Oncorhynchus mykiss (rainbow trout): 110498632
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Entry
110498632 CDS
T07259
Name
(RefSeq) LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase HERC6
KO
K22372
E3 ISG15--protein ligase [EC:2.3.2.-]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110498632
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
110498632
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Motif
Other DBs
NCBI-GeneID:
110498632
NCBI-ProteinID:
XP_036810120
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All DBs
Position
19:9881258..9893776
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AA seq
1018 aa
AA seq
DB search
MFCWGDGSSGQFGLNFENVSLPIAGNIFSDKVTEIACGEQHTLFLTVDGRILSCGRNSKG
QLGRQKKRDSKLPAPVEGLGVVVSVACGQDHSVAVCASGQVYSWGAGGEGQLGITLTTVS
KAPRPRPVQIPSPLPITVIQVACGNSHSLALTKGGQVFSWGLNSHGQLGLGKGVPLQPIP
ALVRSLIGVPVTQVAAGGTHTLALTLPGLVYCCGANRAGQLGLNRVDEKGRFNICAVPAL
RVLGVSFISCGEAHSAVLTKDGQVFTFGEGPRGQLGHNTSANELLPKLVEGMDGLASQIA
CGSHHTLVLGSSGQLWAFGSGVKGQLGTGITEGCLRPTLVLLERASGGAATVLHNDMKIS
VGWNSNFIYTTESSEREQPIGRLDKAKLQKWLSMEQGNSEAQREISLMFSTSSSLVASFT
KASESPSTKAAGALRVDLEAASQAFDQLFNIPWIRKSVNILPLVDTLCSSAAVIKSPEIF
MLLPTIPLLHDDQNVMNMVMALAIVIAEDLNETAMKILKDWWSSLEPSIMTKHILIWKNA
LSFMLRNGLLATHNPGVKFLLEALKYLHRANKRARRTQEVPASTFYVEEIIDRIIPMDDV
KLWRFWSTREDTEVTPVIFCRYPFVLSLICKMAIFNNNALFTKVVHHLTHRLTVMYPSGT
FRDNPESPPAPVFQLTLRRPSLIEDTFRQLGAADHDYFQRELVVRFMEDIKLSLVNIRDF
FLHVFEELLAPESEMFMYNDTKTLVWFPAKPRVEEKSYFLFGVLCGMALYNHNIVHLPFP
LALFKKMVGVKPSLEDLREFDPVVGGSLRYLLEDYTDDDVEENLDMTFTVIWDDQKVELD
PKETGKPVTSFNKKQFVDAYVNLAFNQSAEKVFEEFRRGFFKVCDRDVVELFQPEELRGV
MVGKEDYDWDTLKQNTVYDGEYHARHPNIITFWEAFEELTDDQKKAFLLFLTGCERVPIL
GMDKIQITVAVLQNSTELHFPESHTCYFLLFLPIYPSKEMLLARLKEAVAHNRGFWKE
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgttctgctggggagacggttcgagtggacagtttggtctaaactttgagaatgtgtct
cttccgatagcaggaaatatattctctgataaagtcacagaaattgcttgtggggagcaa
cacactttatttctcaccgtagatggcaggatcctatcatgtgggcgcaactcaaaggga
caacttggtagacagaagaaaagagattcaaaactaccagccccagtggagggtctgggg
gtagtggtctctgtggcttgtggtcaggaccactctgttgctgtgtgcgcgtcaggacag
gtgtactcctggggggcagggggtgagggacagctgggcatcacccttactactgtctcc
aaagcccccaggccaagaccagttcaaataccttcgcccttgccgataacagtgatacag
gttgcttgtggaaattcccattctttggccctgactaaaggaggacaggtgttctcatgg
ggtctgaacagccatggacagctgggcctggggaagggagtccctctgcagcccatacct
gccctggtgcgctccctcataggggtcccagtgacccaggtagcagccggaggaacccac
actctggccctcaccctcccaggcctggtctactgctgtggggcgaacagggctgggcag
