Oncorhynchus mykiss (rainbow trout): 110498733
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Entry
110498733 CDS
T07259
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1G
KO
K04854
voltage-dependent calcium channel T type alpha-1G
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04010
MAPK signaling pathway
omy04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
110498733
04020 Calcium signaling pathway
110498733
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
omy04040
]
110498733
Ion channels [BR:
omy04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
110498733
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
DUF4834
Motif
Other DBs
NCBI-GeneID:
110498733
NCBI-ProteinID:
XP_036812355
Ensembl:
ENSOMYG00000012664
LinkDB
All DBs
Position
20:complement(8840694..9039321)
Genome browser
AA seq
2350 aa
AA seq
DB search
MLVILLNCVTLGMFQPCEDHDCESERCKILEDFDDFIFAFFAVEMVIKMVALGIFGKKCY
LGDTWNRLDFFIVLAGMLEYSLNLQNVSFSAVRTVRVLRPLRAINRVPSMRILVTLLLDT
LPMLGNVLLLCFFVFFIFGIVGVQLWAGLLRNRCFLPENFSLPLSVELGNYYHTENDDEN
PFICSMPRENGMRLCSSVPTLYEEGGLQCQMDMKSYNSTDNTTCINWNQYYSNCSAGHVN
PFKGAINFDNICYAWIAIFQVITLEGWVDIMYFVMDSHSFYNFIYFILLIIIGSFFMINL
CLVVIATQFSETKQRESQLMKEQRIRFLSNASTLASFSEPGSCYDELLKLLVHVIRKGCR
QVAHVCRALMRRAGMNIAASPPALERERGSQRRRRKASRQGSVVSRKGSMSVHHLAHQHH
HHHHHYHLVNGSVRGGLGGRGVEGVGGGGADVETGSHSNNGGAGRLMLGPPPSTSDLNLA
TPTSPANPALGIMCHTDCHLEPTTPTTLTPTPSPFSLAPIPMSRAMKRNSVPFAAPGPKN
YPTLQPRTLMESRSVSVTASTISNINLNLNIPPLTLERGPQSLVNTHTPTPAQLSNRDLS
VIGTLDPSFPFDPESCPYCAKALAGESEGTDGNENPGDSDSEGIYEFTQDLHHRDRRDRR
DSRQPRKGQRKLGTTAGRVVRAWRLVCDTFRKIVDSKYFGRGIMIAILINTLSMGIEYHE
QPDELTNALEISNIVFTSLFALEMLLKVLVYGPFGYIKNPYNIFDGIIVVISVWEIVGQQ
GGGLSVLRTFRLMRVLKLVRFMPALQRQLVVLMKTMDNVATFCMLLMLFIFIFSILGMHL
FGCKFGSERDGDTLPDRKNFDSLLWAIVTVFQILTQEDWNKVLYNGMASTTPVAALYFIA
LMTFGNYVLFNLLVAILVEGFQTEGEESKSVSEADLSSRSMEDVNGSRKDVSGSPVPING
HVDLKTSLTPPLITHTAATPMPVPKLPAVGDPALGYESRRGSNVSMDLASYDKSPTSARS
TSPYAPWCSASGWTSRRSSWNSLGRAPSLKRTKLQSGERRSLLSGEGGSSSEDEEGGGGG
TSEGDDASLCRINSMSQPRHRRMESVETRGSIDLAPDTLLQVPYLYRSASMHSSRPPSLG
GLRAPEHSDCNGKGTSAPGGALSPTQLSLEDNTEDDAAEEEVVVGHFARLLGWLDRKQPE
WCRQRDTWSLYILPPDSRFRMACNKIITHKMFDHIVLVIIFLNCITIAMERPRIDPYSVE
RIFLTLSNYIFTAIFVAEMTVKVAALGWLFGDKAYLRSSWNILDGILVMISAIDILVSLV
SNSSPKILGMLRVLRLLRTLRPLRVISRAPGLKLVVETLMSSLKPIGNIVVICCAFFIIF
GILGVQLFKGKFFACQGDDVRNITNKSDCIMANYKWVRQQYNFDNLAQALMSLFVLASKD
GWVDIMYDGLDAVGVNQQPQLNYNPWMLLYFISFLLIVSFFVLNMFVGVVVENFHKCRRS
QEAEEAKRREEKRLKRMEKKRRSKEKELAAQSKPYYSDYSPTRLLIHKMCTSQYLDLFIT
IVIALNVITMAMEHYQQPKELDEALKICNYIFTIVFVLESVFKLVAFGFRRFFKDRWNQL
DLAIVLLSIMGITLEEIEVNASLPINPTIIRIMRVLRIARVLKLLKMAVGMRALLDTVMQ
ALPQVGNLGLLFMLLFFIFAALGVELFGDLICDELHPCEGLGRYATFKNFGMAFLLLFRV
STGDNWNGIMKDTLRDCQQENAGTCYNTVVSPIYFVSFVLTAQFVLVNVVIAVLMKHLEE
SNKEAKEEAELEAELELELQHGGRGGCGSGRSPQLSPLALGMEEGSGGSPWRSPEREIQR
GNVMDSPPADITRRDSIHISTDAPLGLEPPLEVELLDPGEPLEDNLLSVRKSAVGRTHSL
PNDSYMFLPLEPFGPPGAGLAPGLSPVLTQSTGPQHIEALSSALSGSSTSVRSQPEESSQ
QSAVPTDIFRPISPHSLSDSENIPRLPPPQHTHTLSRTLRRQVAVSNDSQEALWSDGGEG
VLNVASLALPLSSSSSSSSHLHQQPSLWLVPATPGASPQLSRPSSVHTQHPFSNHDQHHL
SSSPNSPSSLSSPPPPLPSARPWRQEEASADHEVSLINRAGLAGSEDVTGVGLESEVGGL
NGSYQGHEVGRGEGSRPCLRQLKRFHSADAQGRSILASRPRPLSWLDDPRRHSVEVCSSV
ESSPQRSTTSSGFVSRADSLQIHSQTTTKTLPSPRRKKKMSPPCISVDPPDGLESQPGLQ
PTLGGLGGLGMPPPLPSRDTSCLRRRAPSSDSKDSFDLGAGEGLGQEGGGPNPKLLTLPS
FSFEKTSSEH
NT seq
7053 nt
NT seq
+upstream
nt +downstream
nt
atgctggtgatcttgttgaactgcgtcaccctggggatgttccaaccctgtgaggaccac
gactgtgagtcggaacgttgcaagatcctggaggactttgatgactttatctttgcgttc
tttgcggtggagatggtcatcaagatggtggcgctgggcatctttgggaagaagtgttat
ctaggagacacctggaacaggctcgacttctttatcgtactggccggaatgctagagtac
tctctgaacctgcagaacgtgagtttctcagcggtgagaacggttcgagttctgagaccc
ctccgagccatcaacagagtacctagtatgcgtatcctggtgaccctgctactggacacc
ctgcccatgctggggaatgtcctgctgctctgtttctttgtcttcttcatcttcggcatt
gtgggcgtgcagctgtgggcggggctactgaggaaccgctgcttcctgcctgagaacttc
tcacttcctctgtccgtcgagctcggcaactattaccacacggagaacgatgacgagaac
cccttcatctgctccatgcccagggagaacggcatgcgtctgtgttcctctgtgcccacc
ctgtatgaggagggaggtctccagtgtcagatggacatgaagtcctacaacagcacagac
aacaccacctgtatcaactggaaccagtactacagtaactgctcggcgggacacgtcaac
cccttcaaaggagccatcaactttgataacatctgctacgcctggatcgccatctttcag
gtgatcacgctggagggctgggtggacatcatgtactttgtgatggattctcactccttc
tacaacttcatctacttcatcctcctcatcatcattggctcgttcttcatgatcaacctg
tgtctggtcgtcatcgccacccagttcagtgagaccaagcagagggagagccagctgatg
aaggaacagcgcatccgtttcctgtccaacgctagtaccctggcctccttctccgagccg
ggttcctgctacgacgagctgctcaaactcctggtccatgtcatccgcaaggggtgcagg
caggtggcccatgtctgtcgggccttgatgcgccgtgctgggatgaacatcgcagcctct
ccccctgccctggagcgagagagggggagccagagaaggaggaggaaggcttccagacag
ggttctgtggtctccagaaaagggtcgatgtccgttcatcacttggctcaccaacaccac
catcatcatcatcactatcacctagtgaatgggagtgtgagggggggactagggggtagg
ggggtggagggggtcgggggaggaggggcagacgtggagacgggttcacatagcaacaac
ggtggcgctggacggctcatgttgggtcctcctccatcgacctctgacctgaacttggcg
accccgacgtcaccagccaatcccgcgctgggcatcatgtgccacacagactgccacctg
gagcccaccacccccactaccctcacccctacccctagccccttctccctggcacccatc
cccatgtccagggctatgaagaggaactcagtgccctttgctgcccccggacctaagaac
taccccaccctacagcccaggacattaatggagtctagaagtgtcagtgttacagctagt
accatcagtaatataaacctcaacctcaatataccaccactaaccttggagaggggacca
cagagtctggtgaacacacacacacccacgccagcccagctatccaaccgtgacctgagt
gtcatcggaaccctggacccctcgttcccctttgacccagagtcatgcccatactgtgcc
aaggccctagcaggggaatcagagggcacggacggaaacgagaaccccggggactcagac
agcgagggcatctacgagttcacccaggacctccaccacagagaccgcagggaccgtcgg
gacagccgtcagcccaggaaggggcagcgaaagctgggtaccacggcagggcgagtggtc
cgagcctggaggctggtgtgtgacacctttaggaagatagtcgacagcaagtactttgga
agagggatcatgatcgccattctgattaatacactgagtatggggattgaataccacgaa
cagcctgatgagctgaccaatgcgttggagatcagtaacatagtgttcaccagtctgttt
gccttggagatgttactcaaggtgttggtctatgggccattcggatacatcaaaaacccc
tacaacatttttgacgggatcatagtggtcatcagtgtatgggagatcgtgggccagcag
ggcggtggtctgtcagtgctgcgtaccttcagactgatgcgcgtgttgaagctggtgcgc
ttcatgcccgctctgcagaggcagctggtggtgctgatgaagacgatggacaacgtggcc
accttctgtatgctactcatgctcttcattttcatcttcagtatcctgggtatgcatctg
tttggctgtaagtttggatcagagagagatggagacactctaccagacaggaagaacttt
gactctctgctctgggccatcgtcactgtgtttcagatcctaactcaagaggactggaac
aaggtgttgtataatggtatggcttccaccactccagtggctgctctctacttcatcgcc
ctcatgacctttgggaactacgtcctcttcaacctgcttgtggccatcttggtcgaaggc
ttccagactgagggagaagaatccaagtcagtgtcggaggcagatttatcctcgaggagt
atggaggacgtgaacggcagtagaaaggatgtgtctggctccccggtcccaataaacggt
catgttgacctgaagaccagtctgacccctcctctgattacccatactgctgccaccccc
atgcccgttcccaagctgcccgccgtgggtgaccctgccctgggctacgaatcccgacgc
ggcagcaatgtctccatggacctagcctcttacgacaagtctccgaccagtgcccgtagc
acctccccttacgccccgtggtgctctgccagtggctggaccagccgtcgatcgagctgg
aacagcttaggccgtgccccctcgctcaaacgaacaaagcttcagtctggcgaacggcgg
tcgctcctctccggcgagggagggtccagttcggaggatgaggaggggggaggaggggga
acatcggagggggacgatgcatccctgtgtcgtattaactccatgtcccagcccagacac
aggaggatggagtcggtggagaccagggggtccatagacctggcccccgacacactgcta
caggtgccctacctgtatcgctcagccagtatgcacagctccagacccccctcgctagga
ggcctgagagccccagaacacagtgactgtaatgggaagggtacttcggcccctggcggg
gccctgtcccctacacagctctccctggaggacaacacagaggacgacgcagcagaggag
gaggtggtcgtgggtcattttgccaggctgttaggctggctggacaggaaacagccagag
tggtgtcgacagagagatacctggtccctgtacatattacccccagactccaggtttcgg
atggcgtgcaataagatcataacccacaagatgtttgaccacattgttctggtcatcatc
ttcctcaactgcatcaccatcgccatggagaggccgaggatagacccatacagcgtggag
cgtatcttcctcacgttatccaactacatcttcacagcgatcttcgtggctgagatgaca
gtcaaggtggctgcactgggctggttatttggtgataaggcctacctgaggagcagctgg
aacattctagatgggattttagtgatgatttcagccatagatatcctggtctcattggta
tcgaacagcagccccaagatactgggcatgctcagagtgctgcgcttgctacggacgctc
aggccactacgtgttatcagcagggcgccaggtctgaagctggtagtggagactctgatg
tcatctctgaagcctatagggaacatcgtggtcatctgctgcgctttcttcataatcttt
ggtatcctgggagtacagctcttcaaggggaagttctttgcatgtcagggagatgacgtg
agaaacatcaccaacaagtcggactgtataatggccaactacaaatgggttagacagcag
tacaactttgataacctggcacaggctctgatgtctctcttcgtgctggcttctaaggat
ggttgggtggatatcatgtatgatggattagatgcagtgggagtcaaccaacagccacag
ctgaactacaacccgtggatgctcctctacttcatctccttcctgctcatcgtcagcttc
tttgtgctcaacatgttcgtgggcgtggtggtggagaacttccacaagtgtcggcgcagc
caggaggccgaggaggccaagcgcagggaggagaagagactgaaacggatggagaaaaag
agacggagtaaggagaaggagctggctgctcagagtaagccttactactcggattactcc
cccactcgtctcctcatccacaagatgtgcacctcccagtatctggacctcttcattacc
attgtcatcgcactcaatgtcatcaccatggcgatggaacactaccagcagccaaaggag
ttggacgaggcgctgaagatctgtaactacatcttcaccatcgtcttcgtcctggagtct
gtcttcaagctggtggcctttggcttccgacgtttcttcaaggacaggtggaaccagctg
gacctggccatagtgttgttgtccatcatgggcatcactctggaggagattgaggtcaac
gcatccctgcccatcaaccctactatcatcagaatcatgagagtgctaaggatagcacga
gtgctgaagctactgaagatggcagtggggatgagagcgttgctggacactgtcatgcag
gctctgcctcaggtggggaatctggggcttctcttcatgctgctcttctttatcttcgca
gcactgggagtggaactgtttggtgatctcatttgtgatgagctgcacccgtgtgagggc
ttgggacgctacgctacgtttaagaactttggcatggccttcctgttgctgttcagagta
tccaccggagacaactggaacggcataatgaaggacaccctgcgagactgtcaacaggag
aatgcaggcacctgttacaacacggtggtctctcctatctactttgtctcctttgtgctg
actgcccagtttgtcttggtcaacgtggtcatagccgtcctcatgaagcacctggaggag
agcaacaaagaggccaaggaggaggcagagctagaggctgaactagagctggagctccag
catggaggaaggggagggtgtggcagtgggagatcaccccagctaagccctctggccctg
ggcatggaggagggatctggcggctccccctggaggtctccagagagggagatccagagg
ggcaatgtgatggattctcccccagcagatatcactagaagagactccatacacatcagc
actgatgctccgctaggcctggagccaccactagaggtggagttacttgatcctggggag
ccgttggaggacaacctgttgagtgtacggaagtcagcggtgggccgcacccactctcta
cccaatgacagctacatgttcctgcctctggagcccttcggacccccaggagccggcctg
gctcctggcttatctccagtactgacacagtctacagggccgcagcacatagaggcactt
agcagcgccctgtcaggctccagtacctcggtgcggtcccaaccagaggagagctcccag
cagtcggctgtgcctacagacatcttcagacccatcagtcctcacagcctctcagactca
gagaatataccccgactacccccgccacagcacacacacacacttagccgcacactccgc
agacaggtggcagtatctaatgattcccaggaggctctgtggtctgacggaggggagggg
gtcctaaatgtagcttccctagccctccccctttcctcctcctcttcctcatcctcccat
cttcaccagcagccttctctctggctggtccctgccaccccaggggcgtcccctcaactg
tcgcgccccagtagtgttcacacccaacaccccttctcaaaccacgaccagcaccacctc
tcctcctcacccaactccccctcctccctctcctcaccccctcctcccctcccctccgct
cgcccctggagacaggaagaggcctcggcagaccacgaggtgtcgctcatcaaccgggcg
gggctggcggggagtgaggatgtcaccggtgtcggactggagtcagaggtcggaggtctc
aatggcagttaccaaggtcatgaggttggccgtggtgaggggagccggccatgcctgaga
cagctgaagaggttccacagcgctgacgcccagggccggagcattctagcgtcccggcca
cgccccctgtcctggttggacgatcctcggcgccactcagtggaggtgtgttcgtctgta
gagtccagtccccagcgcagcaccacgtcctcggggttcgtctcccgagcagacagcctc
cagatccactcccagaccacaacaaagaccctgccctctccccgacgcaagaagaaaatg
agccccccgtgtatctccgtagacccccctgatggactggagtcccagcccggcctccaa
cctaccctgggaggtttggggggcctagggatgccccctcccttacccagccgggatacc
tcctgtctgaggaggcgggctccctccagtgactccaaggactcctttgacctcggggca
ggagaggggctgggccaggagggaggggggcccaaccccaagctgttgactctgcccagc
ttctcctttgagaagacaagctctgagcactga
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integrated database retrieval system
