Oncorhynchus mykiss (rainbow trout): 110498858
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Entry
110498858 CDS
T07259
Name
(RefSeq) GATOR complex protein WDR24 isoform X1
KO
K20408
SEA/GATOR complex protein SEA2/WDR24
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
110498858
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110498858
Membrane trafficking [BR:
omy04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
110498858
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR5
WD40_Prp19
Beta-prop_WDR3_1st
WD40
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_WDR36-Utp21_1st
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WDR55
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
MIOS_WD40
WD40_RFWD3
Beta-prop_Aladin
Beta-prop_WDR19_1st
ANAPC4_WD40
Beta-prop_HPS5
zf-RING_16
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
110498858
NCBI-ProteinID:
XP_021431196
Ensembl:
ENSOMYG00000018447
LinkDB
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Position
20:complement(6363906..6374429)
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AA seq
793 aa
AA seq
DB search
MEKMSRVTTALGSSAISGRTMFCHLDAPANAISVCRDATQVVVAGRNIFKIYGLEEEQFV
EKLNLRVGRKPSLNFSCADVMWHQMEENLLATAATNGAVVTWNLGKPSRNKQDQLFTEHK
RTVNKVCFHPTEVYMLLSGSQDGYMKCFDLRKKESVSTFSGQSESVRDVQFSMKDYFTFA
ASFENGNVQLWDIRRPDRYERMFTAHTGPVFCCDWHPDDRGWLATGGRDKMVKVWDMTTN
RAKEIYCVQTIASVARVKWRPERKWHLATCSMMVDHNIYVWDIRRPFIPFATFEEHKDVT
TGIVWRHQHDPYFLLSGSKDSTLYQHMFKDASRPVDRANPEGLCFGLFGDLAFAAKESLI
SGDANRKPYPGGDRRYPIFFFKKPDLTEQFAHVSSALSVFESSLESKRMDWFVKTARLYL
LSGKSFAELCDHNAKVAKELNRPQVSTTWTMLRIMFSDPANLSTPGPNHIGKLGTLPLMN
SFSMKEMGMGTESRLDRSKGESRQDNIHLELGNSLINSNNDDICPTAENEETEGSEGQAE
YMFGDAELDDDDLYSMEHDNQAAEEQEYTLPQEAFPLRHEIMDNPLAPEHLQQDKADSPQ
ASGNEAEVMCLTPIESFSLISISQPLFSPHLPAPFFCPVVREMLSHYAEQGDVQMAVSVL
IVLGDRIRKEIDDLTQEHWYMSYIDLLQRFELWNVSNEVIKLSTCSAITCLNQTSTTLHV
NCSNCKRPMSNRGWICDRCHQCASVCAVCHHVVKGLFVWCQGCSHGGHLEHVKNWLKSSS
HCPAGCGHLCEYT
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atggagaagatgtctcgggtcactacggccctaggcagcagcgccatcagcgggcgcacc
atgttctgccacctggacgcgcctgccaacgccatcagtgtgtgccgcgatgccacacag
gtggtggtggctggccgcaatatcttcaagatctacggcctggaggaggagcagtttgtg
gagaagctcaacctgcgcgtgggccgcaagccctcgctcaacttcagctgcgccgacgtc
atgtggcaccagatggaggagaacctgctggccacggctgccaccaacggggctgtagtc
acctggaacctgggcaaaccgtcgcgcaacaagcaggaccagctgttcaccgagcacaag
cgcacagtcaataaggtgtgcttccaccccaccgaagtctacatgctgcttagtggctcc
caggacggctacatgaagtgcttcgacctgcgcaagaaagagtctgtcagcaccttctca
ggtcagtcagagagtgtaagagatgttcagttcagcatgaaggattactttactttcgct
gcttcctttgagaatggtaatgtccagctgtgggacatacggaggccagaccggtatgag
aggatgttcacagcccacaccggacctgtgttttgctgtgactggcaccccgatgacagg
ggctggctggccactggtggccgggacaagatggtgaaggtgtgggacatgaccaccaac
cgggccaaggagatctattgcgtccagactatcgcctcggtggcccgggtcaagtggcgt
cctgagaggaagtggcacctggccacctgctccatgatggtggaccacaacatctatgtg
tgggacatccggaggcccttcatcccctttgccaccttcgaggagcacaaggacgtgacc
acaggtattgtgtggcgccaccagcacgacccctacttcctattgtcaggttccaaggac
agcacgctctaccagcacatgttcaaggatgccagccggcccgtggaccgggccaaccct
gagggactgtgcttcggcctgtttggcgaccttgccttcgctgccaaggagagcctcatc
agtggcgacgccaacaggaagccgtacccgggtggtgaccgccgctaccccatcttcttc
ttcaaaaagcccgacctgacggagcagtttgctcacgtgtccagcgccctcagcgtgttt
gagtcgtctttggagagcaagcgcatggactggtttgtcaagacggcacgcctctacctc
ctcagcggcaaatcctttgccgagctgtgtgaccacaatgccaaggtggccaaggagctc
aacagacctcaggtttccactacatggacgatgcttcggatcatgttctcagacccagcg
aacctctcaacgccgggtccaaatcacattggcaaactgggcacccttcctttaatgaac
agtttcagtatgaaggagatgggcatggggacggagagcaggctggaccgcagtaaagga
gagagcagacaggacaatattcacctagagcttgggaactcgctaatcaacagcaacaat
gacgatatttgtcccactgcagaaaatgaagagaccgagggaagtgagggccaggcggag
tacatgtttggtgatgctgagctggacgacgatgacctctactcaatggagcatgacaac
caggccgcggaggagcaggagtacacgctcccccaggaggccttcccactgcgccacgag
atcatggacaacccgttggcgccggagcacctgcagcaggacaaggccgactcgccgcaa
gccagcggcaacgaggcagaggtcatgtgcttgacgcccatcgagtccttctccctgatc
tcaatttcccagccactgttcagcccccatcttcctgcccccttcttctgccctgtggtc
agggagatgctgagccattatgccgagcagggcgacgtgcagatggctgtctcggtgctc
attgtcctgggagaccgcatccgcaaggagatcgacgacctcactcaggagcactggtac
atgtcctacattgacttgctgcagcgcttcgagctgtggaacgtgtccaacgaggtcatc
aagctgagcacttgcagcgccatcacctgtctgaaccagacatccaccactctgcatgtc
aactgcagcaactgcaaacggcccatgagcaacaggggctggatctgtgacagatgccac
cagtgtgccagcgtttgtgctgtgtgccaccacgtggtgaaggggctgtttgtgtggtgc
cagggctgcagtcacggcgggcacttggagcacgtgaagaactggctaaagagcagttcc
cactgcccggccggctgcggtcacctgtgtgagtacacctga
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