KEGG   Oncorhynchus mykiss (rainbow trout): 110498861
Entry
110498861         CDS       T07259                                 
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC5 isoform X1
  KO
K14721  DNA-directed RNA polymerase III subunit RPC5
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy03020  RNA polymerase
omy04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:omy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    110498861
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    110498861
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:omy03021]
    110498861
Transcription machinery [BR:omy03021]
 Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Pol III specific subunits
     110498861
SSDB
Motif
Pfam: RPC5 RPC5_C
Other DBs
NCBI-GeneID: 110498861
NCBI-ProteinID: XP_021431205
Ensembl: ENSOMYG00000018552
UniProt: A0A8C7QQD1
LinkDB
Position
20:6498326..6512527
AA seq 702 aa
MASEEDDDPIIQEIDVYLAKSLADKLYLFQYPVRPSSMTYDDVTHLSAKIKPKQQKVELE
MAINTLSPNYCRSKGEQIALNVDGTTSEDSNTYSVKMMDKQTFTSIQSTTNTSRYAAAVF
RKGELHITPLQGILQMRPSFSYLDKADGKHREREAANEGGDSSQDEVEEDVKAVTVRFSR
PESDQARQRRIQSYDFLQKKQAEEPWVYLHYHGLNDGRSDHERQYLYCQAMGGSENTELV
KTPKEYLAMLMPPITEEKIVRPVGPSNVLSMAQLRTLPLGDQVKTLLKNVKVIPFANLMG
LLTPGTDSTAVLRCIQQVALLVQGNWVVKSDVLYPKNSCSPHSGVPAEVLCRGRDFVMWR
FTQERSVMRKEVTAIIKLLPEDVKDFLEHMAVPRINRGWEFLLPSDSDFIKKHPDVAQRQ
HMLWIGIQTKLEKVFNFSKEDLVSKKDPQTEAMHVSGEQRLKAAHERARQNQPSHQKDLS
ARRQGKGGAGPSGGAAVRVKEEPVSDGEDEPMDTSSSSSALPNGLVNGYPSAATSAALNP
HNGHGGTPTPSPSPELRDFVWNMFRKQHVLTLSEVKRLFNLHLASLPPGDSLFHSISDRL
LQDTILMSHCKQILVPFPAQSTAAADEQKVFAVWETGETFDKHRQVLYEIFMKNYRVRRN
VIQTRLTQEMGDQVTKDDVDRLLKECCVSFGGMWYLKGTLQS
NT seq 2109 nt   +upstreamnt  +downstreamnt
atggccagtgaggaggacgatgaccccatcatacaagagattgatgtatacctagctaaa
agccttgcggacaagctatatctgttccagtatccagtacgcccttcctctatgacctat
gatgatgtcactcatctatctgccaagatcaagcccaagcagcagaaggtggagttggag
atggccattaacactctgagtcctaactactgtcgaagtaaaggagagcagatcgccctc
aacgtggacggaaccacctcagaggactccaacacctactctgtgaagatgatggacaaa
cagacgttcacatccatccagtccacaaccaacacctccagatacgctgctgctgtcttc
aggaaaggggagctccacatcacaccgctgcagggtatccttcagatgcgacccagcttc
tcctatctggataaggctgacggcaaacacagagagcgggaggccgctaacgaaggggga
gactcttctcaggatgaggtggaggaagacgtcaaggccgtcactgtgaggttttcccgt
cctgagtcggaccaggctcgtcagcggcgtatccagtcgtacgacttccttcagaagaaa
caggcagaggagccctgggtctacctgcactaccacggcctcaacgatggccgttcggac
cacgagaggcaatacctgtactgccaggccatgggaggctctgagaacacagaactggta
aaaacaccaaaggagtacctggcaatgctcatgccccctatcacagaggagaagattgtg
aggcccgtaggtcccagtaacgtgctgtccatggcccagctccggaccctgccgctaggt
gaccaggtcaaaaccctgttgaagaacgtcaaagtgataccgtttgccaacctgatgggt
ttgttgacccctgggacagactccactgcagtgctgcgctgcatccagcaggtggcgcta
ctggtgcagggcaactgggtggtcaagagtgatgtgctgtatcctaagaacagctgtagt
ccccacagtggtgtgcctgctgaggtgctgtgtcgaggaagagactttgtgatgtggaga
ttcactcaggagcgctcagtgatgaggaaggaggtcacagccatcatcaagctcctgccg
gaggatgtgaaggacttcttggaacacatggcggtgcctcgtataaaccgtggctgggag
ttcctgttgccaagcgacagtgacttcatcaaaaagcaccctgacgtggcccagcggcag
cacatgctgtggattgggatacagaccaaattggagaaggtcttcaacttctctaaggag
gacctggtatccaaaaaggacccacaaacagaagctatgcacgtgagtggcgagcagcgt
ctgaaggcagcccatgagcgtgcacgacagaaccagccctctcatcagaaggacctgagc
gctcgtcgacagggaaagggtggagccggaccgagcggtggagccgcggtcagagtcaaa
gaggaacctgtcagcgacggtgaagacgaacccatggacacatcctcttcctcctccgct
ctccctaacgggttggtaaacggttacccatccgccgccacttccgctgccttgaatcct
cataacgggcacggcgggactcccacgccctcaccgtcacctgagctgagggactttgtg
tggaacatgttcaggaagcagcatgtgctgacgctgagcgaagtcaagaggctgttcaac
ctccacctggcctccctgcctcccggagacagcctgttccactccatctcagaccgcctg
ctacaggatactatactgatgagccactgcaaacagatactggtgccttttccagcccag
agcacagcagctgctgatgagcagaaggtgtttgctgtgtgggagacaggagagaccttc
gacaagcatcgtcaggtcctgtatgagatcttcatgaagaactaccgggtgaggaggaac
gtgatccagaccaggctgacgcaggagatgggagaccaggttaccaaggatgatgtggac
cgcctgcttaaggagtgctgtgtgagctttggagggatgtggtacctcaagggtacccta
cagtcctga

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