Oncorhynchus mykiss (rainbow trout): 110499053
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Entry
110499053 CDS
T07259
Name
(RefSeq) transcription factor Sox-8 isoform X1
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110499053
Transcription factors [BR:
omy03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
110499053
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox_N
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
110499053
NCBI-ProteinID:
XP_021431560
Ensembl:
ENSOMYG00000005426
UniProt:
A0A8C7NPJ4
LinkDB
All DBs
Position
20:16082734..16085908
Genome browser
AA seq
471 aa
AA seq
DB search
MTEEKSKSFSDHPCSPTGTASSMSQDDSDSDVPSSPTGSDGQAPGNGITPKMDTSEEDKR
FPACIRDAVSQVLNGYDWSLVPMPTRGDRSLKNKPHVKRPMNAFMVWAQAARRKLADQYP
HLHNAELSKTLGKLWRLLSESEKRPFMEEAERLRVQHKKDYPDYKYQPRRRKSTKPGQCN
SDSGAELAQFHPGQMYKAEPGLARLISMGNGHNHPERTGHPHGPPTPPTTPKTELYLGLK
HDGRRPLDGGRQNIDFSNLDISELSTDVISNMDAFDVHEFDQYLPLNKHSSAPAPPDHGH
GGHGSNPPSGSLSSSYGHSHSNALPWGPKGAGAEAALPSSSSSSSNSDGLHHRTPIKTEQ
LSPSHYSSQHSHSSSPPHPDYAPLSSGGGPSSAAPSSSSSQPSPQCDYADLQSPSYYSAY
SSYPAGLYQYPYFHSSRHPYGKPLINSVAIPPPHSPTSNWEQPVYTTLTRP
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaggaaaagagtaagtcattcagcgaccatccatgtagtccaacgggaaccgcc
agctcgatgtcgcaggacgactcggattcggacgtcccgtcctctccaaccggctccgat
ggacaggcgcccggcaacgggataaccccaaaaatggacaccagcgaggaagataaacgg
tttcccgcgtgcatccgagacgcagtgtctcaggtgcttaacggatacgactggtcgctc
gtaccgatgcctacacgaggagaccggtctctgaaaaacaaaccccatgtgaagcggccg
atgaacgcgttcatggtgtgggcgcaagcggcgcgcaggaaactagctgaccagtacccg
catctccacaacgccgaactcagcaagaccttggggaagctctggcgcctgctctctgaa
agcgagaagaggccatttatggaggaggcagagagactgagggtgcaacacaagaaagac
taccctgactacaaataccaaccccggagaaggaagagcaccaagccaggtcagtgtaac
tccgactccggggctgagctggcccaattccacccaggccagatgtacaaggctgaacct
ggtctggccagactgatctctatggggaatgggcataatcatccagagcggacaggccat
ccacatggtccccccacaccccccaccacccccaagacagagctgtatcttgggctgaaa
catgatggccggcgccccctggatgggggacggcagaacatcgacttcagcaacttggac
atctctgagctgagcaccgatgtcatcagcaacatggatgcctttgacgtccatgagttc
gaccagtacctgccactcaacaagcacagctccgccccggcgcctccggaccatgggcac
gggggtcacggatccaaccccccctctgggtccctcagctcctcctacggccactcccac
agcaatgccttgccttggggtccaaaaggggcgggagcggaggcggcgctcccctcttcc
tcctcgtcttctagtaacagcgatggccttcaccacagaacgccgatcaaaacggagcag
ttgagtcccagccactacagcagccagcactcccacagctcctcgccaccccaccccgac
tacgcccccctcagctctggaggcggcccctcctctgcagccccctcatcctcctcctcc
cagcccagcccccagtgtgactatgcagacctccagagccccagctactacagtgcctac
tccagctaccccgcaggtctctatcagtacccctacttccactcctctcgtcacccctac
ggcaaaccgctcatcaacagcgtagccatccctccgccccacagccccacctcaaattgg
gagcagccggtctataccacactcaccaggccttag
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