Oncorhynchus mykiss (rainbow trout): 110498823
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Entry
110498823 CDS
T07259
Symbol
tdrd1
Name
(RefSeq) tudor domain-containing protein 1 isoform X1
KO
K18405
tudor domain-containing protein 1/4/6/7
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omy03036
]
110498823 (tdrd1)
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Gene silencing
piRNA pathway
110498823 (tdrd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
SMN_Tudor
zf-MYND
Agenet
Docking
MYND_ZMYND11_ZMYD8
Motif
Other DBs
NCBI-GeneID:
110498823
NCBI-ProteinID:
XP_021431141
Ensembl:
ENSOMYG00000008560
LinkDB
All DBs
Position
20:complement(3095894..3183859)
Genome browser
AA seq
1218 aa
AA seq
DB search
MIMNRGSFQNVMQPNMPLRRPSTSPAGATATPRVPGSTPDRPLAISNGDAEASRKETTVL
TNGSMKTASMPPFTVKLCNYCSQQGNLRCTRCKKTCYCSVACQSEDWNAHRHMCKPSTPD
TPTSDKPKEIPASPMGNGQNLSDSKVNNGDVTCSQRVYLRDLRKNDITKGMEIQVSVVEL
HSPGRFFIHVQSPELVEALRAVTVELQKTNGGSLGTDYKPDTGEVCAVKYSLDQNWYRGV
VQSVAADDGNAKVLYIDFGNEEDVTLDRIKPLAASIEPIPPCALECSVAGVTPVTDSWMG
VCCIAVRQLVAGKSLTLTVVDTPENDRTYAVDILLTPIGTVSQEGYGKQLSTFLMDQGYA
VREDVNKKRAEQDVDSLVSASLENFRRQSGGKNENMEAQPPDPLTQGLGDTFAAMVTHLQ
SPYDIICQKLDNASVIQELHLKLRDHCSQAPASQNFRPAPGTVCCSLFYEDNQWYRAKVL
AYSSEEKVCVGYIDFGNSEEVELSRLCSISSELLALPMQAIPCALAGVRPTAEVWSEETV
LMLRRMVCNRFLRVEILGEREGMALVAMIDEASDPQGNVAEMLVATGYALPSNHQDEEPT
TKGQAEGAWIESSHVAKPAVAEKLQWTCAELPTEGQMVALVVSVMENPGEFYCYKYNQED
LQVLAELGAELKRHCEADITPFTPSVGEPCCALFSGDGAWYRGMVQGVWAGSKARVYFVD
YGNTSDVEQAHLRAITPGLLKHHFLAIRCWLAGVEPLSPQWSAESIVRFQALCVGQQLHA
RVLFITERGYGLQLDSSGQNVATTLLSEQLAKAPGQSQALAKSVPTVPKIPQQKPAIQRD
TTTSVGPPKPAAANENEPPTEKQVKKNNQSKASARQPVSIPFGSDGTASADKFPLDWRTV
ELPRNETFQPCIAAVVSPSLFYLFNPSHVYVERLKSVMMDLAVYCTTKALPSRCKPIPGA
ACCAQFSGDKNWYRAVFLETTETEASVIYADYGNSEKLPFASILPIPTEFLELPFQIARC
ALTGKEHFPSVWPVEVLELFSALLSDGVLASVQDFDGNSNLLSVTLQIERGGGHLNTMIL
EGLQSTQTGSAKTRRQEPGKTKTPIIATARVTPATAPVTPATAPVTPATAPVTPATAPVT
PATAPVTPATAPVTPATAPVTDYAAPTNIEPKEPQSLICSKSVNDYASPCCCRDLVQKID
QLEEHILFLMEKIGGLSK
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgatcatgaaccgtggatctttccaaaacgtgatgcaacccaacatgcctttgaggagg
ccgtcaaccagcccagcaggtgccactgcaaccccaagggtccctggctcaacaccagac
cggcctctagcgatctccaacggggatgccgaggccagccgaaaagaaaccactgtactc
acaaacggctctatgaaaacagcctctatgcccccattcactgttaagttgtgcaactac
tgcagtcagcaaggtaaccttcgctgtacgcgctgcaagaagacctgctactgctcagtg
gcttgccagtcagaggactggaatgcacacaggcacatgtgcaagcccagtaccccagat
actcccacaagtgataagccaaaggaaatcccagcttcaccgatgggaaatgggcagaac
ctgtcagactccaaggtgaacaacggtgatgtgacttgctcccagcgagtgtacctgcgg
gacctccgtaagaatgacatcaccaaaggaatggaaattcaggtgtctgtggtggagctg
catagccctggtaggtttttcattcacgtccaaagcccagagctggttgaggctctgaga
gccgttactgtggaactgcagaagaccaacggtggctcgctagggacagactacaagccc
gacaccggagaggtctgtgccgtcaaatactccttggatcagaactggtacagaggtgtt
gtccagtctgtagctgcagatgatggaaatgctaaagttctctacattgactttggaaat
gaagaagatgtgacactggatcggatcaagcccctcgctgccagcattgaacccattcca
