Oncorhynchus mykiss (rainbow trout): 110499028
Help
Entry
110499028 CDS
T07259
Name
(RefSeq) VPS35 endosomal protein sorting factor-like isoform X1
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110499028
Membrane trafficking [BR:
omy04131
]
Protein recycling
Others
Retriever complex
110499028
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
110499028
NCBI-ProteinID:
XP_036811769
Ensembl:
ENSOMYG00000044207
LinkDB
All DBs
Position
20:complement(14529014..14544454)
Genome browser
AA seq
973 aa
AA seq
DB search
MAAVQWHSRARRYESELQSCGLEVAPVEFSDYHPLKSITVTDSKSRRGARKGSTSSSSSS
SSSVAPDPLSSMLDGTDPLSMFAAASASESPLTLSQSSSTGDLGRGKRREKEDEVGVDFE
PWSSKRGEILARFTTTEKLSINLFMGSEKGKAPSLASSSAVSEKVRTRLEELDDLEEGSQ
RELLNLSQQDYVNRIEELNQSLKEAWASDQKVKALKIVIQCSKLLSDTAVIQFYPSKFVL
ITDILDTFGRLVYERIWSMCSDPRPLPDYSPDSFTADEVNDTAKETCLNWFFKIASIREL
IPRLYVEVALLKCNRFLTKCGIQETVPRLTAMIRGIGDPLVAVYARAYLCRIGMEVAPHL
KDSLNKNFFDLLGTFRQIHGDSVQNQLVLQRVEIPVYLTLYSPAIHWILQCVSYRAPEAL
LTEMMERCKKLGNNALLLNSVMWAFRAEFIATRATDFIGMIKDCDEAGFPKHLLFGSLGR
SLACADPPEAERLPILNEAWKVITKVRSPQDYINCAEIWVEFTCRHFTKREVNTVLSDII
KHMTPDRAFEDAYPQLQSVIRKILTYFHDFSVLFSMERFLPFMDMFQKDSVRVGVCLSIM
DVFIKHQQEPTRDPVILNALLHVCKTMHDSVNALTLEDEKRSLALLINGFIRMVSFGRDF
EQQLSFCVEARATFCNLEPVLVQLIHTVNQLAMETRRVMRGSHSRKTAAFVRACAAYSFI
TIPSLTSIFSRLNLYLLSGQVALANQCLSQADAFLKAAVSVLPEVPRSISIEGKLRSSEG
FLLDFINNFLSALLVVPDHPEAGVLFLVRGLLNMVQDYTWEDNSDAKVHVYISALPLLAA
MSQESYLYSIPKVDSNETLYGGDPKFLAEINKLCETLIGQVLDHLKTLGRDESVHRQGSL
AFSLFGCLLAHGDLRNNKLNQLAVNLWNLSHKQGYCNTRTSVRTLEFIKHQAQQPDMAYL
SDMLHRLTLQSRT
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgtgcagtggcactctcgtgcacgcaggtatgagtctgaactgcagagctgt
ggcctggaggttgccccagtggagtttagcgactaccatcccctcaagtccatcactgtg
acagactccaagtcgcggaggggagcgcgtaaaggcagcacctcctcctcttcctcctct
tccagctctgtggcaccagatcccctgagctccatgctggatggaacggaccccctgtcc
atgtttgccgcagcctctgccagcgagtcccctctaaccctctcacagagcagctctact
ggggacttgggtagaggaaagaggagggagaaggaggatgaggttggagtggactttgaa
ccgtggtcatccaaacggggagaaatccttgccaggttcactaccacggagaagctctcc
attaatctcttcatgggctcagagaaaggcaaggctcccagtcttgcctcctcctctgct
gtatcggagaaggtgcgaactcgcctagaggagctggatgacctggaagaggggtctcag
cgggagctgctgaatctgtcccagcaggactatgtgaaccgtatcgaggagctaaaccag
tctctaaaagaggcctgggcctccgaccagaaggtcaaggccctcaagatcgtcatccag
tgctccaagctgctgtcagacacagctgtgattcagttctacccaagcaagtttgtcctc
