Oncorhynchus mykiss (rainbow trout): 110498877
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Entry
110498877 CDS
T07259
Symbol
ppfibp2b
Name
(RefSeq) liprin-beta-2b isoform X1
KO
K27096
liprin-beta
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110498877 (ppfibp2b)
Membrane trafficking [BR:
omy04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
110498877 (ppfibp2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
SAM_PNT
PUMA_CC
FxsA
WHEP-TRS
Motif
Other DBs
NCBI-GeneID:
110498877
NCBI-ProteinID:
XP_036814135
LinkDB
All DBs
Position
2:complement(87366163..87492584)
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AA seq
1026 aa
AA seq
DB search
MASDASHMLEAALEQMDDIIAGSKAAAEYTNGLFELGSPGSAGPLQVLQLVEDLRLALEL
QPREEERNTLRAQVPSSTAHMLMDWLDMDRGSDRGSVNLRSPVNNESYQERLVRLEGDKE
FLVLQVSVLTDQVEAQGEKIRDLESSLEEHHHKLNSTEEMLQQELLSRNSLETQKLDLMD
EVSYLKLKLVGMDEKQNHNDSSKDQQNKAECVVNLISELQEQMCRFQEEIHTRIMEKRAM
EAQGESGAREAHDQSPDVGLGGTDMEEFCCRCGGQNGLLQELRLLKSKVDVLEGEKLQYE
RKLKATKVEIADLQQILASKDSEIEGLQSQLVSRGPMTNENPERVEVFRRLLTDQYQEFQ
RLKMGMESLLAANDEKDRHIEELTVLLRQYRKMKEVMALAQVTSEKLLVGSSEEELSGSL
KMRALTHKAHSDIIRSEMSSRCSSPLLRSSSSFQKELNSSIQTSLETSMVMVSPSDAGCF
HNGQWSQPQMLSSSLEELQSRSLPKHVVGQPVEAVSENRHMEMNKYQTLPGKLSRPDMNG
DQEQYAAPVQLSPDDSEDSELNLRKSERLDESTQSDLSPLSSGVDSGKQSPVSPENKKNH
LGIKKLWGKIRRTQSGTLQREDLEPGEFKRGGLRATASPRLARTGETLTSVWDLKTPFSK
WTPEQVCCWLEESGLDQYVILAQHWANSGQTLLSASPQDLEKEMGIKNPLHRKKLQLALK
SFSTKTTEKSSELDHIWVTRWLDDIGLPQYKGQFHEGRVDGRMIQYLTVNDLLFLKVTSQ
LHHLSVKCAIHVLHVNKFNPNCLKRRPGDENKTSPSEVVQWSNHRVMEWLRSVDLAEYAP
NLRGSGVHGGLIILEPRFNSDTLAMLLNIPPQKTLLRRHLATNFNMLVGSQAQQEKREFM
ESLGYAPLSTTAKVRPKKLGFSNFGHLRKKRCDESTDYICPLEAAQVQAVLNGAHRPYSG
FRGLSPILDRDPDRRQQMAVTEGPVLQIEALSEGINQLTGSREERGAGAVPNIKDRPILV
IRETTL
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atggcctcagatgcaagccacatgttggaggcggccttggagcaaatggatgacatcatt
gcaggctccaaggctgcagccgagtacaccaacggcctgtttgagctgggctctccaggt
agcgcagggcccctgcaggttctacagctggttgaggacctgaggctggccctggagctg
cagcccagagaggaggagaggaacaccctgagggcccaggtccccagcagcactgctcac
atgctcatggactggctggacatggacaggggctcagacaggggctcggttaaccttcgc
tccccggtgaacaatgagagctatcaggagcgtctggttcgcctagagggggacaaagag
tttctggttctccaggtaagcgtgctcacagaccaggtggaggcccaaggagagaagatc
cgagacctggagagctctctggaggagcaccaccacaaactcaactccactgaggaaatg
ctacagcaggagctgctgagccggaactcattggagacccagaaactagatctgatggat
gaggtttcctacctgaaactgaagctggtcggcatggacgagaaacagaaccacaacgac
agcagcaaggaccagcagaacaaagctgagtgtgtggtaaatctgataagcgagctccag
gagcagatgtgtaggtttcaggaagagatccacacccgcatcatggagaaacgggccatg
gaggcccagggggagagtggtgcccgcgaggcccacgaccagagccctgacgtgggcttg
ggtggcactgacatggaggagttttgctgtcgctgtggaggacagaatggcttactgcaa
gaactcaggctcctcaagagtaaagtggatgtgctggagggggagaaattgcagtatgag
agaaaactaaaggccacgaaggtggagatagcagacttacagcagatactggcttccaaa
gactctgagatcgagggccttcagagccagctggtctccagaggcccaatgaccaatgag
aatccagagagagtggaggtctttaggagactgctgacagaccaataccaagaattccaa
aggttgaaaatggggatggagtcgttgttagcggcaaatgatgagaaagaccgtcacata
gaggagctcactgttctcctgagacagtacaggaagatgaaggaggtgatggccctcgca
caagtgaccagtgagaagctccttgtggggagcagtgaggaggaactgagcgggagtctg
aagatgagagctctcacacataaagctcattcagacatcatccgttcagagatgtcttcc
aggtgctcctctcctctgttaaggtcttcctcatccttccagaaagagctgaactctagt
atccagacctccctggagacgtccatggtgatggtctccccgagcgatgctggctgcttc
cacaacggacaatggtcccaaccacagatgctttcaagcagcctggaggagttacaaagc
agatcgttaccaaagcatgtagtgggtcaaccagttgaagcggtttcagagaatcggcac
atggaaatgaacaaatatcagaccctaccagggaagctatctcgacctgacatgaatggg
gatcaagagcagtatgccgcaccagtccagctgtcccctgacgatagcgaggacagtgag
ttgaacctaagaaagtcggagagactggatgagtccacgcagtcggacctgtcccccctg
tcgtctggagtggactcaggaaagcagtctcctgtctccccagagaacaagaagaaccac
ctgggcatcaagaaactctgggggaagattcggaggacccagtctggcaccctgcagaga
gaggaccttgagcctggagagtttaagagggggggactgagagccaccgccagccctcgt
ctggcccggactggagagacattgacctctgtgtgggatttgaagacacccttctccaag
tggactccggagcaggtctgttgctggctagaggagagtgggctggaccagtatgtgatt
ctggcccaacattgggccaatagtgggcagaccctcctctccgcctcaccacaggactta
gagaaggaaatgggtattaagaatccactgcacaggaagaagttgcagttggccctcaag
tccttcagcaccaaaacgactgagaaatcctctgaactggaccacatctgggtcacacgt
tggcttgatgacattggtttacctcaatacaagggtcagtttcacgagggaagagtggac
ggcagaatgattcagtacttgacagtgaatgacctcttgttcctgaaagtgaccagtcag
ctccatcatctcagtgtgaagtgtgctatccacgtcctccacgtcaacaagttcaacccc
aactgcctgaagagaagacctggagatgagaacaagacttctccctcggaggtggttcag
tggtcgaaccacagggtgatggagtggcttcgctcagtggacctggcggaatacgcaccc
aacctgaggggcagcggtgtgcacgggggcctcatcattctggagcctcgttttaactca
gataccctggcaatgctgctgaacatcccccctcagaagaccctgctgcgacgtcacctg
gccaccaacttcaacatgctggtgggctcccaggctcagcaggagaagagggagttcatg
gagtctttaggctatgctccgctcagcaccacagccaaagtcaggccaaagaagttgggc
ttctcaaacttcggccacctgaggaagaagaggtgtgacgagtcaacagactacatttgc
cccctggaggcggcccaggttcaggcggtgctgaacggggcccaccggccctactccggc
ttcaggggcctcagccccatcctagacagagacccagacagacggcagcagatggcggtg
acagaggggcccgtgctgcagatagaagctctgtctgagggaattaaccaactcacgggt
tccagagaagaaagaggggctggagctgttccaaacatcaaagacagacccatactggtt
ataagggaaaccaccctctga
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