ccatgtgctttggagtgcagcgtcgccggggtaacaccggtgactgacagctggatgggg
gtgtgttgcatagctgtgagacagctggtggctggaaagagcctgacactcactgtggtg
gacacaccggagaatgaccgcacctacgcagtggacatcctgctgactcctatcggtact
gtatcacaggaaggctatggaaaacagctgagcactttcctcatggaccaaggttatgct
gtgagggaggacgtcaataagaaacgcgcagaacaggacgttgactccctagtgagtgcg
tccctggaaaacttccgccgccagtcggggggtaagaacgagaacatggaggcacagcca
cctgaccctctgacccagggactgggagacaccttcgctgccatggtgacgcacctgcag
tcaccttatgacatcatctgtcagaaactggacaacgccagtgtgatccaggagctgcat
ctgaaactgagagaccactgctctcaggccccagccagccaaaacttcagacctgcccct
ggcacagtgtgctgctccctattctatgaggacaaccagtggtacagggccaaagtgctg
gcctactcatctgaagagaaggtgtgtgtaggctacattgactttggcaactcagaggag
gtggagctgagtcgcctgtgttctatcagctctgaactcctagccctgccaatgcaggcc
atcccttgtgccctggcaggagtgcgtcccacagcagaggtctggtcagaggagactgtg
ctgatgctcaggcggatggtgtgcaaccgattcctgcgggtagagatcctgggcgagcgg
gagggtatggcgctggtggccatgatcgacgaggccagcgacccccagggcaatgtggct
gagatgctggtcgccacaggttatgccttgccttccaaccatcaggacgaagagcccacc
acgaaggggcaggcggaaggagcctggatagaatcatctcatgtggccaagcctgctgtg
gcagagaagctacagtggacatgtgctgagcttcctactgagggccagatggtggcactg
gtggtcagtgtgatggagaatcctggagagttctactgctacaaatataaccaagaagac
ctgcaggttctagcggagctgggggctgagctgaagcggcactgtgaggcagacatcacc
cctttcacccctagtgtgggcgagccctgctgcgctctgttctctggagatggggcatgg
taccgtggtatggtgcagggtgtgtgggctggcagtaaagcccgggtgtattttgtggac
tatggcaacaccagtgatgtcgaacaagcccacctcagagcgatcacccccgggctcctc
aaacaccacttcctggctatccgctgctggctagcaggtgttgagcctctgagcccccag
tggagtgctgagtctatagtccgcttccaggccctgtgtgtgggccagcagctccatgca
cgtgtcctcttcatcacagagcgaggctacggacttcaactggacagcagtggtcaaaac
gtggccaccacactgctctcagaacagctggccaaagcccctggacagagccaggccctt
gctaaatccgttcccactgtccctaaaatcccccagcagaagcctgccattcagagagac
accaccactagtgtgggaccacccaaacccgcagccgccaatgaaaatgagccgcccact
gagaagcaggtcaagaaaaacaatcagagcaaggctagtgctcggcagccggtgtccatc
ccatttggatccgatggaactgcatctgcagacaaattccctctggactggagaacggtg
gagctgcctcgcaatgagaccttccagccttgcatagcagccgttgtcagccccagtcta
ttctaccttttcaaccccagccatgtgtatgtggagagactgaagagtgtgatgatggac
ttggctgtatactgcaccaccaaggccttgcctagtcggtgcaaacccattccaggagct
gcatgctgtgcccagttttcaggtgataagaattggtacagagccgtgttcctggagacc
acagagactgaggccagtgttatctatgctgactacggcaactccgagaagctccccttc
gccagcattctgcccatccccacagagttcctggagctccctttccagattgcccgctgt
gccctcacaggtaaggagcatttcccgtcagtgtggcccgtagaggtcctggagcttttc
agtgccctgctgagtgacggcgtgctggcctctgtccaggactttgatggcaactccaac
ctgctgtcagtcaccctccaaatagagcgaggcgggggccacctcaacactatgatccta
gagggcctgcagagcacacaaactggcagcgccaagacccgcagacaggagccaggcaag
accaagacccccatcatcgccacagctcgagtcacgccggccacagctccagtcacgccg
gccacagctccagtcacgccggccacagctccagtcacgccggccacagctccagtcacg
ccggccacagctccagtcacgccggccacagctccagtcacgccggccacagctccagta
actgattatgctgccccgacgaatattgaacccaaggaaccacagagcctaatttgctca
aaaagtgtgaatgattatgcctctccatgctgctgccgggacttggtgcaaaagattgat
caactggaagagcacattctgttcctcatggagaaaataggtggattgtcaaagtga
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