Oncorhynchus mykiss (rainbow trout): 110499044
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Entry
110499044 CDS
T07259
Name
(RefSeq) transcription factor Sox-9-A
KO
K18435
transcription factor SOX9 (SOX group E)
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110499044
Transcription factors [BR:
omy03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
110499044
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox_N
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
110499044
NCBI-ProteinID:
XP_021431550
Ensembl:
ENSOMYG00000045131
LinkDB
All DBs
Position
20:15278768..15282727
Genome browser
AA seq
491 aa
AA seq
DB search
MNLLDPFLKMTDEQDKCLSDAPSPGMSEDSAGSPCPSGSGSDTENTRPSENGLLMGPDGP
LVEFKKDDDDKFPVCIRDAVSQVLKGYDWTLVPMPVRVNGSSKNKPHVKRPMNAFMVWAQ
AARRKLADQYPHLHNAELSKTLGKLWRLLNEGEKRPFVEEAERLRVQHKKDHPDYKYQPR
RRKSMKNGQSESEDGSEQTHISPGAIFKALQQADSPASSIGEVHSPGEHSGQSQGPPTPP
TTPKTDIQVGKVDLKREGRPLQEGTGRQLNIDFRDVDIGELSSDVISHIDTFDVNEFDQY
LPPNGHPGAPGTAAGQVSYNGTYGISSSAVSQAAGGTAGHSWMTKTQSQQQHSLTTLGSG
GEQGQNQRTPTHIKTEQLSPSHYNDQQNSSPPQHVTYGSFNLQHYSSSSYPSITRAQYDF
SDHQVGTNSYYSHAAGGQGSGLYSFSSYMSPSQRPMYTPIADTTGVPSVPQTLSPQHHWD
QQPVYTQLSRP
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgaatctactcgaccccttcctgaaaatgacagacgaacaagacaaatgtctctctgac
gcaccgagcccgggcatgtccgaggactctgcgggatccccgtgcccttccggctctggc
tcagacaccgagaacaccagaccttcagagaacggtctgctgatgggtccggacggtccc
ctcgtcgagttcaagaaggacgacgatgacaagttccccgtgtgcatccgcgacgctgtg
tcccaggtgctgaagggctacgactggaccctggtgccaatgccagtccgagtgaacgga
tctagtaagaacaagccccacgtcaagagaccgatgaacgcgtttatggtttgggcgcaa
gccgctcggagaaaactggctgatcagtaccctcatctgcataacgcggagctgagcaaa
actctggggaaactatggaggcttctcaatgagggagagaagcgtccgttcgtggaggag
gcagagcgcttgagggtacagcacaagaaagaccaccccgactacaagtaccagccccgg
agaaggaagtccatgaagaacggacaaagcgagtctgaggacggcagcgagcagacgcac
atatcgccaggagcgatcttcaaggcgctccagcaagctgactctccagcctctagcata
ggagaagtgcactccccgggagaacactcaggccagtcccaagggccccccacccctccc
accacacctaagaccgacatccaagtgggaaaggtggacctgaagcgtgagggtcgcccc
ttacaggaaggcacgggccgtcagctcaacattgatttccgggatgtggacatcggtgag
ctgagcagcgacgtaatctcccacatcgataccttcgatgtcaacgagtttgaccagtac
ctgccccccaacggtcacccaggcgctcctggcactgccgctggccaggtctcctacaac
ggtacctatggcatcagcagctccgcagtcagccaggcagcagggggcaccgcagggcac
agctggatgaccaagacccagagtcagcagcagcactccctgaccacgctgggtagtgga
ggggagcagggccagaaccagaggacccccacacacatcaagacagagcagctgagcccc
agccactacaacgatcagcagaactcctcccccccgcagcacgtcacctacggctccttc
aacctgcaacactacagctcttcctcctacccctccatcacccgcgcccagtatgacttt
tctgaccaccaggtcggcaccaactcctactacagccacgcagctgggggccagggctca
gggctctactccttcagcagctacatgagccccagccagaggcccatgtacacccccatc
gcagacacaacaggagtgccctccgtgccacagaccctcagtccccagcatcactgggac
cagcagccagtgtacacacagctctcccggccctga
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