atcacagacattctggacacctttggacgtctggtgtatgagaggatctggtccatgtgt
tctgaccctcgccccctaccagattactctccagactcctttacagctgatgaagtgaat
gacacggccaaggagacctgcctcaactggttcttcaaaattgcctccatcagagagctc
atcccacgactatatgtcgaggtagctctcctgaagtgtaaccgtttcttgaccaagtgt
gggatccaagagacggtgcctcgcctcacagctatgatccgggggataggggaccccctg
gtggccgtgtatgcccgggcctacctctgtcggattgggatggaggtggctcctcacctg
aaggacagcctgaacaagaacttctttgacctgctggggacgttccgtcagatccatggc
gacagtgtccagaaccagctggtcctgcagagggtggagatccccgtctacctgaccctc
tactcccccgccatccactggatcctacagtgtgtctcctacagagcaccagaggccctg
ctaacagagatgatggagagatgcaaaaagcttgggaataatgccctgctgctgaactcg
gtgatgtgggcgttcagggcggagtttatcgcgacgagagccaccgacttcatcggcatg
atcaaggactgtgatgaggcaggattccctaagcacctgttgtttggctctctgggccgc
agcctggcctgtgctgaccctcctgaggcggaaaggctgcccatcctcaatgaggcctgg
aaggtcatcaccaaagtgcgaagtccacaggattacatcaactgtgctgagatctgggtg
gagttcacctgtcgtcacttcactaaacgtgaggtcaacactgtgctctctgacatcatc
aagcacatgaccccagaccgggcctttgaggatgcctatcctcagcttcagtctgtgata
cggaagatcctcacctactttcatgacttctctgtcctcttctccatggagcgtttcctt
cccttcatggacatgttccagaaggacagcgtcagggtgggggtgtgtctctccatcatg
gacgtcttcatcaaacaccagcaggagcccactagagatcctgtcatcctcaacgctcta
ctccacgtctgcaagaccatgcacgactctgtcaatgctctgacgctggaggacgagaag
agatctctggccttgttgatcaatggcttcatacgcatggtgtcgtttggccgtgacttt
gagcagcagctgagtttctgtgtggaggcccgggccaccttctgtaacctggagccagtg
ttggtgcagctcatccacactgtgaaccagctggccatggagacgaggcgtgtgatgagg
gggagccactcccgcaagactgctgcttttgtcagggcatgtgctgcatacagcttcatc
accattccctccctcaccagcatcttcagccgcctcaacctctacctgctgtctgggcag
gtggccctggccaaccagtgtctttcccaggcggatgcattcctgaaggcagcggtcagt
gtgttgccagaggtgccacgcagtatcagtatcgagggcaaactgcgctcttctgagggc
ttcctgcttgacttcatcaacaacttcctgtcagcactactagttgtgccggaccatcca
gaggcaggggtgttgttccttgtgcgtgggctgctcaacatggtgcaggactacacctgg
gaggacaacagtgacgccaaggtccatgtctacatcagcgccctgccactactggctgcc
atgagtcaggagagctacctctactccatccccaaagtggactcgaatgaaacactttat
ggaggagatcccaagtttttggcagagatcaacaagttatgtgaaactctgattggacaa
gtgctggaccacctcaagaccttgggtagagatgagagtgtccatagacagggtagtctg
gccttctctctgtttggctgcctcctagctcacggggacctacgcaacaacaaactcaac
cagctggctgtcaacctgtggaatctgagccacaagcagggttactgcaacacacgcacc
tccgtgcggacattagagttcatcaagcaccaggcccagcagccagacatggcttacctt
tcagacatgctccaccgcctcaccttgcagtccaggacctga
DBGET
integrated database retrieval system