ctgggactcaaccgtgtggatgagaaaggccggttcaacatctgtgctgtgcctgctctc
agagtcttgggggtttccttcatcagctgtggagaggcacattctgctgttctcaccaag
gatggacaggtgttcacctttggagagggcccccgaggccagcttgggcacaacacatca
gctaacgaactcctacccaaactggtagagggtatggatggactggcctcacagatagca
tgtggcagccatcacaccctggtgctggggtcctcaggtcaactctgggcctttggcagt
ggggtcaaaggtcagctagggactggcattacggagggctgcttgcgacccaccttagtg
ctgctggaaagggcttctggtggggcagcaacagtcttacacaacgacatgaagatatca
gtgggatggaattcaaacttcatttacaccactgagagttctgaaagagaacagccaatc
gggaggttagataaagccaagctgcaaaaatggctgtcgatggagcaaggaaattcagag
gcgcaaagagaaatatccttgatgttctcaacaagttcaagtcttgtggccagtttcacc
aaagccagtgagtctccatcaactaaagctgcaggagctttaagagtggacctagaggct
gctagccaggcttttgatcagctcttcaacatcccatggatcaggaaatcagtaaatata
ttgccactggtggacactctttgcagttcagcagctgtcatcaagtcaccagagatcttt
atgctactacccacaatccctcttctccacgatgaccagaatgtcatgaacatggtcatg
gctttagcaatagttatcgctgaggatctgaatgaaacggccatgaaaattttaaaagac
tggtggtcgtcactggagccttccatcatgactaagcacattctgatatggaagaatgcc
ctgtcattcatgctgaggaacggtcttctggctacccacaaccccggagtcaaattcctg
ctggaagccctcaagtacctccacagagcaaacaaaagggccagaagaacccaggaagtt
cccgccagtaccttttatgtggaagagatcattgataggataattcctatggatgatgtg
aagctttggcgcttttggtcaacaagggaggacacagaggtgacaccagtcatcttttgc
cgttacccatttgtgttgagtctgatctgcaagatggcgattttcaacaacaatgcactt
tttactaaggtggttcaccatctcacccaccggctaacagtgatgtatccttctggaacg
ttccgagacaacccagaatctccccctgctccagtcttccagttgaccttaaggcgcccg
tcactcatcgaagacaccttcagacaactgggtgctgcagatcatgactacttccagaga
gaacttgtggtgcggtttatggaggacatcaagctgtcgctcgtcaacataagggacttt
ttcctccatgtgtttgaagagctgttggcaccagagtctgagatgttcatgtacaacgac
accaagacactggtctggttccctgccaagcccagagtggaggagaagagctacttcctg
tttggtgtcttgtgtggcatggccctgtacaaccacaacattgtacacctgcccttccct
ctggccctgttcaagaagatggtgggggtcaagccctcactggaggacctgagagagttt
gaccctgttgtgggagggagtttgcggtacctcttggaggactacactgatgatgatgtt
gaagaaaacctggacatgaccttcaccgtgatctgggatgaccagaaggtggagttggat
cccaaagaaacaggaaaaccagtcacaagttttaacaagaagcagtttgttgatgcctac
gtcaaccttgccttcaaccaatcagcggagaaggtgtttgaagagttcaggagaggcttc
ttcaaggtgtgtgacagggacgtggtggagttgttccagcctgaggagctcaggggagtc
atggtggggaaagaggactacgactgggacacgctcaaacagaacactgtgtatgatgga
gagtaccatgccagacatcccaacatcatcacattctgggaggcttttgaggaactgaca
gacgaccaaaagaaagctttcctcctgttcctgacgggctgtgagcgcgttcctatcctg
ggcatggacaagatccagattactgtggcagtcctgcagaactctactgaactacatttc
ccagaatcccatacctgctacttcctactctttctgcccatctacccctccaaggagatg
ctgctggccaggctcaaagaggcggtggcccacaacagaggcttctggaaggagtaa
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