Oncorhynchus mykiss (rainbow trout): 110498929
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Entry
110498929 CDS
T07259
Name
(RefSeq) LLGL scribble cell polarity complex component 2 isoform X1
KO
K06094
lethal(2) giant larvae protein
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
110498929
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110498929
Membrane trafficking [BR:
omy04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
110498929
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
Beta-prop_EML_2
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_IFT140_1st
PLN_propep
Motif
Other DBs
NCBI-GeneID:
110498929
NCBI-ProteinID:
XP_021431330
Ensembl:
ENSOMYG00000014641
UniProt:
A0A8C7Q240
LinkDB
All DBs
Position
20:9335133..9359628
Genome browser
AA seq
1011 aa
AA seq
DB search
MKRFRRHGQESQRERIKQELYGFNKTVEHGFPHQPSALGFSPSLQLLAIGTRSGAIKLYG
GPGVEFMGLHDENAAVTQVHFLPHQVELVTLLDDNSLHMWTLRAHHGVSELLEIGRFTLT
GPPGAPPSVTRVTAVLAHSSGDLLLLGTEGGHVFIVKVPGFRELEERNISLEKVTNSVPE
EYGGRRSLEHVESLQENPVNPRQVLIGYGRGLMVVWDLDSQSAVKHIPATQQLESVWWTE
DGGHVLSSHSDGSYCRWKVAGDDPQSEQEKSEVPYGHFPCKAISKIIQLPTEQGPPFLFL
SGGMPRASYGDRHCISVIHSKTHVALDFTSRIIDFFVIRDGPDHTGEPSALVVLVEEELV
VIDLQTEGWPVIQTPYLVPLHCSAITCSHHVSAIPLKLWERVLSAGALQNTHYSKKPWPM
TGGQNLAPDPPQRDLLLTGHEDGTVRFWDASGVCLYPMYKLSTAGVFLTDSDPNDNLNQG
TEGEWPPFRKVGCFDPYSDDPRLGIQKIHLCKYSGYLTVAGTAGQILVLELNDEAAEQTV
EATVADLLQGQEGFRWKGHTRLEVREEPVTFPPGFQPFALVQCQPPAVVTALTLHSEWKL
VTFGTSHGFGLYDYQQKNNVLVRCTLNPSDQLAMEGPLSRVKSIKKSLRQSFRRIRRSRV
SLRKHHVNNAAKLQQANARLEAELAEMELAPVQRKIEPRSPDDSFTGLVRTLYFADTFLS
DSSHNTPSLWAGTNGGSVFAYQLRLPPVERRGEDPVTAHPAKEIQLMHRAPVVGILVLDG
HGSPLPEPLEVAHDLARSPDMQGSHSLLVISEEQFKVFTLPKVSAKMKLKLTAIDGSRVR
RVGVAWFGSTRTDDYGESGLTVLTNQGDLHVVSLPGVKLQVQYPCIRREDVSGIASCVFT
KHGQGFYLISPSEFERFSLSARCVVEPRSLVEVSSQTPSSTLPRAPPDGASVERRNSTRD
GAESSARRVMEHALLNDETVLQEIQKSLEVDQTTFLENGTSALAGGKVLSS
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggtttaggagacatggccaggagtcccaaagagagcggatcaaacaggagctc
tatgggttcaacaagacagtggagcatggttttcctcaccagcccagtgccctgggcttc
agccccagtctccagctcctggccatcggcacacgctccggagccatcaaactttacggt
ggcccaggtgtggagttcatgggtctacacgatgagaacgctgccgtcacacaggtccac
ttcctgccacaccaggtggagctggtgactctgttggatgacaacagtctccacatgtgg
accctcagagctcaccatggtgtctctgagctgctggagataggacgcttcacactcact
ggacccccgggtgctccccccagtgtaactcgtgtaacagcggtgctagcccactcttct
ggggacctgctgttgcttggaacagagggaggacatgtgttcatagtgaaggtaccaggc
ttcagagaactagaggagaggaacatcagcctggagaaagtcaccaacagtgtaccagag
gagtacggaggtcgtaggagcctggagcatgtcgagtccttacaggagaatcccgtcaac
ccacgccaggttctgattggatacggacgaggcctcatggtcgtctgggacctggatagc
caatcagccgtcaaacacatccccgctacacagcaactggagagcgtgtggtggacggag
gacggtggccatgttctcagttcccatagcgatggcagctactgccgctggaaggtggct
ggggatgacccacagagcgagcaggagaagtccgaagtaccgtacggccacttcccctgt
aaggccatctctaaaatcatccagctgccgacagaacaggggcccccgttcctgttcctc
agtggcggcatgccccgggccagctacggtgacagacactgtatcagtgtgatccacagt
aaaacacacgtggctctggacttcacctccagaatcatcgacttcttcgtcatcagagac
ggaccagaccatacaggcgaacccagtgcattggtggtcttagtagaagaggagttggta
gtaatagatctccagactgaagggtggccggtcatccagactccgtacctggtgcctctc
cactgctcggccatcacctgctcccaccatgtctctgctatacccctgaagctgtgggag
agggtcctgtctgccggagcattgcagaacacacactactctaagaagccgtggcctatg
acaggaggacagaacctggccccagacccccctcagagagacttactgctcacagggcac
gaggacggtacggtgcgtttctgggacgcgtcgggggtgtgtctgtaccccatgtacaag
ctgagcacggcaggggtgttcctcactgactcggaccccaatgacaacctgaaccagggc
acagagggagagtggccacctttcagaaaggtgggttgttttgacccgtacagtgacgac
cctcgtcttggcattcagaagatccacctgtgtaaatacagcggctacctgactgtagct
ggcactgctggacagatcctggtgttagagctgaatgatgaggcagcagaacagactgtg
gaggccaccgtagcagacctgctacagggacaggagggcttccgctggaagggccacacg
cgtctggaggtgagggaggagccggtgaccttccccccaggtttccagccctttgccctg
gtccagtgccagcctccggccgtggtcactgccctcaccctgcactctgagtggaaacta
gtaacattcgggaccagccacggctttggactctacgactaccagcagaaaaacaacgtt
ctcgtcaggtgtactctgaaccccagtgaccagctggctatggaaggtcctctgtccaga
gtgaagagcattaagaagtctctccgtcagtccttcagaaggatcaggcgcagccgagtg
tccctacgcaaacaccatgtcaacaacgcagctaagttgcagcaggccaatgctcgtcta
gaggcggagctagctgagatggagttggcgcccgtccagagaaagatagagcctcgatcc
cctgacgactccttcaccggcctcgtgcgcacgctatacttcgctgataccttcctttca
gacagctcccacaacacaccatctctgtgggcagggaccaatgggggatcagtattcgcc
taccagctccgcctaccgcctgtggaacgcagaggagaggaccctgtcacagcacaccct
gctaaggagatccagttgatgcaccgtgctccagtagtgggcatcttggtgttggacggc
catggttcccctctgcctgagcccctggaggtggcacacgacctggcccgctcacctgac
atgcagggttcacacagcctactggttatatcagaggaacagttcaaggtgttcaccctg
cctaaggtgagcgccaaaatgaagttaaagttgacggccattgacggctcacgcgtgcgc
cgggtgggcgtggcctggttcgggagcacccgcacggacgactacggcgagagcggcctc
accgtcctgaccaatcagggagacctccacgtggtgtcgttgccaggggtgaaattgcag
gtccagtacccctgtatacgtagggaggacgtcagcggcattgcatcctgcgtcttcacc
aagcatggacagggtttctacctgatctctccgtcagagtttgagcgtttctctctgtct
gctcgctgtgtggtggagccccggtctctagtggaggtgtcctcccagacacccagcagc
actctgccacgggcgccgccggacggggcctctgtggaacgcagaaattccacgagggat
ggcgcggagagctctgctagacgtgtgatggagcatgctttgctgaatgacgagactgtg
cttcaggagatccagaagtctctagaagtagatcagacgacgttcctggagaatgggacg
agtgctctcgctggagggaaggtgctgagcagttga
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