Oncorhynchus mykiss (rainbow trout): 110498796
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Entry
110498796 CDS
T07259
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04514
Cell adhesion molecule (CAM) interaction
omy04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
110498796
04517 IgSF CAM signaling
110498796
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omy04515
]
110498796
Cell adhesion molecules [BR:
omy04515
]
Immunoglobulin superfamily
NGL family
110498796
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_9
ig
LRR_14
V-set
Ig_2
VEGFR1-3_N_Ig-like
LRRNT
DUF7617
Pam3_Gp34
Motif
Other DBs
NCBI-GeneID:
110498796
NCBI-ProteinID:
XP_021431097
Ensembl:
ENSOMYG00000011438
UniProt:
A0A8C7PKT4
LinkDB
All DBs
Position
20:complement(927421..946869)
Genome browser
AA seq
751 aa
AA seq
DB search
MHVVMMTSPSTPSPLLWFVQLLLWLHHHGPQLTEAVPPCPNPCSCSNQASRVICTRKSLE
DVPDSISVNTRYLNLQENTIQVIKSDTFKHLRHLEILQLSKNHIRQIEVGAFNGLPNLNT
LELFDNRLTLVPSQAFEYLSKLRELWLRNNPIETLPAYAFHRVPSLRRLDLGELRKLDYI
SEAAFEGLVNLRFLNLGMCGLKDIPNLTPLVRLEELELSGNQLGIVRPGSFQGLVSLRKL
WLMHSKVTVIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLHQLERVHLNHNPWVCNCD
VLWLSWWLKETVPSNTTCCARCHAPPVLKGRYIGELDQSHFTCYAPVIVEPPTDLNVTEG
MAAELKCRTGTSMTSVNWLTPNGTLMTHGSYRVRISVLHDGTLNFTNVTVQDTGQYTCMV
TNSAGNTTATAVLNVSSSDSSNPYSFFTTVTVETVETNNGEDAGRQYINETYVPPDYLGP
TFSGGVLGKGRAGFTISPSRSSLHSFSPRATRNTENTVTVSIMDVTNITGLDDVMKTTKI
IIGCFVAITFMAAVMLVVFYKLRKQHQLHKHHGPTRAIEIINVEDEIGAGAGSGISGGST
MQSGCGGDGTLRMHHPEIVNLPNIGRSEHLNHYYKANHFNNNVMGLSIGTGAGVGTLSNK
NNMSPLNQQGQDIPISCTQVPIPSATFQTMSGNGTNTNPLSVSPPLPMSLPMPPMGLHGS
IKGFMGQNQNPQMEPLLFKGNSKENVQETQI
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgcatgttgtcatgatgaccagcccctccaccccctcccccctcctctggttcgtccag
cttttgctgtggcttcaccaccatggacctcagctaacagaggcagtacccccatgtccc
aacccctgtagctgttccaatcaggcaagccgtgtcatctgtacaaggaagagtttagag
gacgtaccggacagtatatctgtgaacacaagatacctcaacttacaagagaacacgatt
caggtgataaagtcagacacgttcaagcacctgcggcatttggaaatactgcagctctcc
aagaatcacatccgacagattgaggtgggcgcgttcaatggcctgccaaacctcaacacc
cttgagctctttgacaatcgcctcacgctggtaccatcgcaggcctttgagtacctcagc
aagctgcgggagctctggctacggaacaaccctatcgagacactgccagcgtacgccttt
caccgcgttccctccctgcgccggctcgacctgggcgaactcagaaagctggactacatc
tctgaggccgcctttgagggcctggtcaacttgcgcttcctgaacctgggcatgtgcggc
ctgaaggacatccccaacctcacacccttggtcagacttgaggagctggagctgtcagga
aaccagctggggatcgtcaggccgggctccttccagggcctggtgtcactgcgcaagctg
tggctcatgcactccaaggtgacggtcattgagcgcaatgccttcgacgacctgaagaac
ctggaggagctcaatctgtcccacaactctctgcattcactgccccacgacctcttcacc
ccgctgcaccagttggagcgggtgcacctcaaccacaacccctgggtgtgcaactgcgat
gtcctgtggctcagttggtggctcaaggagacagtgcccagtaacaccacatgctgtgcc
cgttgccacgcgcccccagtcctgaagggccgctacatcggtgagctggaccagagccac
ttcacatgctacgctcccgtcatcgtagagccacccaccgacctcaatgtcacagagggt
atggccgcggagctgaagtgtcgcactggcacctccatgacatctgtcaactggctcacc
ccaaatggcaccctcatgacccatggatcgtatcgcgtcaggatctcagtccttcacgac
ggaaccctgaatttcaccaacgttactgtgcaggacacgggccaatacacgtgcatggtg
accaactccgcaggcaacaccacggcgactgcagtgctcaacgtgtcctcatccgactcc
agcaacccctacagcttcttcaccaccgtcactgttgaaaccgtggaaacaaacaatggt
gaggatgctgggaggcagtacatcaacgaaacctacgtaccaccagattacctgggtccc
actttttcaggaggggtactgggtaaaggcagggctggattcaccatatctccatctcgc
tcttctctccactctttctccccgcgtgccaccagaaacactgaaaatacagtcacagtg
tcgataatggatgtcacaaacattactggcctggacgacgtgatgaagaccaccaagatc
attattggctgctttgtggccatcaccttcatggcagccgtgatgcttgtggtcttctac
aagctgaggaaacagcaccagctgcacaagcaccatggccccacccgcgctattgagatc
atcaacgtggaagacgagattggtgccggggccgggagcggcatctcagggggatcgacc
atgcaatctgggtgcggaggagacggaacattgaggatgcatcacccggaaatagtcaac
cttcccaacattgggcgatcagagcatcttaaccattactacaaggccaatcatttcaac
aacaatgtgatgggtctgagcattgggacaggggcaggagtcggtactctaagcaacaag
aacaatatgtctccacttaaccagcaaggccaggatatcccaatctcctgtacacaggtt
ccaatcccctccgccactttccagaccatgtctggaaatggcaccaacaccaaccctctt
tctgtttccccacctctgccaatgtccctccccatgccccccatgggattacatggatcg
atcaagggtttcatgggccagaaccagaacccacaaatggaacctcttctgttcaaggga
aactcaaaggaaaacgttcaagagactcaaatttga
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