Oncorhynchus mykiss (rainbow trout): 110498955
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Entry
110498955 CDS
T07259
Name
(RefSeq) paired box protein Pax-6-like isoform X13
KO
K08031
paired box protein 6
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110498955
Transcription factors [BR:
omy03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
110498955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
Homeodomain
Homeobox_KN
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
110498955
NCBI-ProteinID:
XP_021431372
Ensembl:
ENSOMYG00000001171
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All DBs
Position
2:88050098..88070895
Genome browser
AA seq
467 aa
AA seq
DB search
MPQKEYYNRATWESGVASMMQNKVYDYNEGHSGVNQLGGVFVNGRPLPDTTRQKIVELAH
SGARPCDISRILQTHGDAKVQVLDNENVSNGCVSKILGRYYETGSIRPRAIGGSKPRVAT
PEVVGKIAVYKRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSLSVSSINRVLRNLASEKQ
QMGADGMYEKLRMLNGQTGTWGTRPGWYPGTSVPGQPNPDGCPQSDGGGENTNSISSNGE
DSDETQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQ
VWFSNRRAKWRREEKLRNQRRQASNSSSHIPISSSFSTSVYQPIPQTTAPGWMSFSSGSM
LGRPDTALTNTYSALPPMPSFTMANNLPMQAPVSSQTSYSCMLPTSPSVNGRSYDTYTPP
HMQAHMNSQSMAGSGGNSTGLISPGVSVPVQVPGSEADMSQYWPRLQ
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgcctcaaaaagaatactataaccgggccacgtgggaatctggcgtcgcgtccatgatg
caaaacaaggtgtatgactataacgaaggtcacagcggagtgaatcagcttggcggagtg
ttcgtcaacggcagacccctgcccgacaccaccagacagaaaatagtcgagcttgctcac
agtggcgcgcggccgtgcgatatatccaggattctgcagacccatggtgatgcaaaagtt
caagtgctggacaatgaaaacgtgtcaaacggctgtgtgagtaagattctgggcagatac
tatgaaaccggctccatcagaccaagggcgatcgggggtagcaaaccaagagtagcaact
cccgaggtggtcggaaaaattgcagtatacaagagggagtgcccgtcaatcttcgcgtgg
gaaattcgtgacagactgctatccgagggggtctgcacaaacgataatatacccagtgta
agttcattgagtgtgtcgtcgataaacagagtactgcgcaacctggctagcgagaagcaa
cagatgggcgcagatggcatgtatgagaagttgagaatgctgaacggtcagactgggacg
tgggggacccgcccgggctggtaccccggaacctctgtgccaggacagcccaacccagat
ggttgtccacagtcagacggtggaggtgagaacactaattcaataagttcgaatggagaa
gactcggatgagacccaaatgagacttcagctcaaaagaaaattgcaaaggaaccgcact
tcgttcacacaagaacagatagaagcgcttgagaaagagtttgaaagaactcactatcca
gatgttttcgcaagggaaagacttgctgcaaaaattgacctcccagaggccagaatacag
gtgtggttttcaaatagaagggcaaagtggaggagggaggagaaattacggaatcaaaga
cgacaagccagtaactcttccagtcacatccctatcagcagcagtttcagcaccagtgtc
taccagcccatcccacagaccacagcaccaggttggatgtcgttctcatcaggatccatg
ttgggacgaccagacacagcccttacaaacacatacagtgccctgccacctatgccaagc
ttcaccatggccaacaacctgcctatgcaagcccctgtgtccagccagacctcctactcc
tgcatgctgcccaccagtccctcagtcaacggacggagctacgacacgtacacccctcct
catatgcaggcacatatgaacagccaatcaatggctggttcaggaggcaactcaacaggt
ctcatctctcctggagtatctgttcctgttcaagtaccaggcagtgaagcagacatgtcc
cagtactggcccaggctacagtag
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