Oncorhynchus mykiss (rainbow trout): 110498936
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Entry
110498936 CDS
T07259
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04020
Calcium signaling pathway
omy04080
Neuroactive ligand-receptor interaction
omy04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
110498936
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
110498936
04082 Neuroactive ligand signaling
110498936
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
omy04040
]
110498936
Ion channels [BR:
omy04040
]
Ligand-gated channels
Glutamate (ionotropic)
110498936
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
NMDAR2_C
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
110498936
NCBI-ProteinID:
XP_036811430
Ensembl:
ENSOMYG00000017996
LinkDB
All DBs
Position
20:complement(10609747..10668872)
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AA seq
1272 aa
AA seq
DB search
MPAEKAEGSTFLQMGASLEQQIVCMFKLMEEYDWGDFVVITSMWPGYETFVDYVRSYTDT
SYFLWRLQDILSLEMSVGTSDVRAKRMLQQIDSQVLLAYCSYEEAQYLFQVAGEVGLLGP
GYIWILPSLALGNTESPPPISFPVGLIGVITDHWRKSLRQRVREGVAIVAKGADSFRRHQ
GFLPEGHSDCNTPVTHINNNTLFRHMLNVTWERKDLSFNSDGYLTNPSMAIIALDRDRLW
DKVGTLERGILQVRYPVWPRYGSFLETVSDDRHLTVATLEERPFVIVENVDPDTGTCVRN
TVPCRRHIVGHSEPYTKLCCKGFCIDILKKLSRTIKFSYDLYLVTNGKHGKMISGIWNGM
IGEVFYRKADMAIGSLTINEERSEIIDFSVPFVETGISVMVARSNGTVSPSAFLEPYSPA
VWVMMFVMCLTVVAVTVFVFEYFSPVGYNRSLVSAKAPGGPTFTIGKSVWLLWGIVFNNS
VPIENPKGTTSKIMVLVWAFFAVIFLASYTANLAAFMIQEQYIDTVSGLSDKKFQKPQEH
YPPFRFGTVPNGSTERNIRSNYPDMHAHMVKYNQKGVEDALNSLKTGKLDAFIYDAAVLN
YMAGKDEGCKLVTIGSGKVFATTGYGIALQKDSRWKRPIDLALLQFLGDGDTQRLETVWL
SGICQNEKNEVMSSKLDIDNMAGVFYMLLVAMGLSLLVFAWEHLLYWKLRKKLDKSPRMD
FLLAISRGIYSCFNGVEEPDHPNLANSDLTTNYAQANMLKMLRTAKDLVNSAQVETSLDH
ATKTIEHWGRHGGNLPVHIPQQVTTEMVPGGFSHVTENTHTHLSPEHPLIPQYCTLGVVT
SLNRQKGLARPTPLRYTLPARTSSLYDRPLSVSSLSSPHLDLAGVDPLSSYSQPSTGRLY
VEPQHISHPRSPFIPYSELQLPDIYPFSHHPSAISHPSHTEPSRKNRRSKSLLSGESGGG
EWRRRRAEKTVCLGELRANHLQENNVSPQMPDSLYPGTMLCPGVEGCVGSWPLPLEELVL
AGRPRLHRRPSFLRATWGSERILQPDETLPTSLDCQSHSALPDLFPCVMADQETPTKLYN
PAPLRNNLCYPATSTRQHAYLHIRQDQRKGNGRKKLRYSNSTHLPTYREAMLGGQGGGGG
VGLGGVRRATNLLSRQYSHYLTSYPGLPLYHGPLDLQAHSQASSNHASPSPGTYPSPSPV
CQLLPCGGFRGQRGLLYQDSLYGAYGANGAYQEDQDPGLEPQRGDTSVGLRSEDRSCVTQ
PWGRVSSLESEV
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctgagaaggctgagggttccacgtttctccagatgggtgcctccctggagcag
cagatcgtctgcatgttcaagttgatggaggagtatgactggggagactttgtagtaatc
accagcatgtggccgggatatgagacgtttgtagactacgtccgatcctacacggacact
tcctacttcctatggaggctacaagatatcctgtctctggagatgtctgtcggaaccagt
gacgtccgagccaaacgcatgttacagcagattgattcccaggtgctcctggcctactgt
tcctatgaagaggcccagtacctgttccaggtagcaggcgaggtgggtctactggggcct
gggtacatctggatcctcccctccctcgcgttgggcaacacagagagccctccacctatc
agcttccctgtaggactgattggcgtcatcactgaccactggaggaagagcctgaggcaa
cgtgtcagagagggagtggccatagtggccaaaggggcggatagtttcagaaggcatcaa
gggttccttccagagggacacagcgactgcaacacaccagttacacatatcaacaacaac
acactgttcagacacatgctaaatgtgacatgggagcgtaaggatctgtcgttcaacagt
gatggctacctgaccaacccctccatggccatcatcgcactggacagagacagactgtgg
gacaaggtgggtacattagagcggggtatcctccaggtgcgttacccggtgtggcctcgc
tatggcagttttctggagacggtatcagatgaccgccacctgacggtagccactctggag
gagaggccttttgtcatcgtagaaaacgtggaccccgacacgggcacctgcgtacgcaac
accgtgccttgccgacgccatattgtgggccactcggagccctacaccaagctgtgctgt
aaggggttctgtatagacattctgaagaagctgtctcgcaccattaagttctcctacgac
ctctacctggtcactaacgggaaacatggaaagatgatcagtggcatctggaacggcatg
atcggagaggtgttctataggaaagcagacatggccataggttctctcaccataaatgag
gagcgttctgagatcatcgacttctccgtgcccttcgttgagacgggcatcagcgtcatg
gttgcccgtagcaatgggactgtctccccctccgccttccttgagccctatagcccagcg
gtgtgggtgatgatgtttgtaatgtgcctgaccgtggtcgctgtgactgtattcgtgttt
gagtacttcagtcctgtcgggtacaaccgaagcttggtcagtgccaaagcgcccggaggt
cctaccttcaccatagggaagtcagtgtggctactgtggggcatcgtgttcaataactca
gtccccattgagaaccctaaaggcacaaccagtaagatcatggtgttggtgtgggccttc
ttcgctgtcatcttcctggcctcctacactgccaacctggctgccttcatgatccaggag
cagtacatagacactgtgtctggactgtctgacaagaagttccagaagcctcaggagcac
taccctccattccgttttggtacggtccctaacggcagtacagagaggaacatcagaagt
aactaccctgacatgcacgcacacatggtcaaatacaaccagaaaggagtggaggatgcc
ctcaacagcctcaagacagggaagctggacgcattcatctatgatgctgcggtgttgaac
tacatggcagggaaggatgagggctgtaagcttgtgactatcggctctgggaaagtgttt
gccacgacaggctatggtatagccctgcagaaagattccagatggaaacgacccattgac
ctggccttgctgcagttcctgggagacggtgacacccagcgcttggagacggtctggctg
tcaggcatctgtcagaatgagaagaacgaggtgatgagtagtaagctggacatagataac
atggccggggtcttctacatgctactggtggccatggggctcagtctcttggtgtttgcc
tgggaacatctactctactggaaactacgcaagaaactagacaagtctcctcgcatggac
ttcctgctcgctatcagcaggggaatctacagttgcttcaacggggtggaggaaccagac
caccctaacctggcaaactcagatctgacaactaactacgcccaggctaacatgcttaag
atgttacgcaccgctaaagacctggtcaactctgcccaggtcgagacctcactggaccat
gccaccaagaccatagaacactggggtcgccatggcggcaatctgccagtccacattccg
cagcaggtcaccacggaaatggttccaggagggttttctcatgtcacagagaacacacac
acacacctgtcccccgagcaccccctcatcccgcaatactgcacgctgggtgtagtgact
tctctgaacaggcagaaggggctggcgagacccacgcccctacgatacacgctcccggct
cgcacttcctccctctacgacagaccactttctgtttctagtctcagtagccctcacctt
gacctggctggagtggaccccctctcttcctactctcaaccctccacaggtaggctgtat
gtggagccccagcacatctcccacccccgctctcctttcatcccctatagtgagcttcag
ctgccagacatctaccccttctctcaccacccctctgccatctcccatccatcccacaca
gaaccctccaggaagaataggaggagcaagagcctcctctcaggggaatcaggaggagga
gagtggaggaggcgcagggcggagaagacggtgtgtctgggtgaactccgggccaaccac
ctccaggagaacaacgtctcgccccagatgcccgactccctgtacccaggaacgatgctc
tgtcctggggtagaaggctgcgttggctcctggcctcttcccttggaggagctggttctg
gcaggcagaccaaggctccaccgacggccatctttcctccgagccacctgggggagtgag
cggattctccagccggacgaaactctgcctacatcccttgattgccaatcacattctgct
ttaccagacctgttcccctgcgtcatggccgaccaagaaactcccactaaactctacaac
cccgcccccctccggaacaacctatgctaccctgccacctcaactcgccagcatgcgtat
ctccatataaggcaggaccagaggaaagggaacggacgtaagaagctgcggtactcaaac
tccacccacctgcccacctacagggaggccatgctggggggtcagggaggcggagggggg
gtaggccttgggggggtccggagagccaccaacctgctcagcagacagtactcccactat
ctaacctcctaccctgggctgcctctctaccatggtcccctggacctccaggcccattcc
caggcatccagcaaccacgccagccccagccccggtacataccctagtcccagcccagta
tgccagctcttgccctgtggtggctttcgaggccagagggggttgctgtaccaggacagt
ctgtatggagcctatggggccaatggagcctaccaagaggaccaggatcctggcttagag
ccccagagaggagatacatcagtaggtttgaggtctgaggacagatcctgtgtgacccag
ccctggggacgcgtgtctagtctggagtcagaggtctga
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integrated database retrieval system
