Oncorhynchus mykiss (rainbow trout): 110498653
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Entry
110498653 CDS
T07259
Name
(RefSeq) attractin isoform X1
KO
K24332
attractin
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
omy04091
]
110498653
Lectins [BR:
omy04091
]
C-Type lectins
Others
110498653
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ATRN-LZTR1
Kelch_KLHDC2_KLHL20_DRC7
GBD_ATRN
Kelch_1
Kelch_3
Kelch_4
EGF_LMN_ATRN
Kelch_5
Kelch_6
Kelch_2
CUB
PSI
EGF_TEN
NANM
EGF_Teneurin
PSI_integrin
EGF_2
EGF_laminin
TMEM100
Motif
Other DBs
NCBI-GeneID:
110498653
NCBI-ProteinID:
XP_036811321
LinkDB
All DBs
Position
19:65549526..65808375
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AA seq
1385 aa
AA seq
DB search
MDGAIRRPACILTSGLVKVGDRASMLQTLLIFSAFGLLLGLPAVTEAKECDKPCVNGKCN
TSTGNCVCSPGWVGDQCQHCGGRFRLTGPSGFLTDGPGNYKYKTKCTWLIEGTPNSILRL
RLDHFATECSWDHLYVYDGDSIYTPLLAAFSGLIVPERYGNETVPEVVSQSGYALLHFFS
DAAYNLTGFNISYSVNTCPNNCSGRGECRVGNSTGAVYCDCESNWKGEACDIPYCLSDCG
WPDRGHCLQDTKTCRCQPGWQGPDCSLSVPANSSFWQREEYPEPGLARASHKAVVDQGIM
WVVGGYVFNSSDYQMITAYNLSSHRWLSLNRSVNSVMGRYGHSLALHEGKIYMYGGKIDS
TGNVTSQLWVFHIQNQTWVSLSAGAQEQWAVVGHSAHVVPPLLEGGSAVMLVLFGHCPLY
GYISQVQQYDIARNTWRAVVTDGALVQGGYGHSSVFDPSSRAIYIHGGYKAFSANKYGLS
GDLYKYDVDRSRWTVLKDSGFFRYLHTAVIVSGTMLVFGGNTHNDTSMSHGAKCFSSDFM
AYDLACDEWSVLSRPDLHHDVNRFGHTAVYSDSVMYVFGGFNSLLLSDVLIYTPATCSSA
PSAAACIAAWPGVHCVWNANLGSCLPWDSNPGFLDEQTTLASCGTRTYVDNDRCDQYTDC
YSCTANTNGCQWCAVQCVSVSSNCTSVTGAIVEYDVCPKDNPSYVCNKKTSCKSCGVDQN
CQWEPRNQECIALPENICGESWHLVGNSCLKFITAKDSYDNAKLTCRGHNAVLASLTNQK
KVDFVLKELQIMNVLVSKYKALVTPWVGLRKINVSYWCWEDMSPFTNTSLQWLPGEPSDA
GFCGYLAEPASSGLKAQTCINPVNGSLCERAANHSAKQCRTACAMRATCAECTSSSSECM
WCSNMRQCVDSNAYVASFPFGQCMEWYTMNSCPPENCSGYRTCGQCLEQPGCGWCTDPSN
TGRGQCIEGSYRGPFQTAVPAPSTLPGPTSSPASQPALNISMCPYDTKYNWSFILCPACQ
CNGHSQCVNHSVCEKCEDLTTGLHCESCISGYYGDPTNGGSCQPCKCNGHAGVCNPNNGK
CFCTTKGIKGDRCHLCEVENRYQGNPLKGTCYYTLLIDYQFTFSLSQEDDRYYTAINFVA
TPEEQNRDLVVFINASKNFNLNITWAASFTAGTQTGEVIPIISRSNIKEFKDSFSNENFD
FRNNPNITFFVYVSNFTWPIKIQIAFSQHSNFMDLVQFFVTFFSCFLSLLLVAAVVWKIK
QSCWASRRREQLLREMQQMASRPFATINVALEMDEEPPDLIGGNVKTVPKPIAMEPCFGN
KAAVLSIFVRLPRGTGGIPPPGQSGLTVASALVDVSQQMCLGYKEKSCGLRNRKQHPSAQ
PSTCI
NT seq
4158 nt
NT seq
+upstream
nt +downstream
nt
atggacggggcgatacggcggccggcctgcatcctgactagcgggctggtaaaggttggt
gaccgggcctcgatgctccaaacactgctcattttctcggctttcgggctgctccttgga
ctgcccgctgtcaccgaggcgaaagaatgcgacaaaccgtgcgtgaatgggaaatgtaac
acgtctacgggcaactgtgtgtgcagccccggctgggtcggggaccaatgccaacactgc
ggaggaaggttcaggctgacgggtccctcagggttcctgacagacggaccagggaactac
aagtacaagaccaagtgcacctggctcattgagggaacgcccaacagcatcctcagactg
aggctggaccactttgctacagagtgcagctgggaccacctgtatgtgtacgatggggac
tctatctacactcctctactggctgccttcagtgggttgatagttcctgagcgctatggc
aacgagactgttccggaggtggtttcacagtctggttacgccctcctccacttcttcagc
gacgctgcctataacctgaccggcttcaacatctcatatagtgtgaacacgtgtcctaac
aactgttctggccgaggggagtgtcgcgttggaaactcaacaggtgctgtatattgtgac
tgtgaatccaattggaagggcgaggcctgtgatatcccttactgcctgtcagactgtggt
tggcctgacaggggacactgccttcaggacacaaagacatgtcgatgccagcctgggtgg
caaggtccagactgctctctgtccgtcccagccaactcctcgttctggcagcgggaggag
taccccgagccaggtctggccagggcttcccacaaggctgtagtggaccaggggatcatg
tgggtcgtcgggggttacgtcttcaactcctcagactaccagatgattacagcgtataac
ctcagctcccatcgctggctgtctctcaaccgctctgtcaactccgtcatgggacgatac
ggacactctctggcactacatgagggaaagatctacatgtacggaggaaagatagactct
actggcaacgtgaccagccagctgtgggtgttccacatccagaaccagacctgggtgtcc
ctctccgctggagcccaggaacagtgggccgtggtgggacactctgctcatgtagtgccc
cccctgctggagggaggtagtgcggtcatgctggtcctctttggacactgccctctatat
ggatacatcagccaggtgcagcagtatgacatcgctaggaacacgtggcgtgccgtggtt
accgatggagccctggtgcagggagggtacggccacagcagtgtgtttgacccctcctcc
cgagccatctacatccacggagggtacaaggccttcagcgctaacaagtacggcctgtct
ggagacctgtacaagtacgacgtggaccgcagccgatggacagttctaaaggacagcggg
ttcttccggtacctccacacggcggtcatcgttagcggaaccatgctggtgtttggagga
aacacgcacaacgacacttccatgagccacggcgccaagtgcttctcctcggacttcatg
gcctatgacctggcatgtgatgagtggtcagtgctgtccagaccagacctccaccatgat
gtcaaccggttcggacacacggccgtctacagtgacagtgtgatgtatgtgtttgggggg
ttcaacagtctgttgttgagtgatgtcctgatctacacgccagccacctgctccagcgct
cccagcgctgccgcctgtatagcggcctggccgggggttcactgcgtttggaatgctaac
ctgggctcctgcctgccctgggactcgaaccccggattcctggatgagcagaccaccctg
gcctcctgtggaaccagaacatatgttgacaacgatcgttgtgaccagtacacggactgc
tacagctgtacagccaatactaacggctgccagtggtgtgctgttcagtgtgtctccgta
agctccaactgtacgtccgtcacgggggccatagtggagtatgatgtctgtcctaaagac
aacccgtcatatgtctgcaacaagaagaccagctgtaagagctgtggggtggaccagaac
tgccagtgggaacctcgaaaccaggagtgcatcgctctaccagagaatatttgtggtgag
agttggcacctggtgggtaactcttgtctgaagttcatcacagcaaaggactcgtacgac
aacgccaagctgacctgtcggggtcacaacgccgtcctggcctcgttgaccaatcagaag
aaggtggacttcgtcctaaaagagctgcagatcatgaatgttctggtgagcaagtacaag
gccttggtgacgccgtgggtggggctgaggaagatcaacgtctcctattggtgctgggaa
gacatgtcacccttcactaacacctccctccagtggttgccaggggaacccagcgacgcc
ggtttctgtggttacctagcagagccggcttccagcggtcttaaggcccagacctgcatc
aaccctgttaacgggagtctgtgtgaacgagcagccaatcacagtgccaagcagtgtcgg
acggcgtgcgccatgcgggctacgtgtgctgagtgtaccagcagcagctctgagtgtatg
tggtgcagcaacatgaggcagtgtgtggactctaatgcatacgtagcctccttccccttc
ggacagtgtatggagtggtacactatgaacagctgtccacctgagaactgttctgggtac
aggacgtgtggccagtgtctagagcagcctggctgtggctggtgtacagaccccagcaat
acagggcgtggccagtgcattgagggatcctatcgggggccattccagaccgcagtcccc
gccccctccaccctgcctggccccacctctagtcccgcctcccagccggctctcaacatc
agcatgtgtccttacgataccaagtacaactggagctttatactctgtccagcgtgccaa
tgtaacggccacagtcagtgtgtgaatcacagtgtatgtgagaagtgtgaggacctgaca
acagggctccattgtgagagctgcatctctggttactatggagaccccaccaacgggggc
agctgccaaccgtgtaagtgtaatggccatgccggtgtgtgtaacccaaacaacgggaag
tgtttctgcaccaccaagggcatcaaaggagaccgctgtcacctgtgtgaggtggagaac
cgttaccaaggaaaccctctgaaaggaacatgttactacaccctgctgatagactaccag
ttcaccttcagtctgtctcaggaggacgaccgctactacaccgccatcaactttgtagca
acacccgaggagcagaatcgtgatctggttgttttcattaacgcctccaaaaacttcaac
ctcaacatcacctgggctgccagcttcacagcaggtactcagacaggcgaggtgatccca
atcatctccaggagtaacattaaggagtttaaagacagtttctccaatgagaactttgac
ttccgcaacaacccaaacatcaccttcttcgtctatgtcagcaacttcacctggcccatc
aagatacaaattgccttctctcagcacagtaacttcatggatctggtgcagttcttcgtc
acattcttcagctgcttcctttctctcctcctggtggcggcagtcgtctggaagatcaaa
cagagctgctgggcgtcacggcgacgagagcaactcctccgtgagatgcagcagatggct
agccggccgttcgccaccatcaatgttgccttggaaatggacgaggagccgccggaccta
attggtggaaacgtcaagacggtgcccaagcccatcgccatggagccgtgttttgggaac
aaggctgctgtcctctccatcttcgtccgtttacccagaggcaccgggggcatcccccca
cccggtcagtctggtctaacggtggcctcggccctggtggatgtgtctcagcagatgtgt
cttggttacaaggagaagtcatgtggtctgaggaacaggaagcaacacccctctgcacag
ccctccacctgtatctga
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