcccctcaagtctctgtcagggatccccctggctcagatcaccgctgggggagac
cacagcttcgccctgtccctctctggagccgtgttcggctggggcaagaacagcgccgga
cagctggggttaaatgacaaacaggaccggtctgtcccttgccacatcaagttcctcaga
tcccaaaaagtggtttatatcagctgtggagacgagcatacagctgccctcaccaaggat
gggggtttgtttacgtttggggacggctctcgtggtcaactgggtcatgactccaccaac
aacgagcctctacccagacaggtgcaggagctgatgggcagcgaggtttcccagattgcc
tgtggcagacaccacaccctggcgtttgtgccttcctccggtctggtgtatgctttcggg
tgtaacaccaatggtcagctgggcaccgggacacgaggtgacatcaaaagcccacttcct
gtcaaaagcagcctcacaggaaggctcacaggaagtcctcgtcatatgtcagggcctgat
cattatgccattacaaaaatcaactgtggaggggaccataacttcctattgtactcagat
gaaaagagttccacccctcctgaagacttccgcgtcactaacatcagtagaagcatctct
ttgattaatgatgccagtttgaatacgtggaggatgaaactcctagacaacacagattcc
actatcaccaatgacgtcattctcctgctgtcttcaaccgcctgttggaacgccagcttc
ctggatgagagtgatgacagccattttaagaccaaccctaaagtccctggcatcgatctc
aactcagtccgcctgctgtttgagacactcagtaaaccgcccttcgccagactattggag
caggccactaagagttttgagagcctgctgatcccccagctgccctgctctccccctgac
gttgaggccatgaggatctacctgatcctgtcggagtgtcccgccctgcacgactccaag
aactacatcaccctcaccatccccctagccatggccatactccgcctggatgccaacccc
agcaaagtgcttgataactggtggtgcctggtggatggcggtgtgttctccaggctggtg
gacatgtataagagcatcgtggtgttcttgttaactggaggaaaggccctgctcgtccct
gtcttcctagaaaactacaccagtgccacgctaaagcttctagagaaacttcataaggtt
aacctgaaggccgggcatgtggagtacaaccgcttctatatccctgacatcaccaccctg
gtagacatccaggaagactacctcaagtggtttcttagtaaagcagagattaaaatgaga
acaccagcagtacagagctcagtgactttatgtgcctacccgttcatactgaacgcccaa
gccaagaccaccatgctgcaaactgacgctgagctacagatgcagatggcggtgagcggg
gccaacatgcataacgttttcatgctgctgacgctggaacccctcctggcgcggaacccc
ttcctggtgctccacgtacgcagggaccacttagtgagcgacgcgctgagagagctcacc
atctactctgacgtcgacctcaagaagcccctcaaggtgatctttgatggggaggaggcg
gtggatgcagggggggtaaccaaggagttcttcctactgctgttgaaggagctgatggac
cctgtgtacggcatgttcacccagtacacccagtccaacctgctctggttctctgataaa
tgttttgtggagtacaactggttcaatctgatagggatcatttgtgggctggccatctat
aacagcaccgtggtggacctccacttccccctggtcctttacaagaagctactgggcgta
gcacccactctggaggacctcaaggagctgtcgcccacagagggcaggagtttacaacag
ctcctggaccatgaggaagatgatgttgaggagacattttgtctaaactttgctatcacc
agagagtactatggtctgacggaagttaaggagcttatccctggaggagaccgcatcact
gtggacaagaacaacagggaggagtttgtggaggcctacctgaagtacatgttcagggac
tcagtgagcgagctgtaccaggccttctcctctgggtttctgaaggtgtgtggtgggaag
atcctgtcgctgttccagccctccgagcttatggccatggtggtgggaaacaacaactat
aactgggaggaaatggagaagaatgcggtttacaaaggagagtattcagccactcatccg
actgtgaggatgttttgggaggtattccatgagttccctctggaaaagaagaagcggttc
ttattattcctgacgggcagcgaccgcatccccatccatggcatggagagccttcgcatc
tccatccagtccacgtcggccgaggagcactatctgcccgtggcccacacctgctacaac
ctgctggacatgccccgctaccagaccaaagagaccctacaccgccgtctcacccaggcc
gtggagcagtacgagggcttcagcctggtgtga